Methods and compositions for the treatment of pancreatitis

The present invention includes methods and compositions for the treatment of acute pancreatitis. In a preferred embodiment the invention concerns the use of agents to reduce or prevent the secretion of pancreatic digestive enzymes within the pancreas. Such agents are targeted to pancreatic cells, and serve to prevent the exocytotic fusion of vesicles containing these enzymes with the plasma membrane. The invention is also concerned with methods of treating a mammal suffering from pancreatitis through the administration of such agents.

Pancreatitis is a serious medical condition involving an inflammation of the pancreas. In acute or chronic pancreatitis the inflammation manifests itself in the release and activation of pancreatic enzymes within the organ itself, leading to autodigestion. In many cases of acute pancreatitis, the condition can lead to death.

In normal mammals, the pancreas, a large gland similar in structure to the salivary gland, is responsible for the production and secretion of digestive enzymes, which digest ingested food, and bicarbonate for the neutralization of the acidic chyme produced in the stomach. The pancreas contains acinar cells, responsible for enzyme production, and ductal cells, which secrete large amounts of sodium bicarbonate solution. The combined secretion product is termed “pancreatic juice”; this liquid flows through the pancreatic duct past the sphincter of Oddi into the duodenum. The secretion of pancreatic juice is stimulated by the presence of chyme in the upper portions of the small intestine, and the precise composition of pancreatic juice appears to be influenced by the types of compounds (carbohydrate, lipid, protein, and/or nucleic acid) in the chyme.

The constituents of pancreatic juice includes proteases (trypsin, chymotrypsin, carboxypolypeptidase), nucleases (RNAse and DNAse), pancreatic amylase, and lipases (pancreatic lipase, cholesterol esterase and phospholipase). Many of these enzymes, including the proteases, are initially synthesized by the acinar cells in an inactive form as zymogens: thus trypsin is synthesized as trypsinogen, chymotrypsin as chymotypsinogen, and carboxypolypeptidase as procarboxypolypeptidase. These enzymes are activated according to a cascade, wherein, in the first step, trypsin is activated through proteolytic cleavage by the enzyme enterokinase. Trypsinogen can also be autoactivated by trypsin; thus one activation has begun, the activation process can proceed rapidly. Trypsin, in turn, activates both chymotypsinogen and procarboxypolypeptidase to form their active protease counterparts.

The enzymes are normally activated only when they enter the intestinal mucosa in order to prevent autodigestion of the pancreas. In order to prevent premature activation, the acinar cells also co-secrete a trypsin inhibitor that normally prevents activation of the proteolytic enzymes within the secretory cells and in the ducts of the pancreas. Inhibition of trypsin activity also prevents activation of the other proteases.

Pancreatitis can occur when an excess amount of trypsin saturates the supply of trypsin inhibitor. This, in turn, can be caused by underproduction of trypsin inhibitor, or the overabundance of trypsin within the cells or ducts of the pancreas. In the latter case, pancreatic trauma or blockage of a duct can lead to localized overabundance of trypsin; under acute conditions large amounts of pancreatic zymogen secretion can pool in the damaged areas of the pancreas. If even a small amount of free trypsin is available activation of all the zymogenic proteases rapidly occurs, and can lead to digestion of the pancreas (acute pancreatitis) and in particularly severe cases to the patient's death.

Pancreatic secretion is normally regulated by both hormonal and nervous mechanisms. When the gastric phase of stomach secretion occurs, parasympathetic nerve impulses are relayed to the pancreas, which initially results in acetylcholine release, followed by secretion of enzymes into the pancreatic acini for temporary storage.

When acid chyme thereafter enters the small intestine, the mucosal cells of the upper intestine release a hormone called secretin. In humans, secretin is a 27 amino acid (3400 Dalton) polypeptide initially produced as the inactive form prosecretin, which is then activated by proteolytic cleavage. Secretin is then absorbed into the blood. Secretin causes the pancreas to secrete large quantities of a fluid containing bicarbonate ion. Secretin does not stimulate the acinar cells, which produce the digestive enzymes. The bicarbonate fluid serves to neutralize the chyme and to provide a slightly alkaline optimal environment for the enzymes.

Another peptide hormone, cholecystokinin (CCK) is released by the mucosal cells in response to the presence of food in the upper intestine. As described in further detail below, human CCK is synthesized as a protoprotein of 115 amino acids. Active CCK forms are quickly taken into the blood through the digestive tract, and normally stimulate the secretion of enzymes by the acinar cells. However, stimulation of the CCK receptor by the CCK analogs cerulein and CCK-octapeptide (CCK-8) appears to lead to a worsening of morbidity and mortality in mammals in whom pancreatitis is induced. See Tani et al., Pancreas 5:284-290 (1990).

As indicated above, the digestive enzymes are synthesized as zymogens; proto-enzyme synthesis occurs in the rough endoplasmic reticulum of the acinar cells. The zymogens are then packaged within vesicles having a single lipid bilayer membrane. The zymogens are packed within the vesicles so densely that they appear as quasi-crystalline structures when observed under light microscopy and the zymogen granules are electron-dense when observed under the electron microscope. The vesicles are localized within the cytoplasm of the acinar cells. Secretion of zymogens by the acinar cells occurs through vesicle docking and subsequent fusion with the plasma membrane, resulting in the liberation of the contents into the extracellular milieu.

Nerve cells appear to secrete neurotransmitters and other intercellular signaling factors through a mechanism of membrane fusion that is shared with other cell types, see e.g., Rizo & Sudhof, Nature Struct. Biol. 5:839-842 (October 1998), hereby incorporated by reference herein, including the pancreatic acinar cells.

Although the Applicants do not wish to be bound by theory, it is believed that a vesicle first contacts the intracellular surface of the cellular membrane in a reaction called docking. Following the docking step the membrane fuses with and becomes part of the plasma membrane through a series of steps that currently remain relatively uncharacterized, but which clearly involve certain vesicle and membrane-associated proteins, as has been illustrated using neural models.

In neurons, neurotransmitters are packaged within synaptic vesicles, formed within the cytoplasm, then transported to the inner plasma membrane where the vesicles dock and fuse with the plasma membrane. Recent studies of nerve cells employing clostridial neurotoxins as probes of membrane fusion have revealed that fusion of synaptic vesicles with the cell membrane in nerve cells depends upon the presence of specific proteins that are associated with either the vesicle or the target membrane. See id. These proteins have been termed SNAREs. As discussed in further detail below, a protein alternatively termed synaptobrevin or VAMP (vesicle-associated membrane protein) is a vesicle-associated SNARE (v-SNARE). There are at least two isoforms of synaptobrevin; these two isoforms are differentially expressed in the mammalian central nervous system, and are selectively associated with synaptic vesicles in neurons and secretory organelles in neuroendocrine cells. The target membrane-associated SNAREs (t-SNARES) include syntaxin and SNAP-25. Following docking, the VAMP protein forms a core complex with syntaxin and SNAP-25; the formation of the core complex appears to be an essential step to membrane fusion. See Rizo & Sudhof, id. and Neimmann et al., Trends in Cell Biol. 4:179-185 (May 1994), hereby incorporated by referenced herein.

Recently evidence has increasingly indicated that the SNARE system first identified in neural cells is a general model for membrane fusion in eukaryotic cells. A yeast exocytotic core complex similar to that of the synaptic vesicles of mammalian neural cells has been characterized, and found to contain three proteins: Sso 1 (syntaxin 1 homolog), SncI (synaptobrevin homolog), and sec9 (SNAP-25 homolog). Rizo & Sudhof, id. These proteins share a high degree of amino acid sequence homology with their mammalian synaptosomal counterparts.

All mammalian non-neuronal cells appear to contain cellubrevin, a synaptobrevin analog—this protein is involved in the intracellular transport of vesicles, and is cleaved by TeTx, BoNT/E, BoNT/F, and BoNT/G. Homologs of syntaxin have been identified in yeast (e.g., sso1p and sso2p) and mammalian non-neuronal cells (syn2p, syn3p, syn4p and syn5p). Finally, as indicated above, a yeast SNAP-25 homolog, sec9 has been identified; this protein appears to essential for vesicle fusion with the plasma membrane.

Intoxication of neural cells by clostridial neurotoxins exploits specific characteristics of the SNARE proteins. These neurotoxins, most commonly found expressed in Clostridium botulinum and Clostridium tetanus , are highly potent and specific poisons of neural cells. These Gram positive bacteria secrete two related but distinct toxins, each comprising two disulfide-linked amino acid chains: a light chain (L) of about 50 KDa and a heavy chain (H) of about 100 KDa, which are wholly responsible for the symptoms of botulism and tetanus, respectively.

The tetanus and botulinum toxins are among the most lethal substances known to man; both toxins function by inhibiting neurotransmitter release in affected neurons. The tetanus neurotoxin (TeNT) acts mainly in the central nervous system, while botulinum neurotoxin (BoNT) acts at the neuromuscular junction; both toxins inhibit acetylcholine release from the nerve terminal of the affected neuron into the synapse, resulting in paralysis or reduced target organ function.

The tetanus neurotoxin (TeNT) is known to exist in one immunologically distinct type; the botulinum neurotoxins (BONT) are known to occur in seven different immunologically distinct serotypes, termed BoNT/A through BoNT/G. While all of these latter types are produced by isolates of C. botulinum , two other species, C. baratii and C. butyricum also produce toxins similar to /F and /E, respectively. See e.g., Coffield et al., The Site and Mechanism of Action of Botulinum Neurotoxin in Therapy with Botulinum Toxin 3-13 (Jankovic J. & Hallett M. eds. 1994), the disclosure of which is incorporated herein by reference.

Regardless of type, the molecular mechanism of intoxication appears to be similar. In the first step of the process, the toxin binds to the presynaptic membrane of the target neuron through a specific interaction between the heavy chain and a neuronal cell surface receptor; the receptor is thought to be different for each type of botulinum toxin and for TeNT. The carboxy terminal (C-terminal) half of the heavy chain is required for targeting of the toxin to the cell surface. The cell surface receptors, while not yet conclusively identified, appear to be distinct for each neurotoxin serotype.

In the second step, the toxin crosses the plasma membrane of the poisoned cell. The toxin is first engulfed by the cell through receptor-mediated endocytosis, and an endosome containing the toxin is formed. The toxin (or light chain thereof) then escapes the endosome into the cytoplasm of the cell. This last step is thought to be mediated by the amino terminal (N-terminal) half of the heavy chain, which triggers a conformational change of the toxin in response to a pH of about 5.5 or lower. Endosomes are known to possess a proton pump that decreases intra-endosomal pH. The conformational shift exposes hydrophobic residues in the toxin, which permits the toxin to embed itself in the endosomal membrane. The toxin then translocates through the endosomal membrane into the cytosol.

Either during or after translocation the disulfide bond joining the heavy and light chain is reduced, and the light chain is released into the cytoplasm. The entire toxic activity of botulinum and tetanus toxins is contained in the light chain of the holotoxin; the light chain is a zinc (Zn++) endopeptidase which selectively cleaves the SNARE proteins essential for recognition and docking of neurotransmitter-containing vesicles with the cytoplasmic surface of the plasma membrane, and fusion of the vesicles with the plasma membrane. The light chain of TxNT, BoNT/B, BoNT/D, BoNT/F, and BoNT/G cause specific proteolysis of VAMP, an integral protein. During proteolysis, most of the VAMP present at the cytosolic surface of the synaptic vesicle is inactivated as a result of any one of these cleavage events. Each toxin cleaves a different specific peptide bond.

BoNT/A and /E selectively cleave the plasma membrane-associated SNARE protein SNAP-25; this protein is bound to and present on the cytoplasmic surface of the plasma membrane. BoNT/C1 cleaves syntaxin, which exists as an integral protein having most of its mass exposed to the cytosol. Syntaxin interacts with the calcium channels at presynaptic terminal active zones. See Tonello et al., Tetanus and Botulism Neurotoxins in Intracellular Protein Catabolism 251-260 (Suzuki K & Bond J. eds. 1996), the disclosure of which is incorporated by reference as part of this specification. Bo/NTCl also appears to cleave SNAP-25.

Both TeNT and BoNT are specifically taken up by cells present at the neuromuscular junction. BONT remains within peripheral neurons and, as indicated above, blocks release of the neurotransmitter acetylcholine from these cells.

By contrast TeNT, through its receptor, enters vesicles that move in a retrograde manner along the axon to the soma, and is discharged into the intersynaptic space between motor neurons and the inhibitory neurons of the spinal cord. At this point, TeNT binds receptors of the inhibitory neurons, is again internalized, and the light chain enters the cytosol to block the release of the inhibitory neurotransmitters 4-aminobutyric acid (GABA) and glycine from these cells. Id.

International Patent Publication No. WO 96/33273 relates to derivatives of botulinum toxin designed to prevent neurotransmitter release from sensory afferent neurons to treat chronic pain. Such derivatives are targeted to nociceptive neurons using a targeting moiety that binds to a binding site of the surface of the neuron.

International Patent Publication No. 98/07864 discusses the production of recombinant toxin fragments that have domains that enable the polypeptide to translocate into a target cell or which increase the solubility of the polypeptide, or both.

The present invention concerns methods and compositions useful for the treatment of acute pancreatitis. This condition is largely due to the defective secretion of zymogen granules by acinar cells, and by the premature co-mingling of the secreted zymogens with lysosomal hydrolysates capable of activating trypsin, thereby triggering the protease activation cascade and resulting in the destruction of pancreatic tissue.

In one embodiment of this aspect, the invention is a therapeutic agent comprising a chimeric protein containing an amino acid sequence-specific endopeptidase activity which will specifically cleave at least one synaptic vesicle-associated protein selected from the group consisting of SNAP-25, syntaxin or VAMP, in combination with the translocation activity of the N-terminus of a clostridial neurotoxin heavy chain, wherein the chimeric protein further comprises a recognition domain which will bind a human cholecystokinin (CCK) receptor. Upon binding of the recognition domain of the protein to the CCK receptor, the protein is specifically transported into cells containing CCK receptors (pancreatic acinar cells) through receptor-mediated endocytosis. In a preferred embodiment, the CCK receptor is the CCK A receptor.

Once inside the acinar cell, the chimeric protein functions in a manner similar to that of a clostridial neurotoxin within its target neuron. The toxin moiety is translocated from the endosome into the cytoplasm, where it acts to cleave a SNARE protein identical or homologous to SNAP-25, syntaxin or VAMP. The cleavage of this protein prevents formation of a core complex between the SNARE proteins and thus prevents or reduces the extent of fusion of the vesicle with the target membrane. This, in turn, results in inhibition of zymogen release from the acinar cells and of zymogen activation by lysosomal hydrolases. The autodigestion of pancreatic tissue in acute pancreatitis is therefore reduced or eliminated.

Another embodiment of the present invention concerns a method of treating a patient suffering from acute pancreatitis by administering an effective amount of such a chimeric protein.

Another embodiment of the invention concerns a therapeutic composition that contains the translocation activity of a clostridial neurotoxin heavy chain in combination with a recognition domain able to bind a specific cell type and a therapeutic element having an activity other than the endopeptidase activity of a clostridial neurotoxin light chain. A non-exclusive list of certain such therapeutic elements includes: hormones and hormone-agonists and antagonists, nucleic acids capable being of being used as replication, transcription, or translational templates (e.g., for expression of a protein drug having the desired biological activity or for synthesis of a nucleic acid drug as an antisense agent), enzymes, toxins, and the like.

In a preferred embodiment, the specific cell type is a pancreatic cell, most preferably a pancreatic acinar cell.

Another embodiment is drawn to methods for the treatment of acute pancreatitis comprising contacting an acinar cell with an effective amount of a composition comprising a chimeric protein containing an amino acid sequence-specific endopeptidase activity which will specifically cleave at least one synaptic vesicle-associated protein selected from the group consisting of SNAP-25, syntaxin or VAMP, in combination with the translocation activity of the N-terminus of a clostridial neurotoxin heavy chain, wherein the chimeric protein further comprises a recognition domain able to bind to a cell surface protein characteristic of an human pancreatic acinar cell. Preferably the cell surface protein is a CCK receptor protein; most preferably the protein is the human CCK A protein. CCK receptors (CCK-A receptor and CCK-B receptor) are found mainly in on the surface of pancreatic acinar cells, although they are also found in some brain cells and, to a lesser extent on the surface of gastrointestinal cells.

Any suitable route of administration may be used in this aspect of the invention. Applicants currently prefer to administer the therapeutic agent in an intravenous infusion solution; however methods such as ingestion (particularly when associated with neurotoxin-associated proteins (NAPs); see Sharma et al., J. Nat. Toxins 7:239-253(1998), incorporated by reference herein), direct delivery to the pancreas, injection and the like may also be used. The agent is substantially specifically targeted to pancreatic cells; when the agent contains a CCK receptor-binding domain, the blood-brain barrier prevents the agent from interacting with brain cells.

In yet another embodiment the invention provides a composition comprising a drug or other therapeutic agent having an activity other than that of a clostridial neurotoxin light chain for intracellular delivery, said agent joined to the translocation domain of a clostridial neurotoxin heavy chain and a binding element able to recognize a cell surface receptor of a target cell. In a preferred embodiment, the target cell is not a neuron. Also, in this embodiment it is preferred that the drug or other therapeutic agent has an enzymatic, catalytic, or other self-perpetuating mode of activity, so that the effective dose of drug is greater than the number of drug molecules delivered within the target cell. A non-exclusive list of certain such drugs would include: hormones and hormone-agonists and antagonists, nucleic acids capable being of being used as replication, transcription, or translational templates (e.g., for expression of a protein drug having the desired biological activity or for synthesis of a nucleic acid drug as an antisense agent), enzymes, toxins (such as diphtheria toxin or ricin), and the like.

In this embodiment the drug may be cleavably linked to the remainder of the composition in such a way as to allow for the release of the drug from the composition within the target cell.

The presently claimed compositions may be provided to the patient by intravenous administration, may be administered during surgery, or may be provided parenterally.

WO 95/32738, which is shares ownership with the present application, describes transport proteins for the therapeutic treatment of neural cells. This application is incorporated by reference herein as part of this specification.

In a basic and presently preferred form, the invention comprises a therapeutic polypeptide comprising three features: a binding element, a translocation element, and a therapeutic element.

The binding element is able to bind to a specific target cell provided that the target cell is not a motor neuron or a sensory afferent neuron. Preferably, the binding element comprises an amino acid chain; also an independently, it is preferably located at or near the C-terminus of a polypeptide chain. By “binding element” is meant a chemical moiety able to preferentially bind to a cell surface marker characteristic of the target cell under physiological conditions. The cell surface marker may comprise a polypeptide, a polysaccharide, a lipid, a glycoprotein, a lipoprotein, or may have structural characteristics of more than one of these. By “preferentially interact” is meant that the disassociation constant (Kd) of the binding element for the cell surface marker is at least one order of magnitude less than that of the binding element for any other cell surface marker. Preferably, the disassociation constant is at least 2 orders of magnitude less, even more preferably the disassociation constant is at least 3 orders of magnitude less than that of the binding element for any other cell surface marker to which the therapeutic polypeptide is exposed. Preferably, the organism to be treated is a human.

In one embodiment the cell surface receptor comprises the histamine receptor, and the binding element comprises an variable region of an antibody which will specifically bind the histamine receptor.

In an especially preferred embodiment, the cell surface marker is a cholecystokinin (CCK) receptor. Cholecystokinin is a bioactive peptide that functions as both a hormone and a neurotransmitter in a wide variety of physiological settings. Thus, CCK is involved in the regulation of gall bladder contraction, satiety, gastric emptying, and gut motility; additionally it is involved in the regulation of pancreatic exocrine secretion.

There are two types of CCK receptors, CCK A and CCK B; the amino acid sequences of these receptors have been determined from cloned cDNA. Despite the fact that both receptors are G protein-coupled receptors and share approximately 50% homology, there are distinct differences between their physiological activity. The CCK A receptor is expressed in smooth muscle cells of the gall bladder, smooth muscle and neurons within the gastrointestinal tract, and has a much greater affinity (>10 2 times higher) for CCK than the related peptide hormone gastrin. The CCK B receptor, found in the stomach and throughout the CNS, has roughly equal ability to bind CCK and gastrin.

The varied activities of CCK can be partly attributed to the fact that CCK is synthesized as procholecystokinin, a protoprotein of 115 amino acids, and is then post-translationally cleaved into a number of active fragments all sharing the same C-terminus. The amino acid sequence of human procholecystokinin is shown below; amino acid residues not present in the biologically active cleavage products are in lower case. All amino acid sequences herein are shown from N-terminus to C-terminus, unless expressly indicated otherwise:

Human procholecystokinin, having the amino acid sequence SEQ ID NO:1:

mnsgvclcvlmavlaagaltqpvppadpagsglqraeeaprrqlr VSQRT DGESRAHLGA LLARYIQQAR KAPSGRMSIV KNLQNLDPSH RISDRDYMGW MDF grrsaeeyeyps

Biologically active cleavage products of the full length CCK chain include:

CCK-58, having the amino acid sequence SEQ ID NO:2:

VSQRT DGESRAHLGA LLARYIQQAR KAPSGRMSIV KNLQNLDPSH RISDRDYMGW MDF;

CCK-39, having the amino acid sequence SEQ ID NO: 3:

YIQQAR KAPSGRMSIV KNLQNLDPSH RISDRDYMGW MDF;

CCK-33, having the amino acid sequence SEQ ID NO: 4:

KAPSGRMSIV KNLQNLDPSH RISDRDYMGW MDF;

CCK-12, having the amino acid sequence SEQ ID NO: 5:

ISDRDYMGW MDF;

and CCK-8, having the amino acid sequence SEQ ID NO: 6:

RDYMGW MDF.

In each case, the biologically active polypeptides contain two additional post-translational modifications; amidation of the C-terminal phenylalanine, and sulfatation of the aspartic acid residue located seven residue from the C-terminus of the biologically active species. These modifications appear to be necessary for full biological activity, although both the C-terminal pentapeptide and tetrapeptide of CCK retains some biological activity. Kennedy et al., J. Biol. Chem. 272: 2920-2926 (1997), hereby incorporated by reference herein.

While it will be understood that the applicants do not wish to be bound by theory, the following findings may assist an understanding the nature of the interaction between CCK and the CCK receptors, and thus between the CCK receptor binding element of an embodiment of the present invention and its CCK receptor target.

In pancreatic acinar cells the CCK A receptor undergoes internalization to intracellular sites within minutes after agonist exposure. Pohl et al., J. Biol. Chem. 272: 18179-18184 (1997), hereby incorporated by reference herein. The CCK B receptor has also shown the same ligand-dependant internalization response in transfected NIH 3T3 cells. In the CCK B receptor, but not the CCK A receptor, the endocytotic feature of the receptor been shown to be profoundly decreased by the deletion of the C terminal 44 amino acids of the receptor chain, corresponding in both receptors to an cytoplasmic portion of the receptor chain.

Recent studies of the interaction between the CCK A receptor and CCK have shown that the primary receptor sequence region containing amino acid residues 38 through 42 is involved in the binding of CCK. Residues Trp 39 and Gln 40 appear to be essential for the binding of a synthetic CCK C-terminal nonapeptide (in which the methionine residues located at residue 3 and 6 from the C-terminus are substituted by norleucine and threonine respectively) to the receptor. Kennedy et al., supra. These residues do not appear to be essential for the binding of CCK analogs JMV 180 (corresponding the synthetic C-terminal heptapeptide of CCK in which the phenylalanylamide residue is substituted by a phenylethyl ester and the threonine is substituted with norleucine), and JMV 179 (in which the phenylalanylamide residue and the L-tryptophan residues of the synthetic CCK nonapeptide are substituted by a phenylethyl ester and D-tryptophan, respectively and the threonine is substituted with norleucine). Id.

These and similar studies have shed light on the structure of the CCK A receptor active site. Based on receptor binding experiments, a current structural model indicates that CCK residues Trp 30 and Met 31 (located at positions 4 and 3, respectively, from the C terminus of mature CCK-8) reside in a hydrophobic pocket formed by receptor residues Leu 348 , Pro 352 , Ile 353 and Ile 356 . CCK residue Asp 32 (located at amino acid position 2 measured from the C terminus of CCK-8) seems to be involved in an ionic interaction with receptor residue Lys 115 . CCK Tyr-sulfate 27 (the CCK-8 residue 7 amino acids from C terminus) appears involved in an ionic interaction with receptor residue Lys 105 and a stacking interaction with receptor residue Phe 198 . Ji, et al., 272 J. Biol. Chem. 24393-24401 (1997).

Such structural models provide detailed guidance to the person of ordinary skill in the art as to the construction of a variety of binding elements able to retain the binding characteristics of biologically active CCK peptides for the CCK-A receptor, for example, as, for example, by site directed mutagenesis of a clostridial neurotoxin heavy chain. Similarly, models deduced using similar methodologies have been proposed for the CCK B receptor, see e.g., Jagerschmidt, A. et al., Mol. Pharmacol. 48:783-789 (1995), and can be used as a basis for the construction of binding elements that retain binding characteristics similar to the CCK B receptor.

Additionally, the binding element may comprise a variable region of an antibody which will bind the CCK-A or CCK-B receptor.

Nucleic acids encoding polypeptides containing such a binding element may be constructed using molecular biology methods well known in the art; see e.g., Sambrook et al., Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Laboratory Press 2d ed. 1989), and expressed within a suitable host cell. The disclosure of this latter reference is incorporated by reference herein in its entirety.

The translocation element comprises a portion of a clostridial neurotoxin heavy chain having a translocation activity. By “translocation” is meant the ability to facilitate the transport of a polypeptide through a vesicular membrane, thereby exposing some or all of the polypeptide to the cytoplasm.

In the various botulinum neurotoxins translocation is thought to involve an allosteric conformational change of the heavy chain caused by a decrease in pH within the endosome.

This conformational change appears to involve and be mediated by the N terminal half of the heavy chain and to result in the formation of pores in the vesicular membrane; this change permits the movement of the proteolytic light chain from within the endosomal vesicle into the cytoplasm. See e.g., Lacy, et al., Nature Struct. Biol. 5:898-902 (October 1998).

The amino acid sequence of the translocation-mediating portion of the botulinum neurotoxin heavy chain is known to those of skill in the art; additionally, those amino acid residues within this portion that are known to be essential for conferring the translocation activity are also known.

It would therefore be well within the ability of one of ordinary skill in the art, for example, to employ the naturally occurring N-terminal peptide half of the heavy chain of any of the various Clostridium tetanus or Clostridium botulinum neurotoxin subtypes as a translocation element, or to design an analogous translocation element by aligning the primary sequences of the N-terminal halves of the various heavy chains and selecting a consensus primary translocation sequence based on conserved amino acid, polarity, steric and hydrophobicity characteristics between the sequences.

The therapeutic element of the present invention may comprise, without limitation: active or inactive (i.e., modified) hormone receptors (such as androgen, estrogen, retinoid, perioxysome proliferator and ecdysone receptors etc.), and hormone-agonists and antagonists, nucleic acids capable being of being used as replication, transcription, or translational templates (e.g., for expression of a protein drug having the desired biological activity or for synthesis of a nucleic acid drug as an antisense agent), enzymes, toxins (including apoptosis-inducing agents), and the like.

In a preferred embodiment, the therapeutic element is a polypeptide comprising a clostridial neurotoxin light chain or a portion thereof retaining the SNARE-protein sequence-specific endopeptidase activity of a clostridial neurotoxin light chain. The amino acid sequences of the light chain of botulinum neurotoxin (BoNT) subtypes A-G have been determined, as has the amino acid sequence of the light chain of the tetanus neurotoxin (TeNT). Each chain contains the Zn ++ -binding motif His-Glu-x-x-His (N terminal direction at the left) characteristic of Zn ++ -dependent endopeptidases (HELIH in TeNT, BoNT/A /B and /E; HELNH in BoNT/C; and HELTH in BoNT/D).

Recent studies of the BoNT/A light chain have revealed certain features important for the activity and specificity of the toxin towards its target substrate, SNAP-25. Thus, studies by Zhou et al. Biochemistry 34:15175-15181 (1995) have indicated that when the light chain amino acid residue His 227 is substituted with tyrosine, the resulting polypeptide is unable to cleave SNAP-25; Kurazono et al., J. Biol. Chem. 14721-14729 (1992) performed studies in the presynaptic cholinergic neurons of the buccal ganglia of Aplysia californica using recombinant BoNT/A light chain that indicated that the removal of 10 N-terminal or 32 C-terminal residues did not abolish toxicity, but that removal of 10 N-terminal or 57 C-terminal residues abolished toxicity in this system. Most recently, the crystal structure of the entire BoNT/A holotoxin has been solved; the active site is indicated as involving the participation of His 222 , Glu 223 , His 226 , Glu 261 and Tyr 365 . Lacy et al., supra. (These residues correspond to His 223 , Glu 224 , His 227 , Glu 262 and Tyr 366 of the BoNT/A L chain of Kurazono et al., supra.) Interestingly, an alignment of BoNT/A through E and TeNT light chains reveals that every such chain invariably has these residues in positions analogous to BoNT/A. Kurazono et al., supra.

The catalytic domain of BoNT/A is very specific for the C-terminus of SNAP-25 and appears to require a minimum of 16 SNAP-25 amino acids for cleavage to occur. The catalytic site resembles a pocket; when the light chained is linked to the heavy chain via the disulfide bond between Cys 429 and Cys 453 , the translocation domain of the heavy chain appears to block access to the catalytic pocket until the light chain gains entry to the cytosol. When the disulfide bond is reduced, the two polypeptide chains dissociate, and the catalytic pocket is then “opened” and the light chain is fully active.

As described above, VAMP and syntaxin are cleaved by BoNT/B, D, F, G and TeNT, and BoNT/C 1 , respectively, while SNAP-25 is cleaved by BoNT/A and E.

The substrate specificities of the various clostridial neurotoxin light chains other than BoNT/A are known. Therefore, the person of ordinary skill in the art could easily determine the toxin residues essential in these subtypes for cleavage and substrate recognition (for example, by site-directed mutagenesis or deletion of various regions of the toxin molecule followed by testing of proteolytic activity and substrate specificity), and could therefore easily design variants of the native neurotoxin light chain that retain the same or similar activity.

Additionally, construction of the therapeutic agents set forth in this specification would be easily constructed by the person of skill in the art. It is well known that the clostridial neurotoxins have three functional domains analogous to the three elements of the present invention. For example, the BoNT/A neurotoxin light chain is present in amino acid residues 1-448 of the BoNT/A prototoxin (i.e., before nicking of the prototoxin to form the disulfide-linked dichain holotoxin); this amino acid sequence is provided below as SEQ ID NO: 7. Active site residues are underlined:

BoNT/A Light Chain (SEQ ID NO:7)

RNTNLAANFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSKTKSLDKGYNK;

The heavy chain N-terminal (H N ) translocation domain is contained in amino acid residues 449-871 of the BoNT/A amino acid sequence, shown below as SEQ ID NO: 8; a gated ion channel-forming domain probably essential for the translocation activity of this peptide is underlined (see Oblatt-Montal et al., Protein Sci. 4:1490-1497(1995), hereby incorporated by reference herein.

VDNQRLLSTFTEYIK;

The heavy chain C-terminal neural cell binding domain is contained in amino acid residues 872-1296 (SEQ ID NO: 9) of the BoNT/A prototoxin.

The amino acid sequence of the BoNT/A prototoxin is encoded by nucleotides 358 to 4245 of the neurotoxin cDNA sequence, set forth herein below as SEQ ID NO: 10.

aagcttctaa atttaaatta ttaagtataa atccaaataa acaatatgtt caaaaacttg

atgaggtaat aatttctgta ttagataata tggaaaaata tatagatata tctgaagata

atagattgca actaatagat aacaaaaata acgcaaagaa gatgataatt agtaatgata

tatttatttc caattgttta accctatctt ataacggtaa atatatatgt ttatctatga

aagatgaaaa ccataattgg atgatatgta ataatgatat gtcaaagtat ttgtatttat

ggtcatttaa ataattaata atttaattaa ttttaaatat tataagaggt gttaaatatg

ccatttgtta ataaacaatt taattataaa gatcctgtaa atggtgttga tattgcttat

ataaaaattc caaatgcagg acaaatgcaa ccagtaaaag cttttaaaat tcataataaa

atatgggtta ttccagaaag agatacattt acaaatcctg aagaaggaga tttaaatcca

ccaccagaag caaaacaagt tccagtttca tattatgatt caacatattt aagtacagat

aatgaaaaag ataattattt aaagggagtt acaaaattat ttgagagaat ttattcaact

gatcttggaa gaatgttgtt aacatcaata gtaaggggaa taccattttg gggtggaagt

acaatagata cagaattaaa agttattgat actaattgta ttaatgtgat acaaccagat

ggtagttata gatcagaaga acttaatcta gtaataatag gaccctcagc tgatattata

cagtttgaat gtaaaagctt tggacatgaa gttttgaatc ttacgcgaaa tggttatggc

tctactcaat acattagatt tagcccagat tttacatttg gttttgagga gtcacttgaa

gttgatacaa atcctctttt aggtgcaggc aaatttgcta cagatccagc agtaacatta

gcacatgaac ttatacatgc tggacataga ttatatggaa tagcaattaa tccaaatagg

gtttttaaag taaatactaa tgcctattat gaaatgagtg ggttagaagt aagctttgag

gaacttagaa catttggggg acatgatgca aagtttatag atagtttaca ggaaaacgaa

tttcgtctat attattataa taagtttaaa gatatagcaa gtacacttaa taaagctaaa

tcaatagtag gtactactgc ttcattacag tatatgaaaa atgtttttaa agagaaatat

ctcctatctg aagatacatc tggaaaattt tcggtagata aattaaaatt tgataagtta

tacaaaatgt taacagagat ttacacagag gataattttg ttaagttttt taaagtactt

aacagaaaaa catatttgaa ttttgataaa gccgtattta agataaatat agtacctaag

gtaaattaca caatatatga tggatttaat ttaagaaata caaatttagc agcaaacttt

aatggtcaaa atacagaaat taataatatg aattttacta aactaaaaaa ttttactgga

ttgtttgaat tttataagtt gctatgtgta agagggataa taacttctaa aactaaatca

ttagataaag gatacaataa ggcattaaat gatttatgta tcaaagttaa taattgggac

ttgtttttta gtccttcaga agataatttt actaatgatc taaataaagg agaagaaatt

acatctgata ctaatataga agcagcagaa gaaaatatta gtttagattt aatacaacaa

tattatttaa cctttaattt tgataatgaa cctgaaaata tttcaataga aaatctttca

agtgacatta taggccaatt agaacttatg cctaatatag aaagatttcc taatggaaaa

aagtatgagt tagataaata tactatgttc cattatcttc gtgctcaaga atttgaacat

ggtaaatcta ggattgcttt aacaaattct gttaacgaag cattattaaa tcctagtcgt

gtttatacat ttttttcttc agactatgta aagaaagtta ataaagctac ggaggcagct

atgtttttag gctgggtaga acaattagta tatgatttta ccgatgaaac tagcgaagta

agtactacgg ataaaattgc ggatataact ataattattc catatatagg acctgcttta

aatataggta atatgttata taaagatgat tttgtaggtg ctttaatatt ttcaggagct

gttattctgt tagaatttat accagagatt gcaatacctg tattaggtac ttttgcactt

gtatcatata ttgcgaataa ggttctaacc gttcaaacaa tagataatgc tttaagtaaa

agaaatgaaa aatgggatga ggtctataaa tatatagtaa caaattggtt agcaaaggtt

aatacacaga ttgatctaat aagaaaaaaa atgaaagaag ctttagaaaa tcaagcagaa

gcaacaaagg ctataataaa ctatcagtat aatcaatata ctgaggaaga gaaaaataat

attaatttta atattgatga tttaagttcg aaacttaatg agtctataaa taaagctatg

attaatataa ataaattttt gaatcaatgc tctgtttcat atttaatgaa ttctatgatc

ccttatggtg ttaaacggtt agaagatttt gatgctagtc ttaaagatgc attattaaag

tatatatatg ataatagagg aactttaatt ggtcaagtag atagattaaa agataaagtt

aataatacac ttagtacaga tatacctttt cagctttcca aatacgtaga taatcaaaga

ttattatcta catttactga atatattaag aatattatta atacttctat attgaattta

agatatgaaa gtaatcattt aatagactta tctaggtatg catcaaaaat aaatattggt

agtaaagtaa attttgatcc aatagataaa aatcaaattc aattatttaa tttagaaagt

agtaaaattg aggtaatttt aaaaaatgct attgtatata atagtatgta tgaaaatttt

agtactagct tttggataag aattcctaag tattttaaca gtataagtct aaataatgaa

tatacaataa taaattgtat ggaaaataat tcaggatgga aagtatcact taattatggt

gaaataatct ggactttaca ggatactcag gaaataaaac aaagagtagt ttttaaatac

agtcaaatga ttaatatatc agattatata aacagatgga tttttgtaac tatcactaat

aatagattaa ataactctaa aatttatata aatggaagat taatagatca aaaaccaatt

tcaaatttag gtaatattca tgctagtaat aatataatgt ttaaattaga tggttgtaga

gatacacata gatatatttg gataaaatat tttaatcttt ttgataagga attaaatgaa

aaagaaatca aagatttata tgataatcaa tcaaattcag gtattttaaa agacttttgg

ggtgattatt tacaatatga taaaccatac tatatgttaa atttatatga tccaaataaa

tatgtcgatg taaataatgt aggtattaga ggttatatgt atcttaaagg gcctagaggt

agcgtaatga ctacaaacat ttatttaaat tcaagtttgt atagggggac aaaatttatt

ataaaaaaat atgcttctgg aaataaagat aatattgtta gaaataatga tcgtgtatat

gtagaaaaaa tactaagtgc attagaaata cctgatgtag gaaatctaag tcaagtagta

gtaatgaagt caaaaaatga tcaaggaata acaaataaat gcaaaatgaa tttacaagat

aataatggga atgatatagg ctttatagga tttcatcagt ttaataatat agctaaacta

gtagcaagta attggtataa tagacaaata gaaagatcta gtaggacttt gggttgctca

tgggaattta ttcctgtaga tgatggatgg ggagaaaggc cactgtaatt aatctcaaac

tacatgagtc tgtcaagaat tttctgtaaa catccataaa aattttaaaa ttaatatgtt

taagaataac tagatatgag tattgtttga actgcccctg tcaagtagac aggtaaaaaa

ataaaaatta agatactatg gtctgatttc gatattctat cggagtcaga ccttttaact

tttcttgtat cctttttgta ttgtaaaact ctatgtattc atcaattgca agttccaatt

agtcaaaatt atgaaacttt ctaagataat acatttctga ttttataatt tcccaaaatc

cttccatagg accattatca atacatctac caactcgaga catactttga gttgcgccta

tctcattaag tttattcttg aaagatttac ttgtatattg aaaaccgcta tcactgtgaa

aaagtggact agcatcagga ttggaggtaa ctgctttatc aaaggtttca aagacaagga

cgttgttatt tgattttcca agtacatagg aaataatgct attatcatgc aaatcaagta

tttcactcaa gtacgccttt gtttcgtctg ttaac

Of course, three distinct domains analogous to those described above for BoNT/A exist for all the BoNT subtypes as well as for TeNT neurotoxin; an alignment of the amino acid sequences of these holotoxins will reveal the sequence coordinates for these other neurotoxin species.

Preferably, the translocation element and the binding element of the compositions of the present invention are separated by a spacer moiety that facilitates the binding element's binding to the desired cell surface receptor. Such a spacer may comprise, for example, a portion of the BoNT Hc sequence (so long as the portion does not retain the ability to bind to motor neurons or sensory afferent neurons), another sequence of amino acids, or a hydrocarbon moiety. The spacer moiety may also comprise a proline, serine, threonine and/or cysteine-rich amino acid sequence similar or identical to a human immunoglobulin hinge region. In a preferred embodiment, the spacer region comprises the amino acid sequence of an immunoglobulin γ1 hinge region; such a sequence has the sequence (from N terminus to C terminus):

EPKSCDKTHTCPPCP (SEQ ID NO:11)

It will be understood that none of the examples or embodiments described herein are to be construed as limiting the scope of the invention, which is defined solely by the claims that conclude this specification.

Homo Sapiens

1

Ser Glu Gln Glu Asn Cys Glu Leu Ile Ser Thr Ile Asn Gly Met Asn

1 5 10 15

Ser Gly Val Cys Leu Cys Val Leu Met Ala Val Leu Ala Ala Gly Ala

20 25 30

Leu Thr Gln Pro Val Pro Pro Ala Asp Pro Ala Gly Ser Gly Leu Gln

35 40 45

Arg Ala Glu Glu Ala Pro Arg Arg Gln Leu Arg Val Ser Gln Arg Thr

50 55 60

Asp Gly Glu Ser Arg Ala His Leu Gly Ala Leu Leu Ala Arg Tyr Ile

65 70 75 80

Gln Gln Ala Arg Lys Ala Pro Ser Gly Arg Met Ser Ile Val Lys Asn

85 90 95

Leu Gln Asn Leu Asp Pro Ser His Arg Ile Ser Asp Arg Asp Tyr Met

100 105 110

Gly Trp Met Asp Phe Gly Arg Arg Ser Ala Glu Glu Tyr Glu Tyr Pro

115 120 125

Ser

2

58

Homo Sapiens

2

Val Ser Gln Arg Thr Asp Gly Glu Ser Arg Ala His Leu Gly Ala Leu

1 5 10 15

Leu Ala Arg Tyr Ile Gln Gln Ala Arg Lys Ala Pro Ser Gly Arg Met

20 25 30

Ser Ile Val Lys Asn Leu Gln Asn Leu Asp Pro Ser His Arg Ile Ser

35 40 45

Asp Arg Asp Tyr Met Gly Trp Met Asp Phe

50 55

3

39

Homo Sapiens

3

Tyr Ile Gln Gln Ala Arg Lys Ala Pro Ser Gly Arg Met Ser Ile Val

1 5 10 15

Lys Asn Leu Gln Asn Leu Asp Pro Ser His Arg Ile Ser Asp Arg Asp

20 25 30

Tyr Met Gly Trp Met Asp Phe

35

4

33

Homo Sapiens

4

Lys Ala Pro Ser Gly Arg Met Ser Ile Val Lys Asn Leu Gln Asn Leu

1 5 10 15

Asp Pro Ser His Arg Ile Ser Asp Arg Asp Tyr Met Gly Trp Met Asp

20 25 30

Phe

5

12

Homo Sapiens

5

Ile Ser Asp Arg Asp Tyr Met Gly Trp Met Asp Phe

1 5 10

6

9

Homo Sapiens

6

Arg Asp Tyr Met Gly Trp Met Asp Phe

1 5

7

448

Clostridium botulinum

7

Met Pro Phe Val Asn Lys Gln Phe Asn Tyr Lys Asp Pro Val Asn Gly

1 5 10 15

Val Asp Ile Ala Tyr Ile Lys Ile Pro Asn Ala Gly Gln Met Gln Pro

20 25 30

Val Lys Ala Phe Lys Ile His Asn Lys Ile Trp Val Ile Pro Glu Arg

35 40 45

Asp Thr Phe Thr Asn Pro Glu Glu Gly Asp Leu Asn Pro Pro Pro Glu

50 55 60

Ala Lys Gln Val Pro Val Ser Tyr Tyr Asp Ser Thr Tyr Leu Ser Thr

65 70 75 80

Asp Asn Glu Lys Asp Asn Tyr Leu Lys Gly Val Thr Lys Leu Phe Glu

85 90 95

Arg Ile Tyr Ser Thr Asp Leu Gly Arg Met Leu Leu Thr Ser Ile Val

100 105 110

Arg Gly Ile Pro Phe Trp Gly Gly Ser Thr Ile Asp Thr Glu Leu Lys

115 120 125

Val Ile Asp Thr Asn Cys Ile Asn Val Ile Gln Pro Asp Gly Ser Tyr

130 135 140

Arg Ser Glu Glu Leu Asn Leu Val Ile Ile Gly Pro Ser Ala Asp Ile

145 150 155 160

Ile Gln Phe Glu Cys Lys Ser Phe Gly His Glu Val Leu Asn Leu Thr

165 170 175

Arg Asn Gly Tyr Gly Ser Thr Gln Tyr Ile Arg Phe Ser Pro Asp Phe

180 185 190

Thr Phe Gly Phe Glu Glu Ser Leu Glu Val Asp Thr Asn Pro Leu Leu

195 200 205

Gly Ala Gly Lys Phe Ala Thr Asp Pro Ala Val Thr Leu Ala His Glu

210 215 220

Leu Ile His Ala Gly His Arg Leu Tyr Gly Ile Ala Ile Asn Pro Asn

225 230 235 240

Arg Val Phe Lys Val Asn Thr Asn Ala Tyr Tyr Glu Met Ser Gly Leu

245 250 255

Glu Val Ser Phe Glu Glu Leu Arg Thr Phe Gly Gly His Asp Ala Lys

260 265 270

Phe Ile Asp Ser Leu Gln Glu Asn Glu Phe Arg Leu Tyr Tyr Tyr Asn

275 280 285

Lys Phe Lys Asp Ile Ala Ser Thr Leu Asn Lys Ala Lys Ser Ile Val

290 295 300

Gly Thr Thr Ala Ser Leu Gln Tyr Met Lys Asn Val Phe Lys Glu Lys

305 310 315 320

Tyr Leu Leu Ser Glu Asp Thr Ser Gly Lys Phe Ser Val Asp Lys Leu

325 330 335

Lys Phe Asp Lys Leu Tyr Lys Met Leu Thr Glu Ile Tyr Thr Glu Asp

340 345 350

Asn Phe Val Lys Phe Phe Lys Val Leu Asn Arg Lys Thr Tyr Leu Asn

355 360 365

Phe Asp Lys Ala Val Phe Lys Ile Asn Ile Val Pro Lys Val Asn Tyr

370 375 380

Thr Ile Tyr Asp Gly Phe Asn Leu Arg Asn Thr Asn Leu Ala Ala Asn

385 390 395 400

Phe Asn Gly Gln Asn Thr Glu Ile Asn Asn Met Asn Phe Thr Lys Leu

405 410 415

Lys Asn Phe Thr Gly Leu Phe Glu Phe Tyr Lys Leu Leu Cys Val Arg

420 425 430

Gly Ile Ile Thr Ser Lys Thr Lys Ser Leu Asp Lys Gly Tyr Asn Lys

435 440 445

8

423

Clostridium botulinum

8

Ala Leu Asn Asp Leu Cys Ile Lys Val Asn Asn Trp Asp Leu Phe Phe

1 5 10 15

Ser Pro Ser Glu Asp Asn Phe Thr Asn Asp Leu Asn Lys Gly Glu Glu

20 25 30

Ile Thr Ser Asp Thr Asn Ile Glu Ala Ala Glu Glu Asn Ile Ser Leu

35 40 45

Asp Leu Ile Gln Gln Tyr Tyr Leu Thr Phe Asn Phe Asp Asn Glu Pro

50 55 60

Glu Asn Ile Ser Ile Glu Asn Leu Ser Ser Asp Ile Ile Gly Gln Leu

65 70 75 80

Glu Leu Met Pro Asn Ile Glu Arg Phe Pro Asn Gly Lys Lys Tyr Glu

85 90 95

Leu Asp Lys Tyr Thr Met Phe His Tyr Leu Arg Ala Gln Glu Phe Glu

100 105 110

His Gly Lys Ser Arg Ile Ala Leu Thr Asn Ser Val Asn Glu Ala Leu

115 120 125

Leu Asn Pro Ser Arg Val Tyr Thr Phe Phe Ser Ser Asp Tyr Val Lys

130 135 140

Lys Val Asn Lys Ala Thr Glu Ala Ala Met Phe Leu Gly Trp Val Glu

145 150 155 160

Gln Leu Val Tyr Asp Phe Thr Asp Glu Thr Ser Glu Val Ser Thr Thr

165 170 175

Asp Lys Ile Ala Asp Ile Thr Ile Ile Ile Pro Tyr Ile Gly Pro Ala

180 185 190

Leu Asn Ile Gly Asn Met Leu Tyr Lys Asp Asp Phe Val Gly Ala Leu

195 200 205

Ile Phe Ser Gly Ala Val Ile Leu Leu Glu Phe Ile Pro Glu Ile Ala

210 215 220

Ile Pro Val Leu Gly Thr Phe Ala Leu Val Ser Tyr Ile Ala Asn Lys

225 230 235 240

Val Leu Thr Val Gln Thr Ile Asp Asn Ala Leu Ser Lys Arg Asn Glu

245 250 255

Lys Trp Asp Glu Val Tyr Lys Tyr Ile Val Thr Asn Trp Leu Ala Lys

260 265 270

Val Asn Thr Gln Ile Asp Leu Ile Arg Lys Lys Met Lys Glu Ala Leu

275 280 285

Glu Asn Gln Ala Glu Ala Thr Lys Ala Ile Ile Asn Tyr Gln Tyr Asn

290 295 300

Gln Tyr Thr Glu Glu Glu Lys Asn Asn Ile Asn Phe Asn Ile Asp Asp

305 310 315 320

Leu Ser Ser Lys Leu Asn Glu Ser Ile Asn Lys Ala Met Ile Asn Ile

325 330 335

Asn Lys Phe Leu Asn Gln Cys Ser Val Ser Tyr Leu Met Asn Ser Met

340 345 350

Ile Pro Tyr Gly Val Lys Arg Leu Glu Asp Phe Asp Ala Ser Leu Lys

355 360 365

Asp Ala Leu Leu Lys Tyr Ile Tyr Asp Asn Arg Gly Thr Leu Ile Gly

370 375 380

Gln Val Asp Arg Leu Lys Asp Lys Val Asn Asn Thr Leu Ser Thr Asp

385 390 395 400

Ile Pro Phe Gln Leu Ser Lys Tyr Val Asp Asn Gln Arg Leu Leu Ser

405 410 415

Thr Phe Thr Glu Tyr Ile Lys

420

9

382

Clostridium Botilinum

9

Gln Leu Phe Asn Leu Glu Ser Ser Lys Ile Glu Val Ile Leu Lys Asn

1 5 10 15

Ala Ile Val Tyr Asn Ser Met Tyr Glu Asn Phe Ser Thr Ser Phe Trp

20 25 30

Ile Arg Ile Pro Lys Tyr Phe Asn Ser Ile Ser Leu Asn Asn Glu Tyr

35 40 45

Thr Ile Ile Asn Cys Met Glu Asn Asn Ser Gly Trp Lys Val Ser Leu

50 55 60

Asn Tyr Gly Glu Ile Ile Trp Thr Leu Gln Asp Thr Gln Glu Ile Lys

65 70 75 80

Gln Arg Val Val Phe Lys Tyr Ser Gln Met Ile Asn Ile Ser Asp Tyr

85 90 95

Ile Asn Arg Trp Ile Phe Val Thr Ile Thr Asn Asn Arg Leu Asn Asn

100 105 110

Ser Lys Ile Tyr Ile Asn Gly Arg Leu Ile Asp Gln Lys Pro Ile Ser

115 120 125

Asn Leu Gly Asn Ile His Ala Ser Asn Asn Ile Met Phe Lys Leu Asp

130 135 140

Gly Cys Arg Asp Thr His Arg Tyr Ile Trp Ile Lys Tyr Phe Asn Leu

145 150 155 160

Phe Asp Lys Glu Leu Asn Glu Lys Glu Ile Lys Asp Leu Tyr Asp Asn

165 170 175

Gln Ser Asn Ser Gly Ile Leu Lys Asp Phe Trp Gly Asp Tyr Leu Gln

180 185 190

Tyr Asp Lys Pro Tyr Tyr Met Leu Asn Leu Tyr Asp Pro Asn Lys Tyr

195 200 205

Val Asp Val Asn Asn Val Gly Ile Arg Gly Tyr Met Tyr Leu Lys Gly

210 215 220

Pro Arg Gly Ser Val Met Thr Thr Asn Ile Tyr Leu Asn Ser Ser Leu

225 230 235 240

Tyr Arg Gly Thr Lys Phe Ile Ile Lys Lys Tyr Ala Ser Gly Asn Lys

245 250 255

Asp Asn Ile Val Arg Asn Asn Asp Arg Val Tyr Ile Asn Val Val Val

260 265 270

Lys Asn Lys Glu Tyr Arg Leu Ala Thr Asn Ala Ser Gln Ala Gly Val

275 280 285

Glu Lys Ile Leu Ser Ala Leu Glu Ile Pro Asp Val Gly Asn Leu Ser

290 295 300

Gln Val Val Val Met Lys Ser Lys Asn Asp Gln Gly Ile Thr Asn Lys

305 310 315 320

Cys Lys Met Asn Leu Gln Asp Asn Asn Gly Asn Asp Ile Gly Phe Ile

325 330 335

Gly Phe His Gln Phe Asn Asn Ile Ala Lys Leu Val Ala Ser Asn Trp

340 345 350

Tyr Asn Arg Gln Ile Glu Arg Ser Ser Arg Thr Leu Gly Cys Ser Trp

355 360 365

Glu Phe Ile Pro Val Asp Asp Gly Trp Gly Glu Arg Pro Leu

370 375 380

10

4835

Clostridium botulinum

10

aagcttctaa atttaaatta ttaagtataa atccaaataa acaatatgtt caaaaacttg 60

atgaggtaat aatttctgta ttagataata tggaaaaata tatagatata tctgaagata 120

atagattgca actaatagat aacaaaaata acgcaaagaa gatgataatt agtaatgata 180

tatttatttc caattgttta accctatctt ataacggtaa atatatatgt ttatctatga 240

aagatgaaaa ccataattgg atgatatgta ataatgatat gtcaaagtat ttgtatttat 300

ggtcatttaa ataattaata atttaattaa ttttaaatat tataagaggt gttaaatatg 360

ccatttgtta ataaacaatt taattataaa gatcctgtaa atggtgttga tattgcttat 420

ataaaaattc caaatgcagg acaaatgcaa ccagtaaaag cttttaaaat tcataataaa 480

atatgggtta ttccagaaag agatacattt acaaatcctg aagaaggaga tttaaatcca 540

ccaccagaag caaaacaagt tccagtttca tattatgatt caacatattt aagtacagat 600

aatgaaaaag ataattattt aaagggagtt acaaaattat ttgagagaat ttattcaact 660

gatcttggaa gaatgttgtt aacatcaata gtaaggggaa taccattttg gggtggaagt 720

acaatagata cagaattaaa agttattgat actaattgta ttaatgtgat acaaccagat 780

ggtagttata gatcagaaga acttaatcta gtaataatag gaccctcagc tgatattata 840

cagtttgaat gtaaaagctt tggacatgaa gttttgaatc ttacgcgaaa tggttatggc 900

tctactcaat acattagatt tagcccagat tttacatttg gttttgagga gtcacttgaa 960

gttgatacaa atcctctttt aggtgcaggc aaatttgcta cagatccagc agtaacatta 1020

gcacatgaac ttatacatgc tggacataga ttatatggaa tagcaattaa tccaaatagg 1080

gtttttaaag taaatactaa tgcctattat gaaatgagtg ggttagaagt aagctttgag 1140

gaacttagaa catttggggg acatgatgca aagtttatag atagtttaca ggaaaacgaa 1200

tttcgtctat attattataa taagtttaaa gatatagcaa gtacacttaa taaagctaaa 1260

tcaatagtag gtactactgc ttcattacag tatatgaaaa atgtttttaa agagaaatat 1320

ctcctatctg aagatacatc tggaaaattt tcggtagata aattaaaatt tgataagtta 1380

tacaaaatgt taacagagat ttacacagag gataattttg ttaagttttt taaagtactt 1440

aacagaaaaa catatttgaa ttttgataaa gccgtattta agataaatat agtacctaag 1500

gtaaattaca caatatatga tggatttaat ttaagaaata caaatttagc agcaaacttt 1560

aatggtcaaa atacagaaat taataatatg aattttacta aactaaaaaa ttttactgga 1620

ttgtttgaat tttataagtt gctatgtgta agagggataa taacttctaa aactaaatca 1680

ttagataaag gatacaataa ggcattaaat gatttatgta tcaaagttaa taattgggac 1740

ttgtttttta gtccttcaga agataatttt actaatgatc taaataaagg agaagaaatt 1800

acatctgata ctaatataga agcagcagaa gaaaatatta gtttagattt aatacaacaa 1860

tattatttaa cctttaattt tgataatgaa cctgaaaata tttcaataga aaatctttca 1920

agtgacatta taggccaatt agaacttatg cctaatatag aaagatttcc taatggaaaa 1980

aagtatgagt tagataaata tactatgttc cattatcttc gtgctcaaga atttgaacat 2040

ggtaaatcta ggattgcttt aacaaattct gttaacgaag cattattaaa tcctagtcgt 2100

gtttatacat ttttttcttc agactatgta aagaaagtta ataaagctac ggaggcagct 2160

atgtttttag gctgggtaga acaattagta tatgatttta ccgatgaaac tagcgaagta 2220

agtactacgg ataaaattgc ggatataact ataattattc catatatagg acctgcttta 2280

aatataggta atatgttata taaagatgat tttgtaggtg ctttaatatt ttcaggagct 2340

gttattctgt tagaatttat accagagatt gcaatacctg tattaggtac ttttgcactt 2400

gtatcatata ttgcgaataa ggttctaacc gttcaaacaa tagataatgc tttaagtaaa 2460

agaaatgaaa aatgggatga ggtctataaa tatatagtaa caaattggtt agcaaaggtt 2520

aatacacaga ttgatctaat aagaaaaaaa atgaaagaag ctttagaaaa tcaagcagaa 2580

gcaacaaagg ctataataaa ctatcagtat aatcaatata ctgaggaaga gaaaaataat 2640

attaatttta atattgatga tttaagttcg aaacttaatg agtctataaa taaagctatg 2700

attaatataa ataaattttt gaatcaatgc tctgtttcat atttaatgaa ttctatgatc 2760

ccttatggtg ttaaacggtt agaagatttt gatgctagtc ttaaagatgc attattaaag 2820

tatatatatg ataatagagg aactttaatt ggtcaagtag atagattaaa agataaagtt 2880

aataatacac ttagtacaga tatacctttt cagctttcca aatacgtaga taatcaaaga 2940

ttattatcta catttactga atatattaag aatattatta atacttctat attgaattta 3000

agatatgaaa gtaatcattt aatagactta tctaggtatg catcaaaaat aaatattggt 3060

agtaaagtaa attttgatcc aatagataaa aatcaaattc aattatttaa tttagaaagt 3120

agtaaaattg aggtaatttt aaaaaatgct attgtatata atagtatgta tgaaaatttt 3180

agtactagct tttggataag aattcctaag tattttaaca gtataagtct aaataatgaa 3240

tatacaataa taaattgtat ggaaaataat tcaggatgga aagtatcact taattatggt 3300

gaaataatct ggactttaca ggatactcag gaaataaaac aaagagtagt ttttaaatac 3360

agtcaaatga ttaatatatc agattatata aacagatgga tttttgtaac tatcactaat 3420

aatagattaa ataactctaa aatttatata aatggaagat taatagatca aaaaccaatt 3480

tcaaatttag gtaatattca tgctagtaat aatataatgt ttaaattaga tggttgtaga 3540

gatacacata gatatatttg gataaaatat tttaatcttt ttgataagga attaaatgaa 3600

aaagaaatca aagatttata tgataatcaa tcaaattcag gtattttaaa agacttttgg 3660

ggtgattatt tacaatatga taaaccatac tatatgttaa atttatatga tccaaataaa 3720

tatgtcgatg taaataatgt aggtattaga ggttatatgt atcttaaagg gcctagaggt 3780

agcgtaatga ctacaaacat ttatttaaat tcaagtttgt atagggggac aaaatttatt 3840

ataaaaaaat atgcttctgg aaataaagat aatattgtta gaaataatga tcgtgtatat 3900

attaatgtag tagttaaaaa taaagaatat aggttagcta ctaatgcatc acaggcaggc 3960

gtagaaaaaa tactaagtgc attagaaata cctgatgtag gaaatctaag tcaagtagta 4020

gtaatgaagt caaaaaatga tcaaggaata acaaataaat gcaaaatgaa tttacaagat 4080

aataatggga atgatatagg ctttatagga tttcatcagt ttaataatat agctaaacta 4140

gtagcaagta attggtataa tagacaaata gaaagatcta gtaggacttt gggttgctca 4200

tgggaattta ttcctgtaga tgatggatgg ggagaaaggc cactgtaatt aatctcaaac 4260

tacatgagtc tgtcaagaat tttctgtaaa catccataaa aattttaaaa ttaatatgtt 4320

taagaataac tagatatgag tattgtttga actgcccctg tcaagtagac aggtaaaaaa 4380

ataaaaatta agatactatg gtctgatttc gatattctat cggagtcaga ccttttaact 4440

tttcttgtat cctttttgta ttgtaaaact ctatgtattc atcaattgca agttccaatt 4500

agtcaaaatt atgaaacttt ctaagataat acatttctga ttttataatt tcccaaaatc 4560

cttccatagg accattatca atacatctac caactcgaga catactttga gttgcgccta 4620

tctcattaag tttattcttg aaagatttac ttgtatattg aaaaccgcta tcactgtgaa 4680

aaagtggact agcatcagga ttggaggtaa ctgctttatc aaaggtttca aagacaagga 4740

cgttgttatt tgattttcca agtacatagg aaataatgct attatcatgc aaatcaagta 4800

tttcactcaa gtacgccttt gtttcgtctg ttaac 4835

11

15

Homo sapiens

11

Glu Pro Lys Ser Cys Asp Lys Thr His Thr Cys Pro Pro Cys Pro

1 5 10 15

Met,Asn, Pro, Gln,Arg,Ser,Thr,Val,Trp orTyr

12

His Glu Xaa Xaa His

1 5

13

5

Clostridium species

13

His Glu Leu Ile His

1 5

14

5

Clostridium species

14

His Glu Leu Asn His

1 5

15

5

Clostridium species

15

His Glu Leu Thr His

1 5