USPatent applicationPatented

Methods of classifying periorbital dyschromia and systems therefor

Granted 10 Sep 2019 · 5 office actions

Application· this page
14/215,785
filed 17 Mar 2014
Publication
Not published
not published
Patent
US 10,405,795
granted 10 Sep 2019

Life of the application

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Abstract

A method and system for classifying different types of periorbital dyschromia is disclosed. The method includes providing at least one of a predetermined imaging characteristic and a biological characteristic for each of three different types of periorbital dyschromia, and then measuring the appropriate characteristic on a person exhibiting periorbital dyschromia. The type of periorbital dyschromia exhibited by a person can then be determined by comparing the measured value to the predetermined value and selecting the corresponding type of periorbital dyschromia.

Description

23 parts
›FIELD OF THE INVENTION

The present application is directed, generally, to methods and systems for classifying periorbital dyschromia on a person. More specifically, the present application discloses methods and systems for classifying different types of periorbital dyschromia based on visual characteristics, histology, the presence, absence and/or abundance of biomarkers and genetic indicators.

›BACKGROUND OF THE INVENTION · 1 of 2

A person's eyes are a prominent and noticeable facial feature. Thus, any desirable or undesirable aesthetic features associated with the eyes may influence an individual's perception of herself or himself or the impression that the individual makes on others. Undesirable aesthetic features may include lines, wrinkles and discoloration of the skin. For example, some people may find periorbital dyschromia, sometimes referred to as dark circles or under-eye dark circles, to be aesthetically undesirable and/or they may associate the appearance of periorbital dyschromia with fatigue and/or age. It should come as no surprise then that throughout history a variety of ways to accentuate and/or beautify the eyes have been devised. A common approach to improve the appearance of periorbital dyschromia is to use a cosmetic composition such as a concealer or the like to hide the discoloration. Using make up to hide a perceived flaw may provide a temporary cosmetic benefit, but most conventional make up products require daily application and, in some instances, may even require reapplication throughout the day. Thus, a more permanent solution is desired to reduce and/or eliminate some of the undesirable aesthetic features commonly found around the eye.

As mentioned above, a particularly undesirable aesthetic eye feature is periorbital dyschromia. In an effort to find a solution to the problem of periorbital dyschromia, researchers have previously tried to identify its underlying causes. One theory suggests that periorbital dyschromia occurrence is based on the difference between the thickness of the skin in the periorbital region (i.e., the skin around the eye) and the thickness of the skin in other areas of the face such as the cheeks. It is known that the skin surrounding the eyes is typically thinner than other facial skin (e.g., on the order of 0.33 to 0.36 ram or 3 to 5 times thinner than the rest of the skin of the face). As a result, some conventional theories posit that the skin around the eyes may be easily dehydrated and particularly vulnerable to adverse impact of external factors such as heat, stress, tobacco, UV rays, and excessive facial expressions. According to these theories, the skin tissues around the eye area may undergo multiple variations throughout the day, such as vascularization, hydration and turgescence, which contributes to swelling/puffiness and/or the appearance of dark circles under the eyes. While the thinness of the skin in the periorbital region may play a role in the occurrence of periorbital dyschromia, it is not a suitable characteristic for distinguishing different types of periorbital dyschromia. This is because most people generally have thinner skin in the periorbital region compared to other areas of the face, yet not all people have the same type of periorbital dyschromia or, in sonic instances, any periorbital dyschromia at all. Thus, there remains a need to find suitable characteristics for distinguishing different types of dark circles.

Another theory attributes the occurrence of periorbital dyschromia to hyperpigmentation, or the overproduction of melanin in the skin under the eye. But recent studies have revealed that the cause of under-eye dark circles is more often the result of a combination of factors such as deep vascular congestion/superficial vascularity, hyperpigmentation, skin translucency, and structural shadowing, alone or in combination. The belief that a variety of factors are responsible for causing periorbital dyschromia has led to attempts to classify periorbital dyschromia into discrete types according to the different underlying factor(s) believed to be responsible for the discoloration. But these attempts have failed to provide a commercially viable method of classifying periorbital dyschromia or a system that is suitable for developing and marketing cosmetic products that target periorbital dyschromia. In some instances, there were too many classes of periorbital dyschromia, which requires a manufacturer to develop more cosmetic products or line ups and/or market a more complex treatment method. In some instances, the system used to classify the types of periorbital dyschromia may be too complex to allow consumer to self-diagnose, for example, at home or in a commercial environment such as a retail store.

Another theory suggests that chromophores such as melanin and hemoglobin present in the undereye region contribute to the occurrence of periorbital dyschromia. Melanin is a naturally produced pigment in the skin, and hemoglobin is the iron-containing oxygen-transport metalloprotein in the red blood cells of all humans. It is commonly believed that melanin and hemoglobin are primarily responsible for the skin tone of a person. Thus, some recent attempts to classify dark circles have included analyzing relatively small areas of skin on the lower eyelid with a device that correlates certain wavelengths of reflected light into measurements of melanin and/or hemoglobin present in the skin. While this approach may be suitable for providing an indication of the melanin and/or hemoglobin content of the particular area of skin analyzed, it has several drawbacks. For example, the amount of melanin and/or hemoglobin present in the skin or in the blood vessels in under-eye skin can vary based on a wide variety of environment and/or biological influences, which current analytical approaches do not consider. Additionally, current approaches to classifying dark circles based on melanin and hemoglobin levels may not take into account one or more of a variety of other factors believed to contribute to periorbital dyschromia, which are important to include in a robust classification method and/or system suitable for use in commerce. Previous attempts to analyze periorbital dyschromia based on melanin and hemoglobin measurements also focused on the skin of the lower eyelid. Since it is not uncommon for periorbital dyschromia to occur in the periorbital region above the eye and in portions of the undereye region, but not the entire undereye region, it is important to holistically analyze periorbital dyschromia in the periorbital region.

›BACKGROUND OF THE INVENTION · 2 of 2

It is currently recognized that periorbital dyschromia is a multifactorial pathogenesis that is not well elucidated. Past attempts to classify periorbital dyschromia may have shown that there are different types of periorbital dyschronia, but they still have failed to provide a suitable method or system of classifying the different types. Further, there is a need for products, product line ups and/or treatment regimens that are particularly suited for treating different types of periorbital dyschromia. For example, some researchers may have recognized that there are different types of periorbital dyschromia, but they still propose treating different types of periorbital dyschromia with the same composition or material. Other researchers have suggested that a “one size fits all” approach to treating periorbital dyschromia may not be suitable, due to the numerous and not well understood differences in the underlying causes of periorbital dyschromia, but they do not proffer a suitable alternative. Thus, there remains a need for a suitable method and system of classifying periorbital dyschromia, and, in particular, one that is more suitable for commercial use. Otherwise, manufacturers may find it too difficult and/or unpredictable to design and market products and treatment regimens for the diverse array of consumers who typically use their products. Similarly, in some instances, it may be desirable for consumers to self-diagnose, and thus it would be desirable for the method and system to be user friendly, for example, in a commercial setting such as a retail store.

›BRIEF DESCRIPTION OF THE DRAWINGS

The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.

FIG. 1 is an illustration of various portions of a human face.

FIGS. 2A and 2B illustrate examples of the portion of the periorbital region affected by Type I periorbital dyschromia.

FIGS. 3A and 3B illustrate examples of portion of the periorbital region affected by Type II periorbital dyschromia.

FIGS. 4A and 4B illustrate examples of portion of the periorbital region affected by Type III periorbital dyschromia.

FIGS. 5A, 6A and 7A are images of a test subject captured with a digital camera.

FIGS. 5B, 6B and 7B are Brown channel images of a test subject.

FIGS. 5C, 6C and 7C are Red channel images of a test subject.

FIGS. 5D, 6D and 7D illustrate the location of the periorbital dyschromia seen in FIGS. 5B, 6B and 7B , respectively.

FIGS. 5E, 6E and 7E illustrate the location of the periorbital dyschromia seen in FIGS. 5C, 6C and 7C , respectively.

FIG. 8 is a 20× micrograph of a skin tissue sample from a subject exhibiting No Dyschromia.

FIG. 9 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type I periorbital dyschromia.

FIG. 10 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type II periorbital dyschromia.

FIG. 11 is a 20× micrograph of a skin tissue sample from a subject exhibiting Type III periorbital dyschromia.

FIG. 12 illustrates the Fontana-Masson positive bodies observed per field of view for each type of periorbital dyschromia and a No Dyschromia condition.

FIG. 13 illustrates the normalized PTCA amount measured for each type of periorbital dyschromia and a No Dyschromia condition.

FIG. 14 illustrates an example of a masked region corresponding to Zone 1 .

FIG. 15 illustrates an example of a masked region corresponding to Zone 2 .

FIG. 16 illustrates an example of a masked region corresponding to Zone 4 .

FIG. 17 illustrates an example of a masked region corresponding to the cheek.

FIG. 18 illustrates an example of a masked region corresponding to the cheek.

FIG. 19 shows a comparison of the R values for different types of periorbital dyschromia in Zone 1 .

FIG. 20 is a comparison of the B values for different types of periorbital dyschromia in Zone 1 .

FIG. 21 is a comparison of the G values for different types of periorbital dyschromia in Zone 1 .

FIG. 22 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 1 .

FIG. 23 is a comparison of the R values for different types of periorbital dyschromia in Zone 2 .

FIG. 24 is a comparison of the G values for different types of periorbital dyschromia in Zone 2

FIG. 25 is a comparison of the B values for different types of periorbital dyschromia in Zone 2 .

FIG. 26 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 2 .

FIG. 27 is a comparison of the R values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2 , in combination).

FIG. 28 is a comparison of the G values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2 , in combination).

FIG. 29 is a comparison of the B values for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2 , in combination).

FIG. 30 is a comparison of the B/G ratios for different types of periorbital dyschromia in Zone 4 (i.e., Zones 1 and 2 , in combination).

›SUMMARY OF THE INVENTION

In order to provide a solution to the aforementioned problems, disclosed herein is a method of classifying periorbital dyschromia comprising providing a first predetermined imaging value for a first type of periorbital dyschromia, a second predetermined imaging value for a second type of periorbital dyschromia, and a third predetermined imaging value for a third type of periorbital dyschromia. The method includes indentifying skin in a periorbital region of a person comprising periorbital dyschromia and measuring an imaging value of at least a portion of the identified skin. The measured imaging value is compared to the predetermined imaging values, and the person is classified as having the first type of periorbital dyschromia when the measured image value corresponds to the first predetermined imaging value, as having the second type of periorbital dyschromia when the measured imaging value corresponds to the second predetermined imaging value, or as having the third type of periorbital dyschromia when the measured imaging value corresponds to the third predetermined imaging value.

›DETAILED DESCRIPTION OF THE INVENTION

All percentages are by weight of the personal-care composition, unless otherwise specified. All ratios are weight ratios, unless specifically stated otherwise. All numeric ranges are inclusive of narrower ranges; delineated upper and lower range limits are interchangeable to create further ranges not explicitly delineated. The number of significant digits conveys neither limitation on the indicated amounts nor on the accuracy of the measurements. All measurements are understood to be made at about 25° C. and at ambient conditions, where “ambient conditions” means conditions under about one atmosphere of pressure and at about 50% relative humidity.

›Definitions · 1 of 10

“Connectivity map” and “C-map” refer broadly to devices, systems, articles of manufacture, and methodologies for identifying relationships between cellular phenotypes or cosmetic conditions, gene expression, and perturbagens, such as cosmetic actives. A description of connectivity mapping and methods of using connectivity mapping to identify genes and/or compositions of interest can be found in U.S. Publication No. 2012/0283112 titled “Systems and Methods For Identifying Cosmetic Agents For Skin Care Compositions” filed by Binder, et al., on Feb. 22, 2012 and U.S. Publication Nos. 2013/0259816, 2013/0261006, 2013/0261024 and 2013/0261007 all filed by Hakozaki, et al., on Mar. 27, 2013.

“Cosmetic” means providing a desired visual effect on an area of the human body. The visual cosmetic effect may be temporary, semi-permanent or permanent. Some non-limiting examples of “cosmetic products” include products that leave color on the face, such as foundation, mascara, concealers, eye liners, brow colors, eye shadows, blushers, lip sticks, lip balms, face powders, solid emulsion compact, and the like.

“Cosmetic agent” means any substance, as well any component thereof, intended to be rubbed, poured, sprinkled, sprayed, introduced into, or otherwise applied to a mammalian body or any part thereof. Cosmetic agents may include substances that are Generally Recognized as Safe (GRAS) by the US Food and Drug Administration, food additives, and materials used in non-cosmetic consumer products including over-the-counter medications. In some embodiments, cosmetic agents may be incorporated in a cosmetic composition comprising a dermatologically acceptable carrier suitable for topical application to skin. A cosmetic agent includes, but is not limited to, (i) chemicals, compounds, small or large molecules, extracts, formulations, or combinations thereof that are known to induce or cause at least one effect (positive or negative) on skin tissue; (ii) chemicals, compounds, small molecules, extracts, formulations, or combinations thereof that are known to induce or cause at least one effect (positive or negative) on skin tissue and are discovered, using the provided methods and systems, to induce or cause at least one previously unknown effect (positive or negative) on the skin tissue; and (iii) chemicals, compounds, small molecules, extracts, formulations, or combinations thereof that are not known have an effect on skin tissue and are discovered, using the provided methods and systems, to induce or cause an effect on skin tissue.

Some examples of cosmetic agents or cosmetically actionable materials can be found in: the PubChem database associated with the National Institutes of Health, USA; the Ingredient Database of the Personal Care Products Council; and the 2010 International Cosmetic Ingredient Dictionary and Handbook, 13 th Edition, published by The Personal Care Products Council; the EU Cosmetic Ingredients and Substances list; the Japan Cosmetic Ingredients List; the Personal Care Products Council, the SkinDeep database; the FDA Approved Excipients List; the FDA OTC List; the Japan Quasi Drug List; the US FDA Everything Added to Food database; EU Food Additive list; Japan Existing Food Additives, Flavor GRAS list; US FDA Select Committee on GRAS Substances; US Household Products Database; the Global New Products Database (GNPD) Personal Care, Health Care, Food/Drink/Pet and Household database; and from suppliers of cosmetic ingredients and botanicals.

Other non-limiting examples of cosmetic agents include botanicals (which may be derived from one or more of a root, stem bark, leaf, seed or fruit of a plant). Some botanicals may be extracted from a plant biomass (e.g., root, stem, bark, leaf, etc.) using one more solvents. Botanicals may comprise a complex mixture of compounds and lack a distinct active ingredient. Another category of cosmetic agents are vitamin compounds and derivatives and combinations thereof, such as a vitamin B3 compound, a vitamin B5 compound, a vitamin B6 compound, a vitamin B9 compound, a vitamin A compound, a vitamin C compound, a vitamin E compound, and derivatives and combinations thereof (e.g., retinol, retinyl esters, niacinamide, folic acid, panthenol, ascorbic acid, tocopherol, and tocopherol acetate). Other non-limiting examples of cosmetic agents include sugar amines, phytosterols, hexamidine, hydroxy acids, ceramides, amino acids, and polyols.

“Data architecture” refers generally to one or more digital data structures comprising an organized collection of data. In some embodiments, the digital data structures can be stored as a digital file (e.g., a spreadsheet file, a text file, a word processing file, a database file, etc.) on a computer readable medium. In some embodiments, the data architecture is provided in the form of a database that may be managed by a database management system (DBMS) that is be used to access, organize, and select data (e.g., instances and gene expression signatures) stored in a database.

“Disposed” refers to an element being located in a particular place or position relative to another element.

“Effective amount” means an amount of a compound or composition sufficient to significantly induce a positive or desired benefit, (e.g., a positive skin or feel benefit, reverse the expression of a gene, group of genes and/or gene signature), including independently or in combinations the benefits disclosed herein, but low enough to avoid serious side effects, i.e., to provide a reasonable benefit to risk ratio, within the scope of sound judgment of the skilled artisan.

“Gene expression signature” refers to a rationally derived list, or plurality of lists, of genes representative of a skin tissue condition or a skin agent. In specific contexts, the skin agent may be a benchmark skin agent or a potential skin agent. Thus, the gene expression signature may serve as a proxy for a phenotype of interest for skin tissue. A gene expression signature may comprise genes whose expression, relative to a normal or control state, is increased (up-regulated), whose expression is decreased (down-regulated), and combinations thereof. Generally, a gene expression signature for a modified cellular phenotype may be described as a set of genes differentially expressed in the modified cellular phenotype over the unmodified cellular phenotype. A gene expression signature can be derived from various sources of data, including but not limited to, from in vitro testing, in vivo testing and combinations thereof. In some embodiments, a gene expression signature may comprise a first list representative of a plurality of up-regulated genes of the condition of interest and a second list representative of a plurality of down-regulated genes of the condition of interest.

›Definitions · 2 of 10

“Gene expression profiling” refers to the measurement of the expression of multiple genes in a biological sample using any suitable profiling technology. For example, the mRNA expression of thousands of genes may be determined using microarray techniques. Other emerging technologies that may be used include RNA-Seq or whole transcriptome sequencing using NextGen sequencing techniques. Gene expression profiling may be used to generate a gene expression signature.

“Joined” means configurations whereby an element is directly secured to another element by affixing the element directly to the other element, and configurations whereby an element is indirectly secured to another element by affixing the element to intermediate member(s) that in turn are affixed to the other element.

“Keratinous tissue,” means keratin-containing tissue layers disposed as the outermost protective covering of mammals which includes, but is not limited to, skin, hair, and nails.’

“Lateral” means a direction that is generally perpendicular to an imaginary centerline that bisects the human body into right and left mirror images. Directions that are within forty-five degrees of being perpendicular to the imaginary centerline are considered lateral.

“Longitudinal” means a direction that is generally parallel to an imaginary centerline that Bisects the human body into right and left mirror images. Directions that are within forty-five degrees of being parallel to the imaginary centerline are considered longitudinal.

“Microarray” refers broadly to any ordered array of nucleic acids, oligonucleotides, proteins, small molecules, large molecules, and/or combinations thereof on a substrate that enables gene expression profiling of a biological sample. Non-limiting examples of microarrays are available from Affymetrix, Inc.; Agilent Technologies, Inc.; Illumina, Inc.; GE Healthcare, Inc.; Applied Biosystems, Inc.; Beckman Coulter, Inc.; etc.

“Periorbital” means around the orbit of the eye. The periorbital region of a person is the area of the face generally disposed around the eye socket and typically lies between the bottom of the brow and the top of the cheek in the longitudinal direction and between the bridge of the nose and the temple in the lateral direction.

“Periorbital dyschromia” is a condition that occurs when the tone of skin in the periorbital region of person is noticeably different from the tone of skin in a nearby portion of the face, such as the cheek, nose, forehead, temple and/or another portion of the periorbital region. Perioribital dyschromia is bilateral, (i.e., it occurs in the periorbital region of both sides of the face). Periorbital dyschromia may appear as a result of hyperpigmented and/or hypopigmented skin disposed in the periorbital region. Periorbital dyschromia may be identified and/or classified according to one or more of the indicators described in more detail below. Periorbital dyschromia herein is classified into one of three types (i.e., Type I, Type II or Type III). The three types of periorbital dyschromia are described and defined in more detail below, and can be readily determined in accordance with the methods herein.

“Personal care composition” means a cosmetic composition or a skin care composition suitable. Is it to be appreciated that a personal care composition may provide both a cosmetic benefit and a skin health benefit,

“Reverse,” when referring to the gene expression of a gene, means that the expression of the gene is changed such that it is opposite of the expression indicated in a gene signature in a significant way (e.g., p-value <0.1, p-value <0.05, p-value <0.01, p-value <0.001, or p-value <0.0001 as determined by a statistical test like ANOVA or to a t-test). For example, if a gene expression signature indicates that a particular gene is up-regulated, then reversing the expression of the gene can mean that the gene is down-regulated relative to the indicated gene expression signature with a p-value of less than 0.05 as determined by a statistical test like ANOVA or t-test. When referring to gene expression signatures, the term “reversing” depends on the method used to determine the change in gene expression signature. For example, when using connectivity mapping, a connectivity score is generated to represent an amount of differential expression relative to a known gene expression signature, e.g., stored in a data architecture, and the connectivity score can be used as a measure of the amount of reversal in a gene expression signature in a significant way (e.g., p-value <0.1, p-value <0.05, p-value <0.01, p-value <0.001, or p-value <0.0001.

“Skin” means the outermost protective covering of mammals that is composed of cells such as keratinocytes, fibroblasts and melanocytes. Skin includes an outer epidermal layer and an underlying dermal layer. Skin may also include hair and nails as well as other types of cells commonly associated with skin, such as, for example, myocytes, Merkel cells, Langerhans cells, macrophages, stem cells, sebocytes, nerve cells and adipocytes.

“Skin care” means regulating and/or improving skin condition. Some nonlimiting examples of skin care benefits include improving skin appearance and/or feel by providing a smoother, more even appearance and/or feel; increasing the thickness of one or more layers of the skin; improving the elasticity or resiliency of the skin; improving the firmness of the skin; and reducing the oily, shiny, and/or dull appearance of skin, improving the hydration status or moisturization of the skin, improving the appearance of fine lines and/or wrinkles, improving skin texture or smoothness, improving skin exfoliation or desquamation, plumping the skin, improving skin barrier properties, improve skin tone, reducing the appearance of redness or skin blotches, and/or improving the brightness, radiancy, or translucency of skin. Some nonlimiting examples of “skin care products” include skin creams, moisturizers, lotions, and body washes.

“Skin-care active” means a compound or combination of compounds that, when applied to skin, provide an acute and/or chronic benefit to skin or a type of cell commonly found therein. Skin-care actives may regulate and/or improve skin or its associated cells (e.g., improve skin elasticity; improve skin hydration; improve skin condition; and improve cell metabolism).

›Definitions · 3 of 10

“Skin-care composition” means a composition that regulates and/or improves skin condition.

“Skin tone” refers to the perceived color or pigmentation of skin, especially with regard to the evenness of the coloration or pigmentation. “Skin tone” may also include other characteristics of skin that contribute to a consumer perception of overall tone. For example, pore size and distribution, and skin texture may also be considered attributes of overall skin tone.

“Software” and “software application” mean one or more computer readable and/or executable instructions that cause a computing device or other electronic device to perform functions, actions, and/or behave in a desired manner. The instructions may be embodied in one or more various forms like routines, algorithms, modules, libraries, methods, and/or programs. Software may be implemented in a variety of executable and/or loadable forms and can be located in one computer component and/or distributed between two or more communicating, co-operating, and/or parallel processing computer components and thus can be loaded and/or executed in serial, parallel, and other manners. Software can be stored on one or more computer readable medium and may implement, in whole or part, the methods and functionalities of the present invention.

“Topical application” means to apply or spread the compositions of the present invention onto the surface of the keratinous tissue.

Before now, the underlying causes of periorbital dyschromia were not particularly well elucidated. However, it has unexpectedly been found that there are common themes associated with periorbital dyschromia that can lend themselves to differentiation based on a variety of relatively straightforward evaluation techniques. Previous attempts to classify periorbital dyschromia did not appreciate that periorbital dyschromia can be grouped into distinct categories based on the visual evaluation, imaging, biomarker, histology, and/or genetic analysis techniques disclosed herein. Based on these newly discovered distinctions, it is believed that the methods and systems described herein, individually and/or collectively, may enable the development and/or marketing of improved cosmetic products and/or treatment regimens particularly suited for treating different types of periorbital dyschromia.

Visual Evaluation

Periorbital dyschromia may be classified into three different types as well as a “No Dyschromia” condition using visual evaluation techniques. In particular, the location and/or tone(s) of a dyschromic portion of periorbital skin may be analyzed visually to determine whether perirorbital dyschromia is present and, if present, which type is present. For example, a No Dyschromia condition may be visually characterized by the lack of an uneven or discontinuous skin tone in the periorbital region. Visual evaluation may be done by an expert grader (i.e., someone trained to visually classify periorbital dyschromia), for example, as described in more detail in the Methods section below, or the visual classification may be done by a non-expert (e.g., a consumer who self-diagnoses) based on, for example, a set of instructions or a visual cue.

FIG. 1 illustrates the periorbital region 10 of a human face 5 divided into three zones. Zone 1 11 is disposed generally under the eye in the longitudinal direction (represented by the arrow Y) and extends under the eye in the lateral direction (represented by the arrow X) from the inner canthus 4 (i.e., the corner of the eye proximate the nose 20 ) to an area under the eye that is less than the complete distance to the outer canthus 6 (i.e., the corner of the eye spaced furthest from the nose). For example, as illustrated in FIG. 1 , Zone 1 11 may extend from the inner canthus 4 to about the middle of the undereye portion of the periorbital region 10 . But it is to be appreciated that, in some individuals, Zone 1 may extend more than halfway or less than halfway across the under-eye region, but typically not more than 90% of the distance from the inner canthus 4 to the outer canthus 6 . Zone 2 12 extends from the distal edge of Zone 1 11 (i.e., the portion of Zone 1 furthest from the nose 20 in the lateral direction) to the outer canthus 6 of the eye. Zone 3 is disposed above the eye and extends laterally from the inner canthus 4 to the outer canthus 6 . Zone 3 13 also extends generally in the longitudinal direction Y from the upper eyelid to the bottom of the eyebrow. In some embodiments, it may be desirable to use a target portion of skin disposed on the cheek 7 as a reference or control when evaluating the location and/or tones of periorbital dyschromia.

“Type I” periorbital dyschromia may be visually characterized by continuous discoloration of both the upper and lower eyelid skin. The dyschromic periorbital skin associated with Type I periorbital dyschromia typically includes substantially uniform brown, yellow and/or orange tones, which may resemble the color of tanned skin or an age spot. Additionally or alternatively, Type I periorbital dyschromia may be visually characterized by being generally present in Zones 1 , 2 and 3 of the periorbital region of a person.

“Type II” may be visually characterized by continuous discoloration of the lower eyelid skin. The discolored periorbital skin associated with Type II periorbital dyschromia typically includes substantially uniform purple, pink and/or bluish tones, which may resemble bruised skin. Additionally or alternatively, Type II periorbital dyschromia may be visually characterized by being generally present in Zone 1 of the periorbital region and generally absent from Zone 2 and Zone 3 .

“Type III periorbital dyschromia” typically includes a combination of characteristics of Types I and II, such as color and location in the periorbital region. In some instances, Type III perioribital dyschromia may be characterized by discontinuous discoloration of the undereye portion of the periorbital region, which is different from the more uniform discoloration associated with Types I and II. The patches of discolored periorbital skin associated with Type III periorbital dyschromia are generally present in Zone 1 and Zone 2 and may also be present in the inner portion of Zone 3 (i.e., the portion of Zone 3 that is closest to the nose).

›Definitions · 4 of 10

FIGS. 2A and 2B illustrate examples of Type I periorbital dyschromia, which is represented by the shaded portions 200 and 201 , respectively, of the periorbital region. FIGS. 3A and 3B illustrate examples of Type II periorbital dyschromia (i.e., the shaded portions 300 and 301 , respectively, of the periorbital region). FIGS. 4A and 4B illustrate examples of Type III periorbital dyschromia (i.e., the shaded portions 400 and 401 , respectively, of the periorbital region).

Imaging Classification—RGB

Type I, Type II and Type III periorbital dyschromia may be distinguished from one another using known imaging technique such as RGB and/or RBX® color imaging and/or gray scale imaging. An image of the region of interest (“ROI”) (e.g., periorbital region of a person) is captured by an image capture device, and at least a portion of the image is analyzed (e.g., by a computer) and assigned an imaging value based on the analysis. This determined imaging value may then be compared to a predetermined imaging value, which can be a single value or a range of values (e.g., one or more of the RGB values disclosed herein). The predetermined imaging value defines a particular type of periorbital dyschromia, and the comparison enables a user to identify which type of periorbital dyschromia, if any, is exhibited by the person. For example, RGB color imaging uses an additive color model wherein red, green, and blue light are added together in various ways to reproduce a broad array of colors. The RGB color model is particularly suited for sensing, representing, and displaying images in electronic systems such as televisions and computers. RGB is a device-dependent color model, which means that different devices may detect or reproduce a given RGB value differently, since the color elements (such as phosphors or dyes) and their response to the individual R, G, and B levels may vary from manufacturer to manufacturer, or even in the same device over time. Thus, it can be important to use color correction to ensure that an RGB value defines the same color across devices or in the same device over time. Color correction can be readily accomplished by one skilled in the art using commercially available software and techniques.

Classifying periorbital dyschromia according to the imaging classification methods and systems described herein depends on, among other things, the skin tone of an individual. For example, people who are Fitzpatrick I, II and III skin types according to the commonly known Fitzpatrick Scale, may have different color values associated with the different types of periorbital dyschromia as compared to people who are Fitzpatrick skin type IV, V or VI. In some of the examples and descriptions below, the different types of periorbital dyschromia are in relation to people who are Fitzpatrick skin type I, II and/or III (e.g., the imaging values and ratios). However, it is believed, without being limited by theory, that the classification methods and systems herein can be reapplied to people with Fitzpatrick IV, V and VI skin types in the substantially the same manner. In some instances, it may be desirable to normalize the imaging values of one or more zones in the periorbital region to a reference or control value such as an imaging value associated with the cheek. The normalized value may then be used to determine whether periorbital dyschromia is present and, if so, which type.

Type I periorbital dyschromia may be characterized by generally having lower RGB values relative to Types II and III as well as a different ratio of B value to G value (“B/G”). Type II periorbital dyschromia may be characterized by generally having higher RGB values compared to Types I and III. Type III periorbital dyschromia may include characteristics of both Type I and Type II. Tables 1, 2 and 3 below show ranges of color corrected RGB values, B/G ratios, L*a*b* values, chroma values and hue values that may be used to characterize Type I, Type II and Type III periorbital dyschromia, respectively, exhibited by a person having a Fitzpatrick skin type of I, II or III. The values provided in Tables 1, 2 and 3 correspond to a particular portion of the periorbital region referred to as a “mask.” Masks, and in particular Mask A, Mask B and Mask C are described in more detail below in the Imaging Method, which provides a suitable method of determining imaging values.

Imaging Classification—RBX

Attempts have been made in the past to classify periorbital dyschromia based on melanin and/or hemoglobin content, which are believed to be the chromophores primarily responsible for skin tone. For example, some previous attempts used conventional instruments (e.g., Mexameter MX-18) to measure the amount of melanin and hemoglobin in the skin. The measured values are then compared to the different types of periorbital dyschromia observed in test subjects to identify any correlations that might be used in classifying the different types of periorbital dyschromia. However, these past attempts concluded that measuring melanin and hemoglobin in this manner does not provide a useful tool for differentiating periorbital dyschromia.

In contrast with previous findings, it has been found that certain imaging technology such as RBX® brand imaging technology, available from Canfield Scientific, Inc., New Jersey, may provide a suitable distinction between Type I, Type II and Type III periorbital dyschromia, based on differences in the Red Channel and Brown channel images, which can correspond to the melanin and hemoglobin present in the skin. This is an unexpected finding, since previous studies have concluded that using imaging systems to measure colorants or chomophores in the skin does not provide a suitable means for classifying periorbital dyschromia.

RBX® brand imaging technology is based on the premise that skin color is characterized by a limited number of colorants, or chromophores, within the layers of skin. In normal, healthy skin, melanin particles, which are primarily responsible for the overall skin color, are small and uniformly distributed resulting in a smooth, even skin tone. Hemoglobin occurs within the vascular structure at the papillary dermis, a sub-layer of skin, in oxygenated and deoxygenated forms and is responsible for red colorations of skin tone. However, it may not be desirable to quantify skin pigmentation by only measuring the total attenuation of broadband light because, apart from melanin, hemoglobin in skin also absorbs visible light in a wavelength dependent manner. Therefore, methods are required to measure light absorbance in more than one spectral band. RBX® brand imaging technology transforms a conventional RGB image (e.g., captured by a conventional digital camera) into a color space where the Red and Brown channels represent hemoglobin and melanin distribution, respectively.

›Definitions · 5 of 10

In some instances, Type I periorbital dyschromia may be characterized by relatively high Brown and Red channel contrast in the periorbital region as compared to other portions of the face (e.g., cheek, chin, nose or forehead). FIGS. 5A to 5E illustrate an example of Type I periorbital dyschromia observed in an RBX® image. FIG. 5A is a full color image of a test subject captured with a digital camera. As can be seen in FIG. 5A , periorbital dyschromia appears in Zones I, II and III of the periorbital region of the test subject. FIG. 5B shows the Brown Channel image that corresponds to the digital image of FIG. 5A . FIG. 5C shows the Red Channel image that corresponds to the digital image from FIG. 5A . FIG. 5D provides an illustration of the location of the periorbital dyschromia provided in FIG. 5B (i.e., in the Brown channel), and FIG. 5E provides an illustration of the location of the periorbital dyschromia provided in FIG. 5C (i.e., the Red Channel). As can be seen in FIG. 5C , and as illustrated in FIG. 5E , periorbital dyschromia is present in Zones 1 and 2 and in a portion of Zone 3 . However, the periorbital dyschromia appearing in Zone 3 of FIG. 5C is not present in as large an area as the periorbital dyschromia in Zone 3 of FIG. 5B . This may suggest that melanin and hemoglobin both influence the appearance of Type I periorbital dyschromia, but melanin is the more abundant chromophore. FIG. 5E provides an illustration of the periorbital dyschromia that appears in FIG. 5C (i.e., in the Red Channel).

Type II periorbital dyschromia may be characterized by relatively low Brown Channel intensity values in the periorbital skin relative to the surrounding areas of face (e.g., cheek and forehead) and high Red Channel contrast in the periorbital region as compared to other portions of the face. FIGS. 6A to 6E illustrate an example of Type II periorbital dyschromia observed in an RBX®. FIG. 6A is an image of a subject captured with a digital camera. As can be seen in FIG. 6A , periorbital dyschromia appears in Zone 1 , but appears to be substantially absent from Zones 2 and 3 . FIG. 6B shows the Brown channel image that corresponds to the digital image of FIG. 6A . FIG. 6C shows the Red Channel image that corresponds to the digital image of FIG. 6A . FIG. 6D provides an illustration of the location of the periorbital dyschromia provided in FIG. 6B (i.e., in the Brown channel), and FIG. 6E provides an illustration of the location of the periorbital dyschromia provided in FIG. 6C (i.e., the Red Channel). As can be seen in FIG. 6C , and as illustrated in FIG. 6E , periorbital dyschromia is visible in Zone 1 , but appears to be substantially absent from Zones 2 and 3 . This may suggest that melanin does not play as significant a role as hemoglobin in Type II periorbital dyschromia.

Type III periorbital dyschromia may be characterized by discontinuous patches of Brown Channel and Red channel intensity in the periorbital region. FIGS. 7A to 7E illustrate an example of Type III periorbital dyschromia observed in an RBX® image. FIG. 7A is an image of a test subject captured with a digital camera. As can be seen in FIG. 7A , periorbital dyschromia appears in Zones 1 and 3 , but appears to be substantially absent from Zone 2 . FIG. 7B shows the Brown channel image that corresponds to the digital image from FIG. 7A . FIG. 7C shows the Red channel image that corresponds to the digital image from FIG. 7A . FIG. 7D provides an illustration of the location of the periorbital dyschromia provided in FIG. 7B (i.e., in the Brown channel), and FIG. 7E provides an illustration of the location of the periorbital dyschromia provided in FIG. 7C (i.e., the Red Channel). As can be seen in FIG. 7B , and as illustrated in FIG. 7D , periorbital dyschromia appears in Zones 1 and 3 of the periorbital region of the test subject. And as can be seen in FIG. 7C , and as illustrated in FIG. 7E , periorbital dyschromia appears in Zone 1 , but appears to be substantially absent from Zones 2 and 3 .

Histology

Type I, Type II and Type III periorbital dyschromia may be distinguished from one another using histological evaluation techniques that include, for example, sectioning and staining, followed by examination under a microscope (e.g., light or electron). In particular, it has been found that the abundance and/or location of certain cellular structures (e.g., melanin) within skin biopsy samples obtained from a discolored area of periorbital skin may be used to distinguish Type I, Type II and Type III periorbital dyschromia from one another. Skin tissue samples for use herein may be obtained, sectioned and/or stained according to any suitable method in the art. The Biopsy Method described in more detail below is an example of a suitable method of sample collection, sectioning and staining. Examples of conventional stains suitable for use herein include hematoxylin and eosin stain (“H&E stain”) and Fontana-Masson stain. H&E stain is a known for use in histology and involves the application of hemalum, which is a complex formed from aluminum ions and oxidized haematoxylin, to a tissue sample. The application of hemalum colors the nuclei of the cells in the sample dark blue or purple. The nuclear staining is followed by counterstaining with an aqueous or alcoholic solution of eosin Y, which colors eosinophilic structures such as cytoplasm in various shades of red, pink and orange. Fontana-Masson stain uses ammoniacal silver nitrate to detect cellular structures in a tissue sample that are capable of reducing the silver nitrate to metallic silver, which stains the structure black.

FIGS. 8 to 11 are micrograph images at 20× magnification of H&E-stained biopsy samples from skin disposed in the periorbital region of human test subjects. The samples were collected, sectioned and stained according to the Biopsy Method described in more detail below. Each test subject was classified as exhibiting Type I, Type II, Type III or No Dyschromia by an expert grader. The skin tissue sample shown in FIG. 8 is from a test subject classified as exhibiting No Dyschromia, and thus may serve as a suitable control. The dark (i.e., purple) bodies shown in FIG. 8 are nuclei of the various cells commonly disposed in the dermis and epidermis of an individual. The lighter (i.e., red/pink) stained areas between the nuclei corresponds to cytoplasm, connective tissue and glycoproteins.

›Definitions · 6 of 10

The skin tissue sample shown in FIG. 9 is from a test subject classified as exhibiting Type I periorbital dyschromia. The white arrowheads shown in FIG. 9 point to deposits, which are brown in color when seen in a color micrograph, disposed around the nuclei of some of the cells in the sample. When the tissue samples are stained with Fontana-Masson stain, the deposits appear black (“Fontana-Masson positive deposits”), which indicates that they may be melanin. This is surprising because melanin is generally not associated with the dermis and is more commonly found in the epidermis. As can be seen in FIG. 9 , the Fontana-Masson positive deposits are generally disposed around the nuclei of cells that appear to be clustered together underneath the epidermal-dermal junction. The clustered cells are believed to be fibroblasts, which account for the majority of cells typically found in a healthy dermis. Healthy fibroblasts generally appear as elongated, flat cells, but the clustered cells in FIG. 9 are round when viewed under a light microscope, which indicates that they may not be healthy fibroblasts. Thus, it is believed, without being limited by theory, that the presence of these melanin deposits in the dermis may be related to an underlying biological cause of Type I perioribital dyschromia. In particular, the round clustered appearance of the fibroblasts may be associated with an inflammation response. In view of this discovery, it may be desirable to provide a method and system of classifying periorbital dyschromia based, at least in part, on dermal melanin content. It may also be desirable to configure products and regimens suited for treating Type I periorbital dyschromia to address the presence of melanin in the dermis and/or the factors that may influence the presence of melanin in the dermis.

In addition to the discovery of unexpected amounts of Fontana-Masson positive deposits in the dermis, there also appeared to be an overabundance of melanin in the epidermis of periorbital skin tissue samples taken from Type I individuals. Thus, it may be desirable to tailor products for treating Type I periorbital dyschromia to include a cosmetic active that addresses the presence of excess melanin in the epidermis.

The skin tissue sample shown in FIG. 10 is a sample from a test subject classified as exhibiting Type II periorbital dyschromia. The Fontana-Masson positive deposits that can be seen in the dermis of the Type I sample of FIG. 9 are absent from the dermis of the Type II sample in FIG. 10 . Thus, the underlying biological causes of Type I and Type II periorbital dyschromia may be different from one another, which is important since products and treatments suitable for one type of periorbital dyschromia may not suitable for another type. In particular, products and treatments for Type II periorbital dyschromia may not need to address the presence of melanin in the dermis.

Examination of the skin tissue samples taken from Type II individuals also showed a lack of melanin in the epidermis. Thus, it is also important to recognize that periorbital dyschromia may be influenced not only by hyperpigmentation (i.e., too much pigmentation), as suggested by some researchers, but surprisingly appears to be influenced by hypopigmentation (i.e., not enough pigmentation) as well.

The skin tissue sample shown in FIG. 11 is a sample obtained from a test subject classified as exhibiting Type III periorbital dyschromia. As indicated by the white arrowheads in FIG. 11 , there are Fontana-Masson positive deposits present around the nuclei of some cells in the dermis, but not as many as seen in the Type I sample shown in FIG. 9 . It is believed, without being limited by theory, that Type III periorbital dyschromia may occur as a result of one or more factors from Type I and Type II periorbital dyschromia acting to produce periorbital dyschromia that exhibits at least some of the characteristics of both of these types. For example, the unexpected presence of melanin in the dermis may indicate that Type III periorbital dyschromia shares a common underlying cause with Type I, but less severe as evidenced by a lower amount of dermal melanin relative to Type I. Thus, products and treatments suitable for treating Type III periorbital dyschromia may need to address the underlying causes of Type I and/or Type II periorbital dyschromia, but perhaps not to the same extent. For example, a product suitable for treating Type I periorbital dyschromia that includes an active for addressing the presence of melanin in the dermis may not need to include as much of the active.

Biomarker

Type I, Type II and Type III periorbital dyschromia may be distinguished from one another by collecting and analyzing the biomarkers present in periorbital skin. In particular, it has been found that the presence, absence and/or abundance of certain molecules in the epidermis of periorbital skin can be useful in distinguishing Type I, Type II and Type III periorbital dyschromia from one another. An example of such a molecule is pyrrole-2,3,5-tricarboxylic acid (“PTCA”), which is formed as a result oxidative degradation of eumelanin. It has been found that Type I and Type III periorbital dyschromia have higher PTCA levels than Type II, and that Type I may exhibit higher PTCA levels than Type III. FIG. 13 illustrates the comparison between PTCA levels of samples obtained from a subject classified as No Dyschromia 382 , a subject who classified as Type I periorbital dyschromia 384 , 2) a subject classified as Type II periorbital dyschromia 386 , and 3) a test subject classified as Type III periorbital dyschromia 388 . As illustrated in the chart 550 of FIG. 13 , the PTCA levels of the Type I 384 and Type III 388 subjects was higher than the No Dyschromia 382 and the Type II subject 386 by a statistically significant amount. In contrast, the PTCA level of the Type II subject 386 was not higher than the No Dyschromia 382 by a statistically significant amount. PTCA levels herein are determined according to the Tape Stripping method described in more detail below.

›Definitions · 7 of 10

Gene Expression

Type I, Type II and Type III periorbital dyschromia may be distinguished from one another by analyzing the expression of certain genes, individually or collectively, in the dermis and/or epidermis of periorbital skin. The gene expression signature of a periorbital skin sample may be obtained by any suitable means known in the art. For example, genetic material may be obtained from a tissue sample provide by a donor (e.g., full thickness skin biopsy that exhibits a condition of interest) and subsequently processed using any suitable technology such as, for example, microarray analysis or NextGen sequencing to provide a gene expression signature. The gene expression signatures of Type I, Type II and Type III periorbital dyschromia can then be compared to one another and/or a control to identify the differences in gene expression. Example 4 below provides an example of gene expression signatures associated with each of Type I, Type II and Type III periorbital dyschromia.

It may be desirable to distinguish the different types of periorbital dyschromia based on biological themes that correspond to the expression of certain genes, combinations of genes and/or gene families. That is, a technique sometimes referred to as theme analysis may be used to identify biological or phenotypic themes associated with the gene expression data that correspond to the different types of periorbital dyschromia. Theme analysis is a statistical analysis-based method for detecting biological patterns in gene expression data. The method uses an ontology of controlled vocabulary terms developed by the Gene Ontology (“GO”) Consortium [Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet, 25, 25-29] that describe the biological processes, molecular functions and cellular components associated with gene products. Analysis involves statistical comparison of a regulated list of genes and a larger reference list of all the expressed genes, to determine if genes annotated to specific GO terms are significantly enriched in the regulated list. This analysis may reveal biological patterns when multiple genes associated with a given GO term occur on the regulated list at a frequency greater than expected by chance. Such analysis may be performed using Theme Extractor proprietary software and an algorithm that calculates a p-value of each ontology term. Data may be analyzed for statistical significance, for example, by the Fisher's Exact Test. Conventional approaches and statistical methods such as, for example, Gene Set Enrichment Analysis described by Subramanian, A., et al., in “Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles,” Proc. Natl. Acad Sci U.S.A, 102, 15545-155501 (2005) are suitable for conducting theme analysis herein.

Methods and Systems for Classifying Periorbital Discoloration

In some instances, the method herein includes indentifying a target portion of skin in the periorbital region of a person, evaluating the target skin portion based on the relevant characteristics described herein and classifying the person as having Type I, Type II or Type III periorbital dyschromia, if one or more characteristics associated with the relevant type of periorbital dyschromia are met. In some instances, the method may include classifying the type of periorbital dyschromia based solely on one of the foregoing distinguishing characteristics (i.e., visual characteristics such as RGB and/or RBX values, biomarkers, histology or gene expression). In some instances, the method includes classifying periorbital dyschromia based on a combination of two or more of the foregoing characteristics (e.g., visual and gene expression characteristics, visual and biomarker characteristics, or visual and histology characteristics).

Systems suitable for classifying periorbital discoloration herein may include an image capture device, an image analysis device, a means for communicating a type of periorbital dyschromia to a user of the system and, optionally, a set of instructions for using the system. The type of periorbital dyschromia may be selected from Type I, Type II and Type III as described herein. A user may also be classified as having No Dyschromia with the present system. The system may include a camera or similar device capable of capturing digital images of sufficient quality (e.g., greater than 8 megapixels per inch) for analysis by the image analysis device. The image capture device may be configured to store and/or transfer raw digital images and JPG digital image files. In some instances, the image analysis device may be a computer in electronic communication with the image capture device. The image analysis device should be capable of receiving and analyzing a raw digital image and/or a JPG image and converting the RGB color values of each pixel in the image to a more suitable color scale such as L*a*b* and, optionally, color and/or hue values (e.g., C* and h* values). Suitable image processing software (e.g., stored directly on the image analysis device or available for use or on the internal may be used by the image analysis device to process and/or analyze various aspects of the image. In some instances, it may be desirable to normalize the pixel colors of the image analysis system to reduce variation between images captured by different devices (e.g., using known color correction techniques and/or software). An exemplary method of normalizing an image analysis device is described in more detail below. Of course, it is to be appreciated that other suitable normalization techniques known in the art may be used.

The image analysis system may be configured to classify each pixel (or a predetermined number of pixels) into one of three groups (e.g., Type I, Type II and No Dyschromia) based on the color of the pixel. The image analysis system may then calculate the percent total number of pixels in each classification and determine which type of periorbital dyschromia is present or whether any periorbital dyschromia is present, based on the percentage of pixel types from each group. After determining the type of periorbital dyschromia present, if any, the system communicates the results of the analysis to the user, for example, visually via a monitor or television, audibly via a speaker or by any other suitable communication means known in the art.

›Definitions · 8 of 10

In some embodiments, it may be desirable to place the system in a commercial environment such as a retail store to enable consumers to self-diagnose. In this way, a consumer would know which type of periorbital discoloration they might have and can select the appropriate cosmetic product to treat it.

Test Methods

Visual Classification Method

This method provides a suitable means to visually evaluate and classify periorbital dyschromia using expert graders. The visual evaluation can be done in-person as well as from images (e.g., cross-polarized images).

In-Person Grading

Prior to visual evaluation, the subjects are asked to wash their face and remove any make-up, especially eye make-up. The hair of the subject is covered with a hairnet and the head and shoulders of the subject are covered with black cloth. The subjects are asked to sit between two sets of lights that illuminate each side of their face without casting shadows or causing shine in the area of the eye. The expert grader assesses the subjects from a distance of approximately 60 cm, during which time subjects are asked to relax and refrain from making any facial expressions. The expert grader evaluates area, contrast and color of the periorbital region of the subject when classifying.

Image Grading

When visually evaluating and classify periorbital dyschromia from images, it may be desirable to capture an image of the region of interest of the test subject. To capture an image, prepare the subject by covering the hair of the subject with a hairnet and covering the head and shoulders of the subject with a black cloth. All jewelry that can be seen in an image is removed. The subject is seated on the adjustable stool and rotated towards the chin rest. The operator adjusts the stool such that the subject's chin rests comfortably on the chin rest. Front view images are captured using the Cross Polarized lighting modality. The images are evaluated in a dark room using professional color calibrated LCD monitors such as LACIE brand monitors. Graders are positioned approximately 60 cm from the monitor. Attributes such as area, intensity, contrast, color and continuity are evaluated for each subject.

Imaging Method

This method provides a suitable means for capturing a reproducible and analyzable image. Any suitable image capture device along with imaging software and other associated ancillary equipment (e.g., computer and lights) may be used. A particularly suitable imaging system is the Visia-CR® brand imaging system, available from Canfield Scientific, New Jersey. The Visia® brand imaging system incorporates a Canon® brand EOS-1Ds Mk III SLR camera, which includes a CMOS sensor and provides 21.1 Mega pixel resolution (14-bit A/D converter).

Images may be collected under different lighting modalities using standard light, UV, cross-polarization, parallel-polarization or a combination of these. For example, the values and ranges described herein are reported using a (D65/2) light source. One skilled in the art will appreciate that these values can be reported at a wide range of different illuminations (D50, D75, Illuminant A, F2, F7, F11, TL84, etc. or 2 or 10 degree observer) according to well known conversion methods, and when such conversions occur, the color values will typically change accordingly. In other words, even though the actual limits and/or ranges may change based on the conditions under which the image is captured, similar relationships among the values and ranges will still be seen. For example, if the camera has lower spectral sensitivity in the red channel than the camera described herein, the R channel response may be lower and the corresponding L*a*b*C*h* (“LabCh”) color values will be different, which in this case may result in lower a* values, higher b* values, and/or higher hues. Accordingly different camera sensitivities, lightings and relevant exposures are contemplated by the method herein, and the actual limits and/or ranges disclosed herein may vary according to the particular circumstances in which the image is captured without departing from the scope of the systems and/or methods described herein.

In preparation for image capture, test subjects are required to wash their faces and wait for at least 15 minutes to let their face dry. The hair of the subject is covered with a hairnet and the head and shoulders of the subject are covered with a black cloth. All jewelry that can be seen in an image area of interest is removed. The subject is positioned such that the subject's chin is resting comfortably on the chin rest of the imaging system, and a front image of the face (as opposed to a left-side or right-side image) can be suitably captured by the image capture device. After the subject is positioned, one or more images are captured (e.g., between 1 and 24, 2 and 20 or even between 3 and 15) with the subject's eyes open. It can be important to ensure that the subject's eyes are open when the image is captured, otherwise the closed upper eyelid may cause an inaccurate pigmentation reading. The captured image(s) are processed by converting the raw image to a .jpg file format.

Next, the .jpg format image is analyzed by a computer with suitable image analysis software. In some instances, it may be desirable to analyze only a portion of the image (e.g., Zone 1 , 2 and/or 3 of the periorbital region). The portion of the image to be analyzed may be “masked,” for example, as shown in FIGS. 14 to 18 , using image editing software such as Photoshop® or ImageJ®. The masked region can then be isolated and analyzed as a separate image. FIG. 14 illustrates an example of a masked region corresponding to Zone 1 , which is referred to herein as “Mask A.” FIG. 15 illustrates an example of a masked region corresponding to Zone 2 , which is referred to herein as “Mask B.” FIG. 16 illustrates an example of a masked region corresponding to Zones 1 and 2 , which is referred to herein as “Mask C.” FIGS. 17 and 18 both illustrate an example of a masked region corresponding to the cheek. It is to be appreciated that the image need not necessarily be masked for suitable analysis, and in some instances the entire image may be analyzed. In some instances, it may be desirable to reduce the size of the image, mask and/or region of interest by several pixels (e.g., between 5 and 15 pixels) around the outer edge of the image where some shadowing may occur.

›Definitions · 9 of 10

In some instances, it may be desirable to convert some or all of the RGB values in the image or a portion thereof to LabCh values. The LabCh values can be calculated using a suitable RGB conversion tool at D65 Illuminant and 2 degree observer (i.e., D65/2). This conversion can be performed by software installed on the computer or a suitable conversion tool may be found online. The conversion from RGB values to LabCh values can be performed on the entire image, a portion thereof or on one or more individual pixels. The resulting LabCh values may be averaged to provide average values for the image, mask or region of interest.

In some instances, the pixels may be analyzed individually and each pixel classified as corresponding to a particular type of periorbital dyschromia based on one or more of the LabCh values. When analyzed individually, the pixels may be analyzed according to their distribution across the different types of periorbital dyschromia. An example of classifying periorbital dyschromia based on individual pixel distributions is described below in Example 2. Since color may be perceived as being relative, depending on, for example, which instruments and/or imaging system is used, it can be important to color correct the masked region for each subject using a suitable color correction technique (e.g., according to International Color Consortium standards and practices), which helps make the color determination by the system less instrument specific. In some instances, it may be desirable to normalize the color in a region of interest (e.g., a masked region) to the basal skin tone of a nearby region (e.g., cheek). For example, the basal skin tone of the cheek may be obtained by masking a region of interest in the cheek (e.g., as illustrated in FIG. 20 or 21 ) and converting the RGB values in the masked region to L*a*b*C*h* values as described above. The resulting basal skin tone values for the cheek may then be subtracted from the corresponding values in the region of interest to provide normalized values. Color normalization may be performed on the entire region of interest (e.g., an average value for the ROI) or on a pixel by pixel basis for some or all of the pixels in the ROI, which may be 200,000 or more pixels. The following formula provides an illustration of color normalization.

DL 1=Lpixel1−Lcheekave

DC 1=Cpixel1−Ccheekave

Dh 1=hpixel1−hcheek ave

Where DL, DC and Dh are the normalized L*, C*, and h* values, respectively, of a pixel in the mask region; Lpixel, Cpixel and hpixel are the respective L*, C* and h* values of the pixels as determined from the image analysis; and Lcheekave, Ccheekave and hcheekave are the respective average L*, C* and h* values determined for the cheek.

Biopsy Method.

The biopsy method provides a suitable means for collecting, processing, storing and staining skin tissue samples. The biopsy also provides a suitable means for analyzing the skin samples for histological features associated with the different types of periorbital dyschromia. It is to be appreciated that certain portions of the method may refer to particular tools, equipment, or materials and the use thereof, but, unless indicated otherwise, one of ordinary skill in the art will recognize that equivalent tools, equipments and/or materials and the uses thereof may also be employed without departing from the scope of this method.

Sample Collection.

Skin tissue samples herein may be collected by means of a biopsy, which involves the physical removal of skin tissue from a subject. Biopsy samples collected for use herein may be removed according to any safe and aseptic biopsy method known in the art. For example, the biopsy samples may be collected from a living subject by a physician using conventional, aseptic techniques, and then flash frozen in liquid nitrogen and stored at −80° C. Eyelid biopsy sample collection involves the removal of skin tissue (down to the fatty layer) with, for example, a small elliptical surgical snip (e.g., Westcott™ brand scissors or equivalent). In at least some subjects, the elliptical shape of the incision allows for improved healing in the eyelid areas. Biopsy samples from other areas of skin on the body (e.g., cheek, forehead, arm or leg) may be obtained using, for example, a 2 mm sterile punch biopsy instrument. The size of the resulting punch biopsy sample is typically 2.0 mm in diameter and between 0.25 mm to 1.5 cm thick. In some instances, it may be desirable to suture the biopsy site.

Sample Storage

Biopsy samples should be frozen as soon as possible to minimize sample degradation Thus, it may be desirable to embed the biopsy samples in optimum cutting temperature (“OCT”) tissue freezing medium (e.g., Tissue-tek® brand OCT tissue freezing medium available from Sakura Finetek, Calif.) within 5 minutes of biopsy collection and store the samples in a suitable freezer at a temperature of −80° C. or less.

Sample Sectioning.

Frozen biopsy samples may be sectioned using a Microm HM500 brand cryostat or equivalent. The cryostat should include a microtome capable of producing multiple slices of sectioned tissue sample ranging from 5 to 300 μm in thickness. For example, 14 μm thick sectioned tissue samples are suitable for use herein. Sectioned tissue samples may be placed on slides or other support medium suitable for further analysis (e.g., viewing under a light microscope).

Sample Staining.

Hematoxylin and Eosin stain are commonly used in pathology to get an overall assessment of the tissue and determine if structural abnormalities are present. Commercially available kits such as the Shandon Rapid Chrome Frozen Section Kit available from Thermo Scientific may be used according to the manufacturer's protocol for H&E staining of the sectioned tissue samples. Other staining techniques suitable for identifying histological features in a skin tissue sample (e.g., commercially available Fontana-Masson staining kits) may also be used herein in accordance with a manufacturer's protocol and/or another suitable method known in the art.

›Definitions · 10 of 10

Tape Stripping Method

This method provides a suitable means of obtaining PTCA and/or other biomarkers from biological samples collected from test subjects. It has been discovered that biological material collected in this way may be correlated to a type of periorbital dyschromia (i.e., Type I, Type II, Type III or No Dyschromia). Samples may be collected by contacting a suitable adhesive-containing substrate (“tape strip”) with a target skin surface such that biological material on and/or in the targeted skin portion adheres to the adhesive. Examples of suitable tape strips for use herein include D-Squame® brand polyacrylate ester adhesive tape (available from CuDerm; Dallas Tex.), Durapor, Sebutape™, and Tegaderm™ brand tape, duct tape (e.g., 333 Duct Tape, Nashua tape products), Scotch® brand tape (3M Scotch 810, St. Paul, Minn.), Diamond™ brand tape (The Sellotape Company; Eindhoven, the Netherlands), Sentega™ (polypropylene tape, Sentega Eiketten BV, Utrecht, The Netherlands).

The tape strips are digested with a suitable quantity and concentration of hydrogen peroxide to obtain PTCA from eumelanin. PTCA and its stable-isotope-labeled internal standard, PTCA- 18 O, are then isolated from the digest by a liquid-liquid extraction procedure. The extracted analyte is subjected to reverse-phase, high-performance liquid chromatographic (“HPLC”) analysis on a Waters Atlantis dC18 (3 μm 2.1×100 mm) or equivalent. Detection and quantitation of the PTCA is by tandem mass spectrometry (MS/MS) operating under multiple reaction monitoring conditions, as described in more detail below. Calibration standards are used to quantitate extracted Quality Control samples and unknown Study Specimens. The nominal range of quantitation is 0.15 to 100 ng of PTCA per sample. The concentration of PTCA is determined in the tape strip extract and then converted into total mass/tape strip by multiplying by the extraction volume. The squame scan total protein content found on the tape strips and extracts is determined and the final results are reported as total mass of analyte (ng or μg) per total weight of protein (μg) per sample. Specimen concentrations are determined by back-calculation using a weighted (1/x2) quadratic regression of a calibration curve generated from spiked matrix standards.

Sample Collection

A suitably sized tape strip (e.g., 14 mm diameter (circular) D-Squame® brand polyacrylate ester adhesive tape) is placed on a clean area of the target skin surface (e.g., periorbital region and/or cheek) and adequate pressure is applied to obtain the sample but not cause discomfort to the subject. The tape strip sample is then stored in a suitable storage container (e.g., storage tray or tube) until subjected to the digestion process.

PTCA Analysis

The tape strip sample is carefully removed from the storage container using tweezers. The tape strip sample is curled such that the adhesive-side faces inward and the non-adhesive side faces outward to reduce the possibility of contaminating the skin sample contained on the adhesive side of the tape. The curled tape strip sample is placed as deeply as possible into a 2 mL-polypropylene analysis tube in preparation for extraction of the biological material. The tape strip sample may be transferred to the analysis tube on the day of extraction or samples may be placed on storage plates and transferred to the 2 mL analysis tubes prior to extraction.

The tape strip sample is transferred from the 2 mL analysis tube to a 4 mL cryogenic Nalgene tube. A matrix blank is also prepared. The blank acts as a control and undergoes the sample process as the samples, but does not include a tape strip sample. 0.900 mL of 2 M ammonium hydroxide and 0.900 mL of 6% hydrogen peroxide are added to each of the Nalgene tubes, capped and vortexed. The tubes are placed on a rocker to incubate for three hours at 200 Mot/minute. The tubes are removed from the rocker and carefully uncapped to release any pressure that may build up during incubation. The liquid contents of each 4 mL Nalgene tube are transferred to separate 15 mL conical tubes. The tape strip is discarded and not transferred to the 15 mL conical tube. 32 μL of 10% sodium bisulfite is added to each 15 mL conical tube, capped and vortexed. Add 50 μL internal standard solution, cap and vortex. Internal standard solution is prepared as follows:

Using the appropriate Internal Standard Reference Standard (i.e., stable, isotope-labeled PTCA 18 O) weigh approximately 5 mg of Internal Standard into a glass scintillation vial and record the weight to at least the nearest 0.01 mg. Add of the exact amount of 10 mM ammonium acetate solution to give exactly a 1.00 mg/mL solution of the compound according to the following equation:

Purity=Decimal % purity assigned to the Analytical Reference Standard; and SCF=salt correction factor.

Cap with a polytetraflouroethylene-lined cap and mix thoroughly and sonicate to dissolve the compound. Store the resulting solutions at −70 C.

2.00 mL of methyl-tert-butyl ether, 1.00 mL of 37% HCL, and 1.00 mL of saturated ammonium sulfate are added to each tube. The tubes are capped and vortexed. Centrifuge the samples at 3,000 RPM for 15 minutes and then transfer 1.00 mL of the organic layer of each tube to separate liquid chromatography vials. Dry the vials down under nitrogen as is known in the art. Reconstitute the vials with 0.250 mL of ammonium acetate, cap and vortex. Analyze the samples by high-performance liquid chromatography (HPLC)/mass spectrometry (MS)/mass spectrometry (MS).

EXAMPLES
›Examples6
›Example 1

This example illustrates how different types of periorbital dyschromia can be distinguished using the Visual Classification Method. The Munsell Book of Color, Matte Collection (Munsell Color, Inc.) nomenclature is used to describe the color appearance of the different types of periorbital dyschromia or the lack thereof. The basal skin tone in this example refers to overall tone of the skin on the cheek.

1. No Dyschromia: occurs when there is no discoloration present in the periorbital region, discoloration is present but the intensity is very low (“non-severe”), or the discoloration does not extend beyond the inner corner of the eye (e.g., into Zone 1 ).

2. Type 1 Periorbital Dyschromia: occurs when Zone 1 , Zone 2 and Zone 3 of the periorbital skin region are affected with a “tanned-like” skin tone. The tanned-like appearance found on Type I periorbital dyschromia may result from a darkening of the periorbital skin and an increase of the chroma relative to the basal skin tone. In this scenario, the hue in the periorbital skin is similar to basal skin hue. The Munsell Book of Color, Matte Collection (Munsell Color, Inc.) nomenclature can be used to describe this visual classification. For example, a Caucasian female (i.e., Fitzpatrick skin type I to III) who has basal skin tone of 10R 7/4 according to the Munsell Color nomenclature (H V/C—which corresponds to “hue”, “value” (i.e., darkness) and “chroma” respectively), will be classified as Type 1 when the periorbital skin V value is 6 or lower and C value is 5 or higher (e.g., 10R 6/5 10R6/6, 10R 5/5, 10R 5/6). In another example, a Caucasian female with basal skin tone 10R 7/4 will be classified as Type I when the periorbital skin value 2.5YR 5/5 or 2.5YR 5/6.

3. Type II Periorbital Dyschromia: occurs when Zone 1 of the periorbital skin is affected with a “bruised-liked” tone relative to the basal skin. Bruised appearance of the periorbital skin can be a result of a darkening of the skin accompanied by a decrease in chroma relative to the basal skin tone. In this case, the periorbital skin hue may be similar to basal skin hue. For example, using the Munsell Matte Color collection, a Caucasian female with a basal skin tone of 10R 7/4 may manifest a bruised appearance characteristic of Type II periorbital dyschromia when the V value for Zone I and/or II drops to 6 or below and the chroma value drops to 4 or below (e.g., 10R 6/3, 10R6/2, 10R 5/3, 10R 5/2). The bruised appearance characteristic of Type II periorbital dyschromia can also result when the periorbital skin gets darker, chroma decreases and red hues are present. A Caucasian female with a basal skin tone of 10R 7/4 will manifest bruised appearance of Type II periorbital dyschromia when the periorbital skin hue is 7.5R, V is less than 7 and Chroma is less than 4 (e.g., 7.5R 6/2, 7.5R 5/2 7.5R 6/3, or 7.5R5/3).

4. Type III Periorbital Dyschromia: may occur when elements of both Type I and Type II periorbital dyschromia are present. Type III is typically observed in Zone I and Zone 2 of the periorbital region, and may a display “bruised-like” and “tanned-like” appearance. The “bruised-like” and “tanned-like” appearances may be observed in the same or different periorbital Zones simultaneously. For example, a Caucasian female may exhibit Type III periorbital dyschromia when Zone I displays a bruised appearance and Zone II displays tanned appearance. Type III periorbital dyschromia can also occur when bruised and tanned appearance occur simultaneously in Zone I and Type III can also occur when Zone 1 and/or Zone 2 of the periorbital region are affected with “bruised-like” and “tanned like” appearance and Zone 3 is effected by either “bruised-like” or “tanned-like” appearance. Type III can also occur when there is a darkening in the periorbital skin when compared to basal skin such as the cheek with no change in chroma value. For a Caucasian female with basal skin tone 10R 7/4, Type III periorbital dyschromia may occur from a darkening in the skin with no change in chroma, can be represented, for example, by 10R 6/4, 7.5R 6/4.

›Example 2

This example illustrates the distinctions between Type I, Type II and Type III periorbital dyschromia using imaging methods. Using the methods described herein, images were obtained from test subjects identified as having Type I, Type II, or Type III periorbital dyschromia, and the RGB values and B/G ratios from each of zones 1 , 2 and 4 were determined for each subject. Zone 4 refers to the combination of Zones 1 and 2 . The zones were masked as described in the imaging analysis method above. Zone 4 was masked as illustrated in FIG. 16 . Side-by-side plots of the various RGB values and B/G ratios are illustrated in FIGS. 19 to 30 . The percentile shown on the y-axis of the charts in FIGS. 19 to 30 represents the percentile ranking of each individual in the distribution. The data point at the 50 th percentile represents the median of the data set (i.e., the individual who was in the middle of the rank ordered population). The X-axis shows the average imaging value for the region analyzed. As can be seen in FIGS. 19-30 , those individuals who fall generally in the middle of the population distribution (e.g., between the 25 th and 75 th percentile; the 33 rd and 67 th percentile; or the 40 th and 60 th percentile) exhibit color imaging values that can be used to distinguish the different types of periorbital dyschromia from one another.

FIGS. 19-30 are side-by-side comparisons of graphical plots representing imaging values corresponding to Type I, Type II and Type III test subjects. FIG. 19 shows a side-by-side comparison of Zone 1 R values. FIG. 20 shows a side-by-side comparison of the Zone 1 B values. FIG. 21 shows a side-by-side comparison of the Zone 1 G values. FIG. 22 shows a side-by-side comparison of the Zone 1 B/G ratios. FIG. 23 shows a side-by-side comparison of the Zone 2 R values. FIG. 24 shows a side-by-side comparison of the Zone 2 G values. FIG. 25 shows a side-by-side comparison of the Zone 2 B values. FIG. 26 shows a side-by-side comparison of the Zone 2 B/G ratios. FIG. 27 shows a side-by-side comparison of the R values from Zone 4 . FIG. 28 shows a side-by-side comparison of the B values from Zone 4 . FIG. 29 shows a side-by-side comparison of the plots of the G values from Zone 4 . FIG. 30 shows a side-by-side comparison of the plots of the B/G ratios from Zone 4 .

Because skin is complex, there can be many different colors in a particular region of interest. Different people may appear to have some or all of the same colors present in particular area of skin, but the colors may be present at different percentages. And it is the distribution and/or preponderance of the different colors in the region of interest that drives how periorbital dyschromia is perceived. Thus, the images described in this Example were also analyzed on a pixel by pixel basis to determine if differences between different types of periorbital dyschromia could be observed. The RGB values for each pixel were converted to LabCh values as described in the imaging method above, and the L, C and h values were normalized to the cheek basal skin tone. The DL, Dc and Dh values of each pixel are classified as follows:

DL>−5: the pixel is not meaningfully darker than the nearby cheek skin (or it could even be lighter), these pixels were classified as No Dyschromia

DL<−5 and DC>2: the pixel is both darker and more chromatic than the nearby skin. These pixels are classified as Type I.

DL<−5 and DC<2: the pixel is darker, but without a meaningful increase in chroma. These pixels are classified as Type II periorbital dyschromia.

After each pixel was classified, the distribution of the pixels in the masked region was determined by counting the number of pixels classified as each type of periorbital dyschromia (i.e., No Dyschromia, Type I and Type II) and dividing by the total number pixels in each mask to obtain percentages, (e.g., % Type I=# pixels classified as Type I divided by Total # pixels) Table 1 illustrates how the different types of periorbital dyschromia may be classified based on the observations from the pixel by pixel analysis of the images.

›Example 3

This example further illustrates how imaging values can be used to distinguish Type I, Type II and Type III periorbital dyschromia. Using the methods described herein, images were obtained from test subjects identified as having Type I, Type II, or Type III periorbital dyschromia, and the color corrected imaging values for each of Mask A, Mask B and Mask C were determined for each image. Table 5 shows the resulting values.

This example illustrates the histological differences between No Dyschromia, Type I, Type II and Type III periorbital dyschromia. Biopsy samples were collected from upper eyelid, lower eyelid and the area of the face near the temple of fifty-five test subjects. The biopsy samples were collected, stored, sectioned and stained with H&E stain according to the Biopsy method above. An analysis of the sectioned and stained samples revealed the presence of deposits disposed around the nuclei of cells clustered together in the dermal region of the tissue sample. The deposits appeared brown in a color micrograph, and it is believed that the deposits are melanin. The samples were stained with Fontana-Masson stain and turned black (i.e., “Fontana-Masson positive deposits”), which indicates that the deposits may be melanin.

Thirty biopsy samples representative of the four different classifications were selected at random for further analysis ( 6 non-dyschromia samples, 9 Type I sample, 9 Type II samples, and 6 Type III samples). The thirty samples were analyzed at 20× magnification under an Olympus® Model BX51TRF brand light microscope. For the analysis, a minimum of two tissue sections and 8 fields of view (“FOV”), which is defined as the area of tissue that can be observed under 20× magnification, are analyzed per subject. The analysis revealed that Type I and Type III periorbital dyschromia exhibited higher amounts of the Fontana-Masson positive deposits on the dermis than Type II and those subjects identified as not having severe periorbital dyschromia. The average number of Fontana-Masson positive deposits per field of view is provided in Table 2 below. FIG. 12 graphically depicts the results illustrated in Table 2.

As can be seen in Table 8 and FIG. 12 , the Fontana-Masson positive deposits distinguish the different types of periorbital dyschromia from each other and from the control. The chart in FIG. 12 illustrates this distinction based on the difference in the average number of Fontana-Masson positive deposits observed per FOV under 20× magnification.

›Example 4 · 1 of 3

This example illustrates the differences in gene expression between No Dyschromia, Type I, Type II and Type III periorbital dyschromia. In this example, gene expression profiles and phenotype themes were determined from biopsy samples of female test subjects aged 18 to 45 who were classified as exhibiting Type I, Type II or Type III periorbital dyschromia by an expert grader. Thirteen subjects were classified as Type I periorbital dyschromia, fourteen subjects were classified as Type II periorbital dyschromia, seven subjects were classified as Type III periorbital dyschromia, and 8 test subjects were classified as No Dyschromia. The biopsy samples were collected, stored and sectioned according to the Biopsy method described above. The epidermis and dermis layers of the section biopsy samples were separated with a PALM Microbeam IV™ brand Laser-capture Micro dissection (“LCM”) system (available from Carl Zeiss MicroImaging GmbH, Germany) in accordance with the manufacturer's instructions.

After separating the epidermal and dermal layers of the sectioned biopsy samples, each layer was subjected to RNA extraction. In this example, RNA was extracted from each of the epidermis and dermis layers by utilizing the Arcturs picopure kit according to the manufacturer's instructions. RNA quantification and quality assurance was performed using Agilence 2100 bioanalyzer. Of course it is to be appreciated that any suitable means of extracting RNA from a tissue sample known in the art may be used. The extracted RNA was then run on a GeneTitan U129 brand microarray to identify how certain genes were expressed in each sample. A statistical analysis of the microarray data was performed to derive the gene expression signatures. A general description of the statistical analysis is provided below. It is to be appreciated that while the statistical analysis below provides a suitable means of generating a gene signature from the microarray data, other statistical methods known in the art may also be suitable for use herein.

Filtering based on Present Calls

Filtering creates a list of potential genes for inclusion in the gene expression signature. For example, as a first filter step, at least 50% of the samples in one treatment group must have a “Present call” for each probe set. Present calls are derived from processing the raw microarray data and provide evidence that the gene transcript complementary to a probe set is actually expressed in the biological sample. The probes that are absent from all samples are likely to be just noisy measurements. It is important to filter out probe sets that do not contribute meaningful data to the signature. For all gene expression signatures in this example, the data was filtered for probe sets with at least 10% Present calls provided by the Affymetrix MAS 5 software.

Filtering According to a Statistical Measure

As a second filtering step, it may be desirable to use a suitable statistical measure such as, for example, p-values from a t-test, ANOVA, correlation coefficient, or other suitable model-based analysis. Limiting the gene signature list to genes that meet some reasonable cutoff (e.g., p ≤0.05, 0.01, 0.001, or even ≤0.0001 or less) for statistical significance compared to an appropriate control is important to allow selection of genes that are characteristic of the biological state of interest. This is preferable to using a fold change value, which does not take into account the noise around the measurements. For example, p-values may be chosen as the statistical measure and a cutoff value of p≤0.05 may be chosen. The t-statistic was used in this example to select the probe sets in the signatures because it provides an indication of the directionality of the gene expression changes (i.e. up- or down-regulated) as well as statistical significance.

Sorting the Probe Sets

All the probe sets are sorted into sets of up-regulated and down-regulated sets using the statistical measure. In this example, a t-test was used to compute p-values, the values (positive and negative) of the t-statistic are used to sort the list since p-values are always positive. The sorted t-statistics will place the sets with the most significant p-values at the top and bottom of the list with the less-significant p-values being placed towards the middle.

Creation of the Gene Expression Signature

Using the filtered and sorted list created, a suitable number of probe sets from the top and bottom are selected to create a gene expression signature that preferably has approximately the same number of sets chosen from the top as chosen from the bottom. For example, the gene expression signature created may have at least 10, 50, 100, 200, or 300 and/or less than 800, 600, or about 400 genes corresponding to a probe set on the chip. The number of probe sets approximately corresponds to the number of genes, but a single gene may be represented by more than one probe set. It is understood that the phrase “number of genes” as used herein, corresponds generally with the phrase “number of probe sets.”

U.S. Publication No. 2012/0283112 titled “Systems and Methods For Identifying Cosmetic Agents For Skin Care Compositions” filed by Binder, et al., on Feb. 22, 2012 and U.S. Publication No. 2013/0261007 titled “Systems, Models and Methods for Identifying and Evaluating Skin-Active Agents Effective for Treating Conditions and Disorders of Skin Pigmentation,” filed by Hakozaki, et al., on Mar. 27, 2012 disclose suitable nonlimiting examples of methods of generating a gene expression profile.

Tables 9 through 20 below show gene expression signatures associated with Type I, Type II or Type III periorbital dyschromia, as compared to the gene expression signature for No Dyschromia. The gene expression data was obtained by extracting RNA from lower eyelid biopsy samples obtained according to the biopsy method. Only genes that showed up-regulation or down-regulation with a p-value of 0.05 or less and fold change of 1.1 or more are shown. Table 9 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type I periorbital dyschromia. Table 10 shows the top 100 down-regulated genes expressed in the epidermis of subjects identified as having Type I periorbital dyschromia. Table 11 shows the top 100 up-regulated genes expressed in the dermis of subjects identified as having Type I periorbital dyschromia. Table 12 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type I periorbital dyschromia. Table 13 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type II periorbital dyschromia. Table 14 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 15 shows the top 71 up-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 16 shows the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type II periorbital dyschromia. Table 17 shows the top 100 up-regulated genes expressed in the epidermis of subjects identified as having Type III periorbital dyschromia. Table 18 shows the top 100 down-regulated genes expressed in the epidermis of subjects identified as having Type III periorbital dyschromia. Table 19 shows the top 100 up-regulated genes expressed in the dermis of subjects identified as having Type III periorbital dyschromia. Table 20 show the top 100 down-regulated genes expressed in the dermis of subjects identified as having Type III periorbital dyschromia.

›Example 4 · 2 of 3

The gene expression signatures provided in Table 9-20 can be used to classify the type of periorbital dyschromia exhibited by person. For example, a person can be classified as exhibiting Type I periorbital dyschromia when the gene expression signature of a skin tissue sample obtained from the periorbital region of the person corresponds to 15% or more (e.g., more than 25%, 50%, 75%, 80%, 90% or even up to 100%) of the genes from Tables 9 to 12. In other words, a person can be classified as exhibiting Type I periorbital dyschromia if the top 100 upregulated genes in the epidermis comprise 15% or more the genes in Table 9; the top 100 downregulated genes in the epidermis comprise 15% or more of the genes in Table 10; the top 100 upregulated genes in the dermis comprise 15% or more of the genes in Table 11; and/or the top 100 downregulated genes in the dermis comprise 15% or more of the genes in Table 12. Similarly, a person can be classified as exhibiting Type II or Type III periorbital dyschromia when the gene expression signature of the skin tissue sample comprises significantly upregulated and downregulated genes that correspond to 15% or more of the genes in at least one of Tables 13 to 16 or Tables 17 to 20, respectively.

Theme analysis may be used to identify biological or phenotypic themes associated with the gene expression data that correspond to Type I, Type II and Type III periorbital dyschromia. Theme analysis is a statistical analysis-based method for detecting biological patterns in gene expression data. The method uses an ontology of controlled vocabulary terms developed by the Gene Ontology (“GO”) Consortium [Ashburner, M. et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet, 25, 25-29] that describe the biological processes, molecular functions and cellular components associated with gene products. Analysis involves statistical comparison of a regulated list of genes and a larger reference list of all the expressed genes, to determine if genes annotated to specific GO terms are significantly enriched in the regulated list. This analysis may reveal biological patterns when multiple genes associated with a given GO term occur on the regulated list at a frequency greater than expected by chance. Such analysis may be performed using Theme Extractor proprietary software and an algorithm that calculates the p-value of each ontology term. Data may be analyzed for statistical significance, for example, by the Fisher's exact test. Conventional approaches and statistical methods such as, for example, Gene Set Enrichment Analysis described by Subramanian, A., et al., in “Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles,” Proc. Natl. Acad Sci U.S.A, 102, 15545-155501 (2005) are suitable for conducting theme analysis herein.

Table 21 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type I periorbital dyschromia. The results in Table 21 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 13 and 14. Only the most highly significant themes are shown (p-value≤1×10 −2 to p≥1×10 −5 ) and the theme analysis was done separately for the up- and down-regulated genes. The level of indentation in the terms column (i.e., the number of dots preceding the term) generally indicates the level in the GO hierarchy and parent/child relationships between terms.

Table 21 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type II periorbital dyschromia. The results in Table 14 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 13 and 14. Only the most highly significant themes are shown (p≤1×10 −2 ), and the theme analysis was done separately for the up- and down-regulated genes.

Table 23 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type III periorbital dyschromia. The results in Table 23 were generated differentially expressed genes in those subjects with top ranked genes shown in Tables 17 and 18. Only the most highly significant themes are shown (p-value <1×10 −2 ), and the theme analysis was done separately for the up- and down-regulated genes.

Table 24 shows Gene Ontology Biological Process terms that are significantly enriched in the dermis of subjects with Type I periorbital dyschromia. The results in Table 24 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 11 and 12. Only the most highly significant themes are shown (p≤1×10 −2 ), and the theme analysis was done separately for the up- and down-regulated genes.

Table 25 shows Gene Ontology Biological Process terms that are significantly enriched in the dermis of subjects with Type II periorbital dyschromia. The results in Table 25 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 15 and 16. Only the most highly significant themes are shown (p<1×10 −2 ), and the theme analysis was done separately for the up- and down-regulated genes.

Table 26 shows Gene Ontology Biological Process terms that are significantly enriched in the epidermis of subjects with Type III periorbital dyschromia. The results in Table 26 were generated from differentially expressed genes in those subjects with top ranked genes shown in Tables 19 and 20. Only the most highly significant themes are shown (p≤1×10 −2 ), and the theme analysis was done separately for the up- and down-regulated genes.

The theme analysis of Type I periorbital dyschromia may be broadly correlated to cellular physiological responses associated with cell stress and cell communication in the epidermis and metabolism, stress and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type I periorbital dyschromia revealed, generally, an increase in gene expression associated with calcium ion trans-membrane transport, chromatin modification and cell communication and a decrease in gene expression associated with immune response and toll-like receptor pathway. Dermal gene expression revealed the following general themes: an increase in gene expression associated with response to estrogen stimulus, regulation of body fluid levels, regulation of cell migration, hypoxic stress, oxidative damage, response to wounding, blood vessel development, extracellular matrix organization, cytoskeleton organization, cell junction organization, neuron development and muscle structure development and a decrease in gene expression associated with cholesterol synthesis, regulation of glucose transport and protein transport.

›Example 4 · 3 of 3

The theme analysis of Type II periorbital dyschromia appears to show a general correlation with the cellular physiological responses associated with metabolism and energy production, cell stress and cell communication in the epidermis and metabolism and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type II periorbital dyschromia revealed, generally, an increase in gene expression associated with chromatin modification and a decrease in gene expression associated with glycolysis, ATP synthesis, cell cycle, TCA cycle, response to pH, antigen presentation and processing. Dermal gene expression revealed the following general themes: an increase in gene expression associated with transmission of nerve impulses and neuron development and a decrease in gene expression associated with cholesterol synthesis.

Theme analysis of Type III periorbital dyschromia may be broadly correlated to cellular physiological responses associated with metabolism in the epidermis and metabolism and nutrition, stress and cell communication, and structure in the dermis. In particular, a theme analysis of epidermal gene expression related to Type III periorbital dyschromia revealed, generally, a decrease in gene expression associated with oxidation and reduction process. A theme analysis of dermal gene expression revealed the following general themes: an increase in gene expression associated with ion and metal transport, regulation of the MAPK signaling cascade, regulation of Jun Kinase activity, blood vessels and neuron development and a decrease in gene expression associated with cholesterol synthesis, fatty acid metabolic process, microtubule cytoskeleton organization, organelle assembly, and carbohydrate metabolic process.

Products for treating different types of periorbital dyschromia are described in U.S. Provisional Application No. 61/798,278, filed by Osorio, et al., on Mar. 15, 2013 and titled “Array of Products.” Methods of treating different types of periorbital dyschromia are described in U.S. Provisional App. No. 61/798,340, filed by Osorio et al., on Mar. 15, 2013 and titled “Methods of Treating Periorbital Dyschromia.”

The dimensions and values disclosed herein are not to be understood as being strictly limited to the exact numerical values recited. Instead, unless otherwise specified, each such dimension is intended to mean both the recited value and a functionally equivalent range surrounding that value. For example, a dimension disclosed as “40 mm” is intended to mean “about 40 mm” Additionally, properties described herein may include one or more ranges of values. It is to be understood that these ranges include every value within the range, even though the individual values in the range may not be expressly disclosed.

All documents cited in the Detailed Description of the Invention are, in relevant part, incorporated herein by reference; the citation of any document is not to be construed as an admission that it is prior art with respect to the present invention. To the extent that any meaning or definition of a term in this document conflicts with any meaning or definition of the same term in a document incorporated by reference, the meaning or definition assigned to that term in this document shall govern.

While particular embodiments of the present invention have been illustrated and described, it would be obvious to those skilled in the art that various other changes and modifications can be made without departing from the spirit and scope of the invention. It is therefore intended to cover in the appended claims all such changes and modifications that are within the scope of this invention.

›Tables in the description — 25
TABLE 1 — Type I
Imaging ValueMask AMask BMask C
R118-166135-187128-178
G83-11994-13689-129
B76-10881-11279-112
B/G0.75-0.920.73-0.860.74-0.89
L48-5443-6141-59
A13-189-1712-18
b9-2314-2512-23
Hue (h)35-5342-6039-56
Chroma (C)16-2817-2817-28
TABLE 2 — Type II
Imaging ValueMask AMask BMask C
R148-176165-201159-186
G102-135128-160115-148
B96-128108-145103-136
B/G0.86-0.980.82-0.930.84-0.94
L48-6057-6952-64
a11-209-1910-19
b7-1610-209-17
Hue (h)24-5433-6132-57
Chroma (C)15-2315-2215-22
TABLE 4 — Subject
Pixel DistributionClassified as:
>36.4% classified as Type IType I
<9.6% classified as Type I; ANDType II
>21.2% classified as Type II
>9.6% but less than 36.4%Type III
classified as Type I; AND >20%
classified as Type II.
<9.6% classified as Type I ANDNo
<21.2% classified as Type II.Dyschromia
TABLE 5 — Type I
Imaging ValueMask AMask BMask C
R153167161
G108123116
B9510198
B/G0.870.820.84
L505553
a*161415
b*151917
Hue (h)435349
Chroma (C)222323
TABLE 6 — Type II
Imaging ValueMask AMask BMask C
R161176169
G119135128
B108116112
B/G0.910.860.88
L546057
a*151314
b*121715
Hue (h)395246
Chroma (C)202120
TABLE 7 — Type III
Imaging ValueMask AMask BMask C
R157176167
G113133124
B101111107
B/G0.890.840.86
L525956
a*161314
b*141816
Hue (h)415448
Chroma (C)212322
TABLE 8 — No
DyschromiaType IType IIType III
Subject 12.8815.000.8713.6
Subject 24.6711.500.104.19
Subject 31.6922.450.002.35
Subject 41.9412.964.003.81
Subject 52.5811.500.386.33
Subject 62.336.950.5614.25
Subject 710.580.07
Subject 812.330.00
Subject 921.780.50
Average2.6813.890.757.42
STD DEV0.431.490.452.12
TABLE 9 — Type I Epidermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11719428_a_atBTBD7BTB (POZ) domain containing 7AI5801620.000259
11724297_a_atBMP7bone morphogenetic protein 7NM_001719.20.000396
11715192_s_atC7orf46chromosome 7 open reading frame 46g1882196210.000446
11724759_s_atCALM1calmodulin 1 (phosphorylase kinase,NM_006888.30.000486
delta)
11735610_a_atRPS6KA5ribosomal protein S6 kinase, 90 kDa,AF074393.10.000746
polypeptide 5
11758022_s_atTNNI2troponin I type 2 (skeletal, fast)AA7288280.00151
11721260_a_atWDR47WD repeat domain 47NM_001142550.10.001528
11727979_a_atMAN2B2mannosidase, alpha, class 2B,BC094773.10.002024
member 2
11753967_a_atSLC6A2solute carrier family 6AK301811.10.002393
(neurotransmitter transporter,
noradrenalin), member 2
11722090_a_atEFNA4ephrin-A4NM_005227.20.002687
11758092_s_atEFNA5ephrin-A5BE4647990.002776
11717146_atPTPN1protein tyrosine phosphatase, non-NM_002827.20.002876
receptor type 1
11716283_atPAPD7PAP associated domain containing 7NM_006999.30.003497
11746140_a_atARHGEF26Rho guanine nucleotide exchangeAF415176.10.003751
factor (GEF) 26
11724038_a_atPTGS2prostaglandin-endoperoxideBC013734.10.003867
synthase 2 (prostaglandin G/H
synthase and cyclooxygenase)
11723156_a_atLSP1lymphocyte-specific protein 1NM_001013254.10.004011
11729840_s_atZCCHC2zinc finger, CCHC domain containing 2NM_017742.40.004086
11754302_a_atATP2A2ATPase, Ca++ transporting, cardiacBM6768990.004156
muscle, slow twitch 2
11754447_a_atRPS6KA5ribosomal protein S6 kinase, 90 kDa,BM9688290.00436
polypeptide 5
11739724_a_atATP2B2ATPase, Ca++ transporting, plasmaAL1382830.004438
membrane 2
11723075_a_atBCL9LB-cell CLL/lymphoma 9-likeAY296059.10.00493
11717385_a_atMT1Gmetallothionein 1GNM_005950.10.005447
11758557_s_atZFP36L1zinc finger protein 36, C3H type-like 1AI7585050.005544
11724628_a_atMAT1Amethionine adenosyltransferase I,NM_000429.20.005576
alpha
11744955_a_atANXA1annexin A1AK296808.10.005629
11718966_atNUFIP2nuclear fragile X mental retardationBU5337670.006124
protein interacting protein 2
11744953_a_atANXA1annexin A1BC034157.10.007553
11717387_x_atMT1Gmetallothionein 1GNM_005950.10.007682
11727642_a_atTRERF1transcriptional regulating factor 1AF111801.10.0078
11745806_a_atAMMECR1LAMME chromosomal region gene 1-likeAK095871.10.008163
11717514_a_atANXA1annexin A1NM_000700.10.008725
11744954_x_atANXA1annexin A1BC034157.10.009223
11743864_a_atATP2B1ATPase, Ca++ transporting, plasmaS49852.10.009249
membrane 1
11717927_atFOXK2forkhead box K2NM_004514.30.009268
11717386_s_atMT1Gmetallothionein 1GNM_005950.10.009421
11730080_x_atIL28RAinterleukin 28 receptor, alphaNM_170743.20.009429
(interferon, lambda receptor)
11763297_x_atCCDC76coiled-coil domain containing 76BQ6143350.010042
11726119_atRPGRretinitis pigmentosa GTPase regulatorAK291832.10.01012
11739805_a_atRASAL2RAS protein activator like 2AK075169.10.010243
11715190_s_atC7orf46chromosome 7 open reading frame 46g1882196170.010448
11726351_atEFNA5ephrin-A5CB2409290.010459
11738035_s_atRTN4reticulon 4AK302741.10.010618
11724104_s_atSGK3serum/glucocorticoid regulatedNM_001033578.10.010735
kinase family, member 3
11729396_a_atNEK1NIMA (never in mitosis gene a)-Z25431.10.010781
related kinase 1
11723592_atLRRC8Cleucine rich repeat containing 8NM_032270.40.011015
family, member C
11757982_s_atKIF21Akinesin family member 21AN394070.011191
11731899_s_atPPATphosphoribosyl pyrophosphateD13757.10.01137
amidotransferase
11726633_s_atTRIM8tripartite motif-containing 8BC021925.10.011932
11725675_a_atRORARAR-related orphan receptor AAA0340120.012081
11745021_a_atMYCv-myc myelocytomatosis viralK02276.10.012276
oncogene homolog (avian)
11758246_s_atARL4DADP-ribosylation factor-like 4DBM7195290.012438
11726634_a_atMYST3MYST histone acetyltransferaseNM_001099412.10.012468
(monocytic leukemia) 3
11735421_a_atNKD2naked cuticle homolog 2AF358137.10.013343
( Drosophila )
11723821_a_atSMURF2SMAD specific E3 ubiquitin proteinAY014180.10.013348
ligase 2
11733165_s_atYIPF5Yip1 domain family, member 5NM_001024947.20.013814
11723169_s_atFOXN2forkhead box N2NM_002158.30.014398
11728958_x_atE2F8E2F transcription factor 8NM_024680.20.014717
11762525_s_atAF339086.10.015079
11731645_a_atCAMKK2calcium/calmodulin-dependentBC026060.20.016269
protein kinase kinase 2, beta
11730893_a_atUBA6ubiquitin-like modifier activatingEF623993.10.016784
enzyme 6
11730360_atCCDC126coiled-coil domain containing 126NM_138771.30.016798
11736426_s_atCLIP4CAP-GLY domain containing linkerBM9946850.017149
protein family, member 4
11725820_s_atPAQR3progestin and adipoQ receptorNM_001040202.10.01721
family member III
11743411_a_atRBM25RNA binding motif protein 25BG2512180.017641
11718873_a_atATP2A2ATPase, Ca++ transporting, cardiacNM_170665.30.018009
muscle, slow twitch 2
11739797_a_atRFX2regulatory factor X, 2 (influencesNM_134433.20.018119
HLA class II expression)
11739408_atMLL3myeloid/lymphoid or mixed-lineageDN9178960.018481
leukemia 3
11734164_a_atARHGEF26Rho guanine nucleotide exchangeNM_015595.30.018897
factor (GEF) 26
11721039_a_atSOLHsmall optic lobes homologNM_005632.20.019352
( Drosophila )
11721053_s_atKLHDC5kelch domain containing 5NM_020782.10.01948
11753735_x_atTMSB4Xthymosin beta 4, X-linkedBC101792.10.019698
11748149_a_atFNBP1formin binding protein 1AK293743.10.019714
11728706_x_atEMP2epithelial membrane protein 2DB3740120.020127
11717989_a_atSUN1Sad1 and UNC84 domain containing 1NM_001130965.10.020293
11722448_atKCNMB4potassium large conductanceAF160967.10.020548
calcium-activated channel,
subfamily M, beta member 4
11727512_atUBN2ubinuclein 2CA7758870.020981
11759962_atTPRKBTP53RK binding proteinAY643713.10.021007
11728603_a_atCLDN23claudin 23NM_194284.20.0211
11743497_atBMP2bone morphogenetic protein 2BX1010900.021788
11718874_s_atATP2A2ATPase, Ca++ transporting, cardiacNM_170665.30.0218
muscle, slow twitch 2
11721216_s_atTMEM106Btransmembrane protein 106BAA7891090.021968
11718006_a_atMYLIPmyosin regulatory light chainBC002860.20.02198
interacting protein
11719104_s_atCPNE3copine IIIBC066597.10.022194
11723130_a_atARHGEF7Rho guanine nucleotide exchangeNM_003899.30.022803
factor (GEF) 7
11757700_a_atNDFIP2Nedd4 family interacting protein 2AA5212510.022979
11718081_a_atATP2B4ATPase, Ca++ transporting, plasmaNM_001001396.10.023666
membrane 4
11748034_a_atCMAHcytidine monophosphate-N-D86324.10.02381
acetylneuraminic acid hydroxylase
(CMP-N-acetylneuraminate
monooxygenase) pseudogene
11740148_x_atZNF429zinc finger protein 429NM_001001415.20.023983
11716408_a_atMETmet proto-oncogene (hepatocyteNM_001127500.10.024171
growth factor receptor)
11720082_atCBX6chromobox homolog 6NM_014292.30.024178
11733076_x_atPPP1R12Aprotein phosphatase 1, regulatoryAK314193.10.024224
(inhibitor) subunit 12A
11743280_a_atWNK1WNK lysine deficient protein kinase 1BC013629.20.024246
11719028_a_atPSD3pleckstrin and Sec7 domainDB3143580.024644
containing 3
11757869_s_atAKAP13A kinase (PRKA) anchor protein 13BE5040330.024753
11722290_a_atZBTB43zinc finger and BTB domainAI7452250.024875
containing 43
11743865_s_atATP2B1ATPase, Ca++ transporting, plasmaAI3373210.025057
membrane 1
11734994_s_atSKIv-ski sarcoma viral oncogeneNM_003036.30.025378
homolog (avian)
11731857_x_atMT1Hmetallothionein 1HNM_005951.20.026268
11758247_x_atARL4DADP-ribosylation factor-like 4DBM7195290.026757
11731787_x_atERC1ELKS/RAB6-interacting/CAST familyNM_178037.10.026811
member 1
TABLE 10 — Type I Epidermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
11763233_x_atTRACT cell receptor alpha constantEU427374.10.000086
11750712_a_atSEMA4Asema domain, immunoglobulinAK296693.10.000205
domain (Ig), transmembrane
domain (TM) and short
cytoplasmic domain,
(semaphorin) 4A
11743350_a_atC15orf48chromosome 15 open readingCA3090870.000277
frame 48
11723817_atARHGAP29Rho GTPase activating protein 29BU6206590.000376
11723854_atSAMD9sterile alpha motif domainNM_017654.20.000398
containing 9
11754862_a_atRARRES2retinoic acid receptorAK092804.10.000534
responder (tazarotene induced) 2
11729515_a_atSLC26A9solute carrier family 26,NM_052934.30.001204
member 9
11748896_s_atCCRL1chemokine (C-C motif)AK304461.10.001209
receptor-like 1
11761960_x_atTRAV20T cell receptor alpha variable 20AY532913.10.001367
11741285_a_atCCRL1chemokine (C-C motif)BC069438.10.00144
receptor-like 1
11754482_a_atPSMB1proteasome (prosome,BQ0064500.001693
macropain) subunit, beta type, 1
11754184_a_atALDH1A3aldehyde dehydrogenase 1BX538027.10.001883
family, member A3
11726829_atTYW1BtRNA-yW synthesizing protein 1NM_001145440.10.001956
homolog B ( S. cerevisiae )
11725368_atLRG1leucine-rich alpha-2-NM_052972.20.001997
glycoprotein 1
11723561_x_atC11orf75chromosome 11 open readingNM_020179.20.002048
frame 75
11734507_s_atMECOMMDS1 and EVI1 complex locusAK292865.10.002142
11716805_s_atPLEKHA2pleckstrin homology domainNM_021623.10.002256
containing, family A
(phosphoinositide binding
specific) member 2
11754057_x_atCRABP2cellular retinoic acid bindingBT019827.10.00239
protein 2
11737108_a_atCCRL1chemokine (C-C motif)NM_178445.10.002438
receptor-like 1
11720080_atNTRK2neurotrophic tyrosine kinase,NM_001007097.10.002467
receptor, type 2
11715767_s_atACAA2acetyl-CoA acyltransferase 2NM_006111.20.002477
11715670_a_atIFITM1interferon inducedNM_003641.30.002619
transmembrane protein 1 (9-27)
11735937_a_atCD48CD48 moleculeNM_001778.20.002662
11746503_a_atEHFets homologous factorAF203977.10.00321
11736806_atGABRA4gamma-aminobutyric acidNM_000809.20.003627
(GABA) A receptor, alpha 4
11720157_atGDAguanine deaminaseAK295716.10.003854
11720132_a_atSPIRE1spire homolog 1 ( Drosophila )BC125206.10.003917
11725832_s_atOTUB2OTU domain, ubiquitinNM_023112.30.004105
aldehyde binding 2
11717763_a_atMGLLmonoglyceride lipaseBC006230.20.004157
11756683_a_atCD1ECD1e moleculeAK311643.10.004158
11728008_x_atFUT3fucosyltransferase 3NM_000149.30.004308
(galactoside 3(4)-L-
fucosyltransferase, Lewis blood
group)
11750244_a_atMGLLmonoglyceride lipaseAK304844.10.004332
11724346_a_atIFIH1interferon induced withNM_022168.20.004365
helicase C domain 1
11750245_x_atMGLLmonoglyceride lipaseAK304844.10.004459
11758377_s_atTLR1toll-like receptor 1BU6233160.004771
11740897_a_atTREX2three prime repair exonuclease 2NM_080701.30.004847
11718077_s_atMAPKAPK3mitogen-activated proteinNM_004635.30.004908
kinase-activated protein kinase 3
11763697_s_atSNHG9small nucleolar RNA host geneAW9588490.004956
9 (non-protein coding)
11719591_s_atGLTPglycolipid transfer proteinNM_016433.30.005188
11715671_x_atIFITM1interferon inducedNM_003641.30.005216
transmembrane protein 1 (9- 27)
11725641_atEFHD2EF-hand domain family,CB2407680.005381
member D2
11727633_atSLC16A10solute carrier family 16,BC066985.10.005429
member 10 (aromatic amino
acid transporter)
11717764_x_atMGLLmonoglyceride lipaseBC006230.20.005967
11750324_a_atGAS7growth arrest-specific 7AK293755.10.006052
11735833_a_atKIAA1199KIAA1199NM_018689.10.006555
11757367_s_atHSPA7heat shock 70 kDa protein 7BM6778740.006575
(HSP70B)
11741263_s_atLTBP1latent transforming growthM34057.10.006584
factor beta binding protein 1
11723235_a_atIFI44Linterferon-induced protein 44-likeAB000115.10.006657
11729692_a_atSERPINB3serpin peptidase inhibitor,EU852041.10.006806
clade B (ovalbumin), member 3
11727385_a_atPCCApropionyl CoA carboxylase,NM_000282.20.006811
alpha polypeptide
11729742_x_atIFI27L2interferon, alpha-inducibleNM_032036.20.006823
protein 27-like 2
11731973_atSCNN1Gsodium channel, nonvoltage-NM_001039.30.00716
gated 1, gamma
11743404_atZMAT2zinc finger, matrin-type 2BM4501580.007256
11736058_s_atC10orf32chromosome 10 open readingNM_001136200.10.007371
frame 32
11715239_x_atIFITM3interferon inducedg1486128410.007374
transmembrane protein 3 (1-8U)
11726154_atCA6carbonic anhydrase VINM_001215.20.007409
11718850_a_atSRPK1SRSF protein kinase 1AK299591.10.007419
11729693_atSERPINB3serpin peptidase inhibitor,EU852041.10.007514
clade B (ovalbumin), member 3
11755950_a_atcoiled-coil domain containing 71AK098658.10.007621
11740349_atRNASE7ribonuclease, RNase A family, 7BC112334.10.007692
11757300_s_atELOVL5ELOVL family member 5,AL5764140.007702
elongation of long chain fatty
acids (FEN1/Elo2, SUR4/Elo3-
like, yeast)
11725310_atCRISP3cysteine-rich secretory protein 3NM_006061.10.007915
11723490_atGCLMglutamate-cysteine ligase,BC041809.10.008288
11757595_x_atCRABP2cellular retinoic acid bindingBU6311890.008352
protein 2
11752101_s_atEIF2S1eukaryotic translation initiationBC002513.20.008373
factor 2, subunit 1 alpha, 35 kDa
11737496_a_atCD200R1CD200 receptor 1NM_170780.20.008378
11749745_a_atSRP68signal recognition particleAK301100.10.008462
68 kDa
11718142_a_atTTC27tetratripeptide repeatNM_017735.30.00876
domain 27
11737432_a_atPAPLiron/zinc purple acidBC136722.10.008796
phosphatase-like-protein
11753762_x_atKLK6kallikrein-related peptidase 6AY457039.10.008902
11725875_atWDR66WD repeat domain 66NM_144668.40.008916
11729694_s_atSERPINB4serpin peptidase inhibitor,EU852041.10.009199
clade B (ovalbumin), member 4
11763184_atIDEinsulin-degrading enzymeBQ0067770.009364
11737743_a_atARSFarylsulfatase FNM_004042.30.009395
11724785_x_atMRPS18Cmitochondrial ribosomalBC005186.10.009553
protein S18C
11723899_a_atDHRS9dehydrgenase/reductase (SDRNM_005771.40.009689
family) member 9
11743805_s_atMRPL42mitochondrial ribosomalDB3792760.009847
protein L42
11758083_s_atHPGDhydroxyprostaglandinAI7437140.009851
dehydrogenase 15-(NAD)
11727995_a_atSPINKSserine peptidase inhibitorDQ149928.10.010277
Kazal type 5
11727208_x_atDDHD1DDHD domain containing 1NM_030637.10.010297
11737431_x_atPAPLiron/zinc purple acidNM_001004318.20.010375
phosphatase-like protein
11720510_a_atAPOBEC3Gapolopoprotein B mRNA editingNM_021822.20.010471
enzyme, catalytic polypeptide-
like 3G
11719503_a_atDHX36DEAH (Asp-Glu-Ala-His) boxNM_020865.20.010702
polypeptide 36
11753152_x_atCFLARCASP8 and FADD-like apoptosisAK297387.10.010705
regulator
11726289_atGRAMD3GRAM domain containing 3BC008590.10.010722
11722661_atNFE2L3nuclear factor (erythroid-NM_004289.60.010893
derived 2)-like 3
11716743_s_atTJP2tight junction protein 2 (zonaNM_004817.20.011228
occludens 2)
11726894_a_atIRAK3interleukin-1 receptor-BG9293470.011364
associated kinase 3
11753202_s_atSERPINB4serpin peptidase inhibitor,AB046400.10.011604
clade B (ovalbumin), member 4
11739292_atEHFets homologous factorNM_012153.30.012013
11748253_a_atSLC5A1solute carrier family 5AK297665.10.01209
(sodium/glucose
cotransporter), member 1
11723953_a_atCLINT1clathrin interactor 1NM_014666.20.01254
11736117_a_atZFAND5zinc finger, AN1-type domain 5AF062346.10.012593
11724795_atZG16Bzymogen granule protein 16NM_145252.20.013029
homolog B (rat)
11717765_a_atMGLLmonoglyceride lipaseNM_007283.50.01317
11744194_a_atABCC3ATP-binding cassette, sub-CB0552480.013406
family C (CFTR/MRP), member 3
11746088_a_atIFI44interferon-induced protein 44DB3500790.013466
11733533_atCYP4F22cytochrome P450, family 4,NM_173483.30.013708
subfamily F, polypeptide 22
11746581_a_atPCCApropionyl CoA carboxylase,AK298318.10.013745
alpha polypeptide
11717981_a_atACP5acid phosphatase 5, tartrateNM_001611.30.014935
resistant
TABLE 11 — Type I Dermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11733167_atLRRN4CLLRRN4 C-terminal likeBC053902.10.000112
11720616_a_atDNM1dynamin 1NM_001005336.10.000113
11758194_s_atDPP4dipeptidyl-peptidase 4AI7687280.000125
11759481_atCOPB1Coatomer protein complex,AU1439640.000148
subunit beta 1
11718627_atTRAK1trafficking protein, kinesinCA4155440.000173
binding 1
11739544_a_atC19orf12chromosome 19 open readingBX3281230.000234
frame 12
11743191_a_atNTMneurotriminAI3432720.000278
11731649_x_atNTMneurotriminAY358331.10.000343
11723111_a_atEMILIN2elastin microfibril interfacer 2NM_032048.20.000384
11719422_s_atABCC1ATP-binding cassette, sub-NM_004996.30.000385
family C (CFTR/MRP),
member 1
11739527_a_atSECTM1secreted and transmembrane 1CR614987.10.000402
11758810_atCOL14A1collagen, type XIV, alpha 1NM_021110.10.000451
11724441_x_atPTGISprostaglandin I2NM_000961.30.000458
(prostacyclin) synthase
11747944_a_atPPFIA2protein tyrosine phosphatase,AK296380.10.000483
receptor type, f polypeptide
(PTPRF), interacting protein
(liprin), alpha 2
11728451_a_atPCOLCE2procollagen C-endopeptidaseNM_013363.20.000493
enhancer 2
11736086_a_atHHIPhedgehog interacting proteinNM_022475.10.000511
11758252_s_atHSD3B7hydroxy-delta-5-steroidCB1152190.000562
dehydrogenase, 3 beta- and
steroid delta-isomerase 7
11756706_a_atDPP4dipeptidyl-peptidase 4AK314798.10.000563
11720690_a_atC2orf18chromosome 2 open readingNM_017877.30.000604
frame 18
11724619_atRSPO3R-spondin 3 homologNM_032784.30.000676
( Xenopus laevis )
11743447_a_atBICD2bicaudal D homolog 2AW4098270.000721
( Drosophila )
11725773_a_atTBC1D24TBC1 domain family, member 24NM_020705.10.000726
11715704_x_atITGA5integrin, alpha 5 (fibronectinNM_002205.20.000766
receptor, alpha polypeptide)
11756007_a_atHHIPhedgehog interacting proteinAK024645.10.000889
11741377_a_atMMP2matrix metallopeptidase 2NM_001127891.10.000928
(gelatinase A, 72 kDa
gelatinase, 72 kDa type IV
collagenase)
11734550_x_atTGFBItransforming growth factor,NM_000358.20.000963
beta-induced, 68 kDa
11730405_atMEX3Bmex-3 homolog B ( C. elegans )BC111545.10.000968
11731648_a_atNTMneurotriminAY358331.10.000985
11740103_a_atMAFGv-maf musculoaponeuroticBX4270580.001077
fibrosarcoma oncogene
homolog G (avian)
11727783_s_atTPM4tropomyosin 4NM_003290.20.001163
11718269_x_atANGPTL2angiopoietin-like 2AY358274.10.001231
11725897_atTUBB1tubulin, beta 1BC033679.10.001234
11717803_a_atNTN4netrin 4NM_021229.30.001243
11754476_x_atDNM1dynamin 1BQ1837160.00125
11746893_a_atMPP1membrane protein,AK304538.10.001254
palmitoylated 1, 55 kDa
11753088_a_atMCTP1multiple C2 domains,AK297325.10.001305
transmembrane 1
11717568_s_atNQ01NAD(P)H dehydrogenase,NM_000903.20.001408
quinone 1
11720051_atSPOCK1sparc/osteonectin, cwcv andNM_004598.30.001423
kazal-like domains
proteoglycan (testican) 1
11757921_s_atCOL14A1collagen, type XIV, alpha 1AI2484600.001424
11725923_s_atASAP2ArfGAP with SH3 domain,NM_001135191.10.001457
ankyrin repeat and PH
domain 2
11723225_a_atCLDN11claudin 11BC013577.10.001495
11754368_a_atFBN1fibrillin 1AB208840.10.001626
11758062_s_atSTK32Bserine/threonine kinase 32BAI4012030.001735
11740358_a_atLILRB5leukocyte immunoglobulin-NM_001081443.10.001775
like receptor, subfamily B
(with TM and ITIM domains),
member 5
11746200_s_atEHD2EH-domain containing 2AK097126.10.001844
11747945_x_atPPFIA2protein tyrosine phosphatase,AK296380.10.002036
receptor type, f polypeptide
(PTPRF), interacting protein
(liprin), alpha 2
11720811_a_atPAMR1peptidase domain containingNM_015430.20.002139
associated with muscle
regeneration 1
11731716_atCCBP2chemokine binding protein 2NM_001296.40.002156
11754706_a_atHHIPhedgehog interacting proteinAK098525.10.002166
11722940_a_atSRGAP2SLIT-ROBO Rho GTPaseNM_001042758.10.00222
activating protein 2
11724848_a_atDIXDC1DIX domain containing 1DB3589540.002285
11718842_a_atC16orf62chromosome 16 open readingBC058845.10.002303
frame 62
11734549_s_atTGFBItransforming growth factor,NM_000358.20.002382
beta-induced, 68 kDa
11734548_a_atTGFBItransforming growth factor,NM_000358.20.002425
beta-induced, 68 kDa
11731650_a_atNTMneurotriminNM_001048209.10.002477
11738845_x_atNTMneurotriminNM_001144059.10.002642
11726905_a_atARHGAP20Rho GTPase activating protein 20NM_020809.20.002644
11724735_a_atPDPNpodoplaninBC014668.10.002735
11755796_a_atADAM9ADAM metallopeptidaseBC143924.10.002822
domain 9
11726017_a_atC17orf63chromosome 17 open readingAU2533460.002907
frame 63
11741286_a_atCCRL1chemokine (C-C motif)AF110640.10.002908
receptor-like 1
11743910_atFAM69Afamily with sequenceBQ0153160.002927
similarity 69, member A
11756911_a_atC1QTNF3C1q and tumor necrosis factorBX640995.10.002969
related protein 3
11746361_a_atC7orf58chromosome 7 open readingBC030538.20.002971
frame 58
11715703_s_atITGA5integrin, alpha 5 (fibronectinNM_002205.20.002995
receptor, alpha polypeptide)
11735913_s_atTNXBtenascin XBBC125114.10.003064
11730236_s_atMYADMmyeloid-associatedAY358582.10.003084
differentiation marker
11718267_a_atANGPTL2angiopoietin-like 2NM_012098.20.003114
11723217_x_atSFXN3sideroflexin 3NM_030971.30.003152
11720286_a_atTRAK1trafficking protein, kinesinBC015922.10.003236
binding 1
11717133_a_atMAFGv-maf musculoaponeuroticBF3404480.003272
fibrosarcoma oncogene
homolog G (avian)
11717340_atPTGFRNprostaglandin F2 receptorNM_020440.20.003311
negative regulator
11729541_a_atCAMKK2calcium/calmodulin-AB081337.10.003359
dependent protein kinase
kinase 2, beta
11718268_a_atANGPTL2angiopoietin-like 2AY358274.10.003373
11717413_a_atWIPI1WD repeat domain,NM_017983.50.003406
phosphoinositide interacting 1
11716226_a_atLIMA1LIM domain and actin binding 1BC136763.10.003456
11740588_atBDKRB2bradykinin receptor B2NM_000623.30.003464
11741128_a_atCAPN2calpain 2, (m/II) large subunitNM_001146068.10.003473
11717891_a_atECM1extracellular matrix protein 1BC023505.20.003509
11730385_atGREM2gremlin 2BG1504510.003541
11756245_s_atANXA5annexin A5CR607543.10.003586
11721499_x_atCTSAcathepsin ANM_001127695.10.003681
11717757_s_atRALAv-ral simian leukemia viralAA5489280.003773
oncogene homolog A (ras
related)
11723075_a_atBCL9LB-cell CLL/lymphoma 9-likeAY296059.10.003835
11748650_a_atADAM33ADAM metallopeptidaseBC125113.10.003846
domain 33
11758676_s_atRHOQras homolog gene family,R231250.003853
member Q
11724260_a_atTRIOtriple functional domainAF091395.10.004049
(PTPRF interacting)
11724541_s_atVWFvon Willebrand factorNM_000552.30.004078
11716549_s_atISLRimmunoglobulin superfamilyNM_005545.30.0042
containing leucine-rich repeat
11724228_atRBMS1RNA binding motif, singleBC080620.10.004204
stranded interacting protein 1
11752423_a_atF13A1coagulation factor XIII, A1AK304335.10.004293
polypeptide
11757340_s_atRHOQras homolog gene family,BM6775150.004317
member Q
11750650_a_atPAMR1peptidase domain containingAK297092.10.004367
associated with muscle
regeneration 1
11735263_s_atSCN2Asodium channel, voltage-NM_001040142.10.004453
gated, type II, alpha subunit
11731682_atCD70CD70 moleculeNM_001252.30.004492
11737108_a_atCCRL1chemokine (C-C motif)NM_178445.10.004501
receptor-like 1
11743251_s_atMMP2matrix metallopeptidase 2BX3570540.004507
(gelatinase A, 72 kDa
gelatinase, 72 kDa type IV
collagenase)
11727782_a_atTPM4tropomyosin 4NM_003290.20.004515
11755955_a_atFAPfibroblast activation protein,AL832166.10.004528
alpha
11725868_atSSC5Dscavenger receptor cysteine-NM_001144950.10.004768
rich glycoprotein
TABLE 12 — Type I Dermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
11718273_a_atEIF3Leukaryotic translationNM_016091.20.000001
initiation factor 3, subunit L
11729152_a_atEIF3Meukaryotic translationNM_006360.30.000006
initiation factor 3, subunit M
11755203_x_atRPL21ribosomal protein L21BX647669.10.000006
11757356_x_atRPL30ribosomal protein L30BM8557600.000008
11717236_x_atRPS7ribosomal protein S7NM_001011.30.000009
11745362_x_atRPS11ribosomal protein S11BC100025.10.000009
11757363_x_atRPS15Aribosomal protein S15aDB3131570.000009
200062_PM_s_atRPL30ribosomal protein L30L05095.10.000009
11716092_x_atCKS1BCDC28 protein kinaseNM_001826.20.00001
regulatory subunit 1B
11743094_atSPRR4small proline-rich protein 4BC069445.10.000011
11757421_x_atRPL31ribosomal protein L31CD6872300.000011
11718274_s_atEIF3Leukaryotic translationNM_016091.20.000012
initiation factor 3, subunit L
11715376_a_atRPS11ribosomal protein S11NM_001015.30.000015
11757773_x_atNCRNA00275non-protein coding RNA 275BF1851650.000015
11753659_x_atRPL30ribosomal protein L30BC095426.10.000016
11753694_x_atRPS15Aribosomal protein S15aAB062400.10.000017
11755956_x_atPOLE3polymerase (DNA directed),AF070640.10.000017
epsilon 3 (p17 subunit)
200063_PM_s_atNPM1nucleophosmin (nucleolarBC002398.10.000017
phosphoprotein B23,
numatrin)
11740643_a_atCYP4F8cytochrome P450, family 4,AF133298.10.00002
subfamily F, polypeptide 8
11757305_x_atRPSAP58ribosomal protein SABI7627260.000021
pseudogene 58
11715958_s_atRPL7ribosomal protein L7NM_000971.30.000023
11719783_atRPS23ribosomal protein S23D14530.10.000027
11745154_a_atNCLnucleolinBC006516.20.000027
11720183_s_atEEF1B2eukaryotic translationNM_001959.30.000029
elongation factor 1 beta 2
11753691_x_atRPL24ribosomal protein L24CR456729.10.000031
200013_PM_atRPL24ribosomal protein L24NM_000986.10.000034
11718275_x_atEIF3Leukaryotic translationNM_016091.20.000037
initiation factor 3, subunit L
11744326_s_atRPL37ribosomal protein L37BC079477.10.000037
11757264_s_atRPS3ribosomal protein S3BU5884590.000038
200010_PM_atRPL11ribosomal protein L11NM_000975.10.000039
11757027_x_atRPL31ribosomal protein L31CR600452.10.000042
200018_PM_atRPS13ribosomal protein S13NM_001017.10.000046
11757375_x_atRPS15ribosomal protein S15AI6255630.000047
11754031_s_atCKS1BCDC28 protein kinaseBT007196.10.000051
regulatory subunit 1B
11715733_a_atNIPSNAP1nipsnap homolog 1 (C.NM_003634.20.000054
elegans)
11740644_x_atCYP4F8cytochrome P450, family 4,AF133298.10.000061
subfamily F, polypeptide 8
11736188_a_atORMDL3ORM1-like 3 ( S. cerevisiae )NM_139280.10.000071
11730527_a_atDAPK2death-associated proteinAF052941.10.000088
kinase 2
peroxisomal membrane
11723312_a_atPXMP2protein 2, 22kDaNM_018663.10.000092
11734833_s_atTAF9BTAF9B RNA polymerase II,NM_015975.40.000093
TATA box binding protein
(TBP)-associated factor,
31kDa
11732205_x_atNAP1L1nucleosome assemblyBX4138540.000099
protein 1-like 1
11752912_x_atEIF3Meukaryotic translationAK292139.10.000099
initiation factor 3, subunit M
11756437_x_atRPS18ribosomal protein S18BQ0574410.0001
11729011_atCDH22cadherin 22, type 2NM_021248.10.000107
11734329_atTNNtenascin NNM_022093.10.000107
11749558_a_atCYP4F8cytochrome P450, family 4,AK300530.10.000119
subfamily F, polypeptide 8
200029_PM_atRPL19ribosomal protein L19NM_000981.10.000121
11757386_x_atNPM1nucleophosmin (nucleolarAL5636000.000122
phosphoprotein B23,
numatrin)
11733774_a_atRPL37ribosomal protein L37NM_000997.40.000123
11729427_a_atGLI1GLI family zinc finger 1NM_005269.20.000126
11754066_x_atNPM1nucleophosmin (nucleolarBT007011.10.000128
phosphoprotein B23,
numatrin)
11715626_a_atRPL11ribosomal protein L11NM_000975.20.00013
11757489_x_atRPL22ribosomal protein L22AW2685280.00013
11757355_x_atRPL41ribosomal protein L41BU9589940.000138
11752726_x_atGNB2L1guanine nucleotide bindingAY159316.10.000144
protein (G protein), beta
polypeptide 2-like 1
11728288_a_atKRT15keratin 15NM_002275.30.000153
11756783_a_atTFtransferrinBC045772.10.000155
11757331_x_atRPL13Aribosomal protein L13aBF6884810.000157
11744365_a_atNCRNA00275non-protein coding RNA 275AY513722.10.000159
11739727_x_atNAP1L1nucleosome assemblyBE9657600.00016
protein 1-like 1
200074_PM_s_atRPL14ribosomal protein L14U16738.10.000161
200089_PM_s_atRPL4ribosomal protein L4AI9538860.000162
11734331_a_atTNNtenascin NBC136619.10.000163
11757906_x_atRPL10ribosomal protein L10AL5589500.000167
11715645_s_atC22orf28chromosome 22 openNM_014306.40.00018
reading frame 28
11756875_x_atCOMMD6COMM domain containing 6CR603325.10.000184
11722318_a_atEFNB3ephrin-B3NM_001406.30.000198
11756878_a_atFBLfibrillarinCR593763.10.000198
11736721_x_atRPL32ribosomal protein L32NM_001007073.10.000199
11720184_x_atEEF1B2eukaryotic translationNM_001959.30.0002
elongation factor 1 beta 2
11749786_x_atHNRNPFheterogeneous nuclearAK296696.10.000201
ribonucleoprotein F
11717058_x_atRPL5ribosomal protein L5NM_000969.30.00021
11752911_a_atEIF3Meukaryotic translationAK292139.10.000211
initiation factor 3, subunit M
11730790_x_atNPM1nucleophosmin (nucleolarAK290652.10.000213
phosphoprotein B23,
numatrin)
11753680_x_atRPL21ribosomal protein L21CR457032.10.000213
200022_PM_atRPL18ribosomal protein L18NM_000979.10.000213
200014_PM_s_atHNRNPCheterogeneous nuclearNM_004500.10.000215
ribonucleoprotein C (C1/C2)
11742667_x_atRPS28ribosomal protein S28NM_001031.40.000242
200082_PM_s_atRPS7ribosomal protein S7AI8055870.00025
11728380_x_atNACA2nascent polypeptide-NM_199290.20.000252
associated complex alpha
subunit 2
11756140_s_atRPL4ribosomal protein L4BX4472180.000254
11716304_a_atABHD14Babhydrolase domainNM_032750.20.000267
containing 14B
11758357_x_atRPL9ribosomal protein L9BF1726130.000272
11715280_s_atKRT17keratin 17g1973830310.000274
11739813_a_atFZD1frizzled homolog 1BF6756720.000295
(Drosophila)
11721885_s_atCDC42cell division cycle 42 (GTPNM_001039802.10.000307
binding protein, 25kDa)
11720954_s_atRPL30ribosomal protein L30NM_000989.20.000309
11743688_atGLI2GLI family zinc finger 2AB209354.10.000312
11720599_s_atSUB1SUB1 homologNM_006713.30.000315
( S. cerevisiae )
11725875_atWDR66WD repeat domain 66NM_144668.40.000318
11733496_x_atCOMMD6COMM domain containing 6AA5354450.000323
11727795_x_atEIF3Eeukaryotic translationNM_001568.20.000327
initiation factor 3, subunit E
11756215_x_atUBA52ubiquitin A-52 residueBU6193230.000331
ribosomal protein fusion
product 1
11757059_x_atRPL36Aribosomal protein L36aCR617894.10.000331
200012_PM_x_atRPL21ribosomal protein L21NM_000982.10.000335
11718344_a_atCNOT7CCR4-NOT transcriptionNM_013354.50.00035
complex, subunit 7
11717235_s_atRPS7ribosomal protein S7NM_001011.30.000352
11757113_a_atSNHG1small nucleolar RNA host6E8367470.000365
gene 1 (non-protein coding)
11743679_a_atPTCH1patched 1DB2990150.000374
11744366_a_atNCRNA00275non-protein coding RNA 275CR936805.10.000378
TABLE 13 — Type II Epidermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11729461_a_atCTNScystinosis, nephropathicNM_001031681.20.000105
11737824_a_atSTX16syntaxin 16NM_001134773.10.000753
11731828_atGPC2glypican 2NM_152742.10.000819
11757259_x_atSCARNA9Lsmall Cajal body-specificNR_023358.10.000852
RNA 9-like
(retrotransposed)
11728498_a_atSVILsupervillinNM_003174.30.001387
11733298_a_atVIPR1vasoactive intestinalNM_004624.30.00166
peptide receptor 1
11754972_s_atBAZ2Abromodomain adjacent toAK127775.10.001742
zinc finger domain, 2A
11732899_s_atSULT1AIsulfotransferase family,NM_177528.10.001887
cytosolic, 1A, phenol-
preferring, member 1
11716708_a_atDDR1discoidin domain receptorNM_013993.20.001925
tyrosine kinase 1
11757623_s_atRNF5ring finger protein 5AA9234670.00209
11715799_s_atBAT2L1HLA-B associatedNM_013318.30.002325
transcript 2-like 1
11756190_a_atCLK3CDC-like kinase 3CD7431180.002384
11726634_a_atMYST3MYST histoneNM_001099412.10.002824
acetyltransferase
(monocytic leukemia) 3
11752331_s_atSULT1A4sulfotransferase family,BC111011.10.002837
cytosolic, 1A, phenol-
preferring, member 4
11731093_s_atBRD1bromodomain containingNM_014577.10.002905
1
11744831_a_atRPAINRPA interacting proteinAY775316.10.002976
11744173_x_atDNAJC4DnaJ (Hsp40) homolog,BQ2677910.00329
subfamily C, member 4
11723546_s_atPLD1phospholipase D1,BF4340880.003418
phosphatidylcholine-
specific
11732589_a_atZNF467zinc finger protein 467NM_207336.10.004153
11721165_a_atKHNYNKH and NYN domainNM_015299.20.00435
containing
11730324_s_atSLC38A9solute carrier family 38,NM_173514.20.004534
member 9
11739669_atSS18L1synovial sarcomaAB014593.10.004553
translocation gene on
chromosome 18-like 1
11758140_s_atCPSF6cleavage andBU6893320.004569
polyadenylation specific
factor 6, 68kDa
11721912 atMDM4Mdm4 p53 bindingNM_002393.30.004611
protein homolog (mouse)
11744830_x_atNPIPL3nuclear pore complexAK303166.10.004653
interacting protein-like 3
11729100_a_atTTC18tetratricopeptide repeatNM_145170.30.004727
domain 18
11757896_s_atC1orf63chromosome 1 openR815380.004766
reading frame 63
11715976_a_atVGLL4vestigial like 4NM_001128219.10.004868
(Drosophila)
11729196_a_atSTX16syntaxin 166E7827540.004954
11758055_x_atRGPD8RANBP2-like and GRIPBQ0054330.005005
domain containing 8
11721624_s_atWSB1WD repeat and SOCS box-NM_015626.80.005017
containing 1
11720589_s_atPHF21APHD finger protein 21ABU7334370.005058
11720895_atSOS1son of seven less homologBM9704180.005891
1 (Drosophila)
11761133_atKDM5Clysine (K)-specificEF613277.10.006011
demethylase 5C
11726189_x_atHCFC1R1host cell factor C1NM_017885.20.006166
regulator 1 (XPO1
dependent)
11721598_a_atEFSembryonal Fyn-associatedNM_032459.10.006547
substrate
11745431_a_atSVILsupervillinBC092440.10.006666
11740447_x_atBTN3A1butyrophilin, subfamily 3,NM_194441.20.006686
member Al
11726515_a_atCLK4CDC-like kinase 4AF294429.10.006691
11746529_x_atTNFRSF14tumor necrosis factorBC029848.10.006897
receptor superfamily,
member 14 (herpesvirus
entry mediator)
11759308_s_atMAGI1membrane associatedAL050184.10.006929
guanylate kinase, WW
and PDZ domain
containing 1
11749473_a_atMEF2Dmyocyte enhancer factorBC040949.10.007372
2D
11719128_a_atLMF2lipase maturation factor 2NM_033200.10.007569
11762365_x_atKIAA0415KIAA0415AB007875.10.007605
11716129_atIGF2Rinsulin-like growth factorNM_000876.20.007692
2 receptor
11717989_a_atSUN1Sad1 and UNC84 domainNM_001130965.10.007807
containing 1
11755196_a_atCORO6coronin 6AK092430.10.007848
11755758_s_atNLRC5NLR family, CARD domainAK090439.10.00788
containing 5
11716283_atPAPD7PAP associated domainNM_006999.30.008191
containing 7
11730449_a_atDHRS12dehydrogenase/reductaseNM_024705.10.008218
(SDR family) member 12
11718728_a_atZNF655zinc finger protein 655NM_001083956.10.008286
11718820_atTSC1tuberous sclerosis 1NM_000368.30.008558
11729483_a_atKLF8Kruppel-like factor 8NM_007250.40.008607
11754192_s_atSRSF11serine/arginine-richCR614713.10.009136
splicing factor 11
11758557_s_atZFP36L1zinc finger protein 36,AI7585050.009209
C3H type-like 1
11723598_x_atMAP2K7mitogen-activated proteinNM_145185.20.009355
kinase kinase 7
11754541_a_atCCDC45coiled-coil domainAW1670960.00982
containing 45
11757630_s_atHERPUD2HERPUD family member 2AA7092650.010052
11718536_s_atNKTRnatural killer-tumorNM_005385.30.010291
recognition sequence
11755674_s_atRALGAPAIRal GTPase activatingDQ786317.10.010335
protein, alpha subunit 1
(catalytic)
11757591_s_atPAN3PAN3 poly(A) specificDB3148690.010593
ribonuclease subunit
homolog ( S. cerevisiae )
11724312_a_atSH3BP2SH3-domain bindingNM_001145855.10.010664
protein 2
11757197_s_atNCRNA00201non-protein coding RNANR_026778.10.010882
201
11759150_atCNOT4CCR4-NOT transcriptionBC035590.10.011523
complex, subunit 4
11718939_s_atTNFAIP3tumor necrosis factor,NM_006290.20.011563
alpha-induced protein 3
11738035_s_atRTN4reticulon 4AK302741.10.011615
11719084_a_atSMARCC2SWI/SNF related, matrixBF6634020.011872
associated, actin
dependent regulator of
chromatin, subfamily c,
member 2
11736501_x_atSS18synovial sarcomaNM_005637.20.011911
translocation,
chromosome 18
11755811_a_atZNF266zinc finger protein 266AL833503.10.012172
11720362_atPHIPpleckstrin homologyCR600369.10.012352
domain interacting
protein
11724758_s_atGPBP1L1GC-rich promoter bindingNM_021639.40.012429
protein 1-like 1
solute carrier family 38,
11754821_s_atSLC38AImember 1AI4760370.012431
11758907_atZNF827zinc finger protein 827AA0319470.012473
trinucleotide repeat
11736498_a_atTNRC6Bcontaining 6BNM_015088.20.012866
11716010_s_atDYNC1LI2dynein, cytoplasmic 1,NM_006141.20.01317
light intermediate chain 2
11745723_a_atMALAT1metastasis associatedBX538238.10.013758
lung adenocarcinoma
transcript 1 (non-protein
coding)
11758584_s_atSTYXserine/threonine/tyrosineN343050.013878
interacting protein
11757558_s_atLONRF1LON peptidase N-terminalBF6804380.014197
domain and ring finger 1
11750922_x_atAMTaminomethyltransferaseAK296177.10.0143
11718558_s_atMKRN1makorin ring fingerNM_001145125.10.014465
protein 1
11723112_a_atCCDC84coiled-coil domain
containing 84NM_198489.10.014471
11757808_s_atREREarginine-glutamic acidBM7066680.014565
dipeptide (RE) repeats
11763191_atPRICKLE3prickle homolog 3AK303308.10.014697
(Drosophila)
11757821_s_atLDB1LIM domain binding 1AW2712880.014809
11755194_s_atCCN L2cyclin L2AK000685.10.014941
11720122_atGIGYF1GRB10 interacting GYFNM_022574.40.014956
protein 1
hypothetical protein
11763351_atLOC286052LOC286052CK8194550.014973
11722752_a_atC14orf43chromosome 14 openNM_194278.30.015053
reading frame 43
11757958_s_atPOGZpogo transposableAI3749310.015063
element with ZNF domain
11734056_atPTGR2prostaglandin reductase 2NM_152444.20.015377
11722715_atSTK35serine/threonine kinaseNM_080836.20.015673
35
11722134_a_atTNFRSF25tumor necrosis factorNM_148965.10.015688
receptor superfamily,
member 25
11715192_s_atC7orf46chromosome 7 openg1882196210.015694
reading frame 46
11720795_s_atNUPL1nucleoporin like 1NM_014089.30.016154
11729510_a_atWDR33WD repeat domain 33NM_001006623.10.016469
11724066_s_atHCFC1R1host cell factor C1NM_001002018.10.016491
regulator 1 (XPO1
dependent)
11718534_atNKTRnatural killer-tumorAI3618050.016611
recognition sequence
11741625_a_atSLC22A23solute carrier family 22,NM_021945.50.016631
member 23
11722305_atARHGAP23Rho GTPase activatingNM_020876.10.01665
protein 23
11764248_s_atLDLRAD3low density lipoproteinAW0437820.016656
receptor class A domain
containing 3
TABLE 14 — Type II Epidermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
homeodomain interacting
11719408_a_atHIPK2protein kinase 2BM6791840.000155
11739028_s_atCLTCclathrin, heavy chain (Hc)BX3953780.00019
11747337_x_atEIF3Ieukaryotic translationU36764.10.000378
initiation factor 3, subunit I
TBC1 domain family,
11749845_a_atTBC1D22Amember 22AAK301445.10.000577
sec1 family domain
11723960_atSCFD2containing 2BC032453.10.000699
proteasome (prosome,
macropain) subunit, beta
11717105_a_atPSMB5type, 5NM_001144932.10.00071
proteasome (prosome,
macropain) 26S subunit,
11716545_x_atPSMC1ATPase, 1NM_002802.20.00077
1-acylglycerol-3-phosphate
O-acyltransferase 5
(lysophosphatidic acid
11730754_s_atAGPAT5acyltransferase, epsilon)CB3066090.00077
11750994_a_atSYAP1synapse associated protein 1AK295322.10.000788
11754977_x_atCTSBcathepsin BCR614817.10.000808
ATPase, H+ transporting,
lysosomal 9kDa, V0 subunit
200096_PM_s_atATP6V0E1e1AI8622550.000889
serpin peptidase inhibitor,
clade B (ovalbumin),
11738899_a_atSERPINB12member 12NM_080474.10.000913
G-rich RNA sequence
11747533_a_atGRSF1binding factor 1AK298883.10.000973
proteasome (prosome,
macropain) 26S subunit,
11733918_a_atPSMD14non-ATPase, 14BC066336.10.001091
11753572_a_atTMEM85transmembrane protein 85AY336092.10.001121
glucosidase, alpha; neutral
11738988_a_atGANABABAK302752.10.001195
golgi reassembly stacking
11751303_s_atGORASP2protein 2, 55kDaAK293640.10.001298
mitochondrial ribosomal
11719482_a_atMRPL21protein L21NM_181515.10.001366
proteasome(prosome,
macropain) subunit, beta
11715943_x_atPSMB1type, 1NM_002793.30.001475
11749935_s_atTPM3tropomyosin 3AK298678.10.001523
succinate dehydrogenase
complex, subunit C, integral
11736759_s_atSDHCmembrane protein, 15kDaAB211234.10.001635
tyrosine 3-
monooxygenase/tryptophan
5-monooxygenaseactivation
11731397_a_atYWHABprotein, beta polypeptideAI8663700.001646
mediator complex subunit
11751557_s_atMED2727AK298436.10.001692
transmembrane BAX
11747146_s_atTMBIM6inhibitor motif containing 6AK304577.10.001727
N-ethylmaleimide-sensitive
11716972_s_atNSFfactorNM_006178.20.001747
proteasome (prosome,
macropain) subunit, beta
11754009_a_atPSMB5type, 5BT006777.10.001747
mitochondrial ribosomal
11717459_a_atMRPL39protein L39NM_017446.30.001824
mitochondrial ribosomal
11742273_a_atMRPL33protein L33AF420602.10.001825
11739599_a_atZNF398zinc finger protein 398BU7364960.001891
11747534_a_atRSU1Ras suppressor protein 1BC008691.10.002033
nucleosome assembly
11747507_x_atNAP1L4protein 1-like 4AK316548.10.002069
nucleosome assembly
11747506_a_atNAP1L4protein 1-like 4AK316548.10.002092
phosphatidylinositol binding
11748665_a_atPICALMclathrin assembly proteinAK300275.10.002111
peptidylprolyl isomerase
11718035_atPPIL1(cyclophilin)-like 1AF151882.10.002124
11751336_x_atMKRN1makorin ring finger protein 1AK297361.10.002138
activating signal
cointegrator 1 complex
11720264_atASCC3subunit 3NM_006828.20.002301
11725037_a_at5EC23IP5EC23 interacting proteinAK000698.10.002534
mitochondrial ribosomal
11715772_x_atMRPL13protein L13NM_014078.40.002536
prolyl 4-hydroxylase, beta
11716173_a_atP4HBpolypeptideAK296206.10.002544
proteasome (prosome,
macropain) subunit, beta
11717106_x_atPSMB5type, 5NM_001144932.10.002579
ras homolog gene family,
200059_PM_s_atRHOAmember ABC001360.10.002604
11746655_a_atACAAIacetyl-CoA acyltransferase 1AK303251.10.002689
ATP synthase, H+
transporting, mitochondrial
Fo complex, subunit C3
11739201_a_atATP5G3(subunit 9)6E7368900.002714
ATP synthase, H+
transporting, mitochondrial
F1 complex, alpha subunit 1,
11728637_a_atATP5AIcardiac muscleNM_001001937.10.002718
BCL2-like 10 (apoptosis
11756013_a_atBCL2L10facilitator)BC143227.10.002726
proteasome (prosome,
macropain) subunit, beta
11754271_a_atPSMB4type, 4BM8498840.002734
proteasome (prosome,
macropain) 26S subunit,
11731415_a_atPSMD6non-ATPase, 6NM_014814.10.002807
succinate dehydrogenase
complex, subunit C, integral
11715840_s_atSDHCmembrane protein, 15kDaBC020808.10.002866
succinate-CoA ligase, ADP-
11755266_x_atSUCLA2forming, beta subunitAK001458.10.003146
sec1 family domain
11750876_a_atSCFD1containing 1AK301406.10.003266
SWI/SNF related, matrix
associated, actin dependent
regulator of chromatin,
11752770_a_atSMARCE1subfamily e, member 1AK294666.10.003311
SERPINE1 mRNA binding
11758800_x_atSERBP1protein 1AF151813.10.003464
11751835_a_atLTV1LTV1 homolog ( S. cerevisiae )AY326463.10.003472
11758319_x_atUBCubiquitin CBF6729500.003583
11729168_x_atDCTDdCMP deaminaseBC001286.10.003633
NADH dehydrogenase
(ubiquinone) 1 beta
11717159_a_atNDUFB3subcomplex, 3, 12kDaNM_002491.20.003697
phenylalanyl-tRNA
11744181_a_atFARS2synthetase 2, mitochondrialBG1927940.003735
ADP-ribosylation factor-like
11751412_x_atARL11AK301701.10.003805
proteasome (prosome,
macropain) subunit, alpha
11734682_a_atPSMA7type, 7NM_002792.20.003878
11750059_a_atMLXMAX-like protein XAK296114.10.003884
zinc finger, HIT-type
11715718_a_atZNHIT1containing 1NM_006349.20.003894
REX2, RNA exonuclease 2
11751360_x_atREX02homolog (S. cerevisiae)BC107887.10.003907
phosphoserine
11747349_s_atPSAT1aminotransferase 1BT006840.10.003982
mitochondrial ribosomal
11763975_a_atMRPS11protein S11DB3461410.004073
11716381_x_atBRP44brain protein 44NM_015415.20.00408
transmembrane emp24
protein transport domain
11751523_a_atTMED5containing 5AK293308.10.004086
small nuclear
ribonucleoprotein
11753974_s_atSNRPGpolypeptide GCR456918.10.004159
penta-EF-hand domain
11732216_s_atPEF1containing 1CR542139.10.004221
calpain 2, (m/II) large
11718978_x_atCAPN2subunitBC021303.20.004238
ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit
11763422_a_atATP6V0D1dlBX3973890.004241
11754060_a_atDAD1defender against cell deathCR542204.10.004283
signal peptidase complex
subunit 1 homolog (S.
11743905_a_atSPCS1cerevisiae)6E7821500.004361
proteasome (prosome,
macropain) subunit, beta
11715732_atPSMB3type, 3NM_002795.20.004369
Yip1 domain family, member
11751505_a_atYIPF11AK300240.10.004409
chromosome 11 open
11742925_a_atC11orf59reading frame 59CR457247.10.004503
S-phase kinase-associated
11715417_s_atSKP1protein 1BC020798.10.004548
phosphoglycerate mutase 1
11750438_x_atPGAM1(brain)AK296619.10.004563
11752939_x_atPGK1phosphoglycerate kinase 1AK298855.10.004575
cell division cycle 123
11723478_s_atCDC123homolog ( S. cerevisiae )NM_006023.20.004585
retinol dehydrogenase 11
11743034_x_atRDH11(all-trans/9-cis/11-cis)AK289427.10.004593
VAMP (vesicle-associated
membrane protein)-
11754086_x_atVAPAassociated protein A, 33kDaBT019618.10.004657
heterogeneous nuclear
ribonucleoprotein D (AU-
rich element RNA binding
11749303_s_atHNRNPDprotein 1, 37kDa)AK300149.10.004671
proteasome (prosome,
macropain) 26S subunit,
11753142_a_atPSMD11non-ATPase, 11AK300342.10.004673
11747719_a_atKIAA0391KIAA0391AK304066.10.004719
CWF19-like 1, cell cycle
11748974_s_atCWF19L1control (S. pombe)AK295303.10.004746
ATPase, H+ transporting,
lysosomal 56/58kDa, V1
11751133_a_atATP6V1B2subunit B2AK298819.10.004759
inner membrane protein,
11715552_a_atIMMTmitochondrialNM_006839.20.004766
11747365_a_atQARSglutaminyl-tRNA synthetaseAK302867.10.004855
succinate dehydrogenase
complex, subunit D, integral
11758248_s_atSDHDmembrane proteinBF6960150.004909
eukaryotic translation
11753592_x_atEEF1Gelongation factor 1 gammaAK299876.10.004961
NADH dehydrogenase
(ubiquinone) 1 alpha
11715369_s_atNDUFA4subcomplex, 4, 9kDaBC105295.10.005125
11715499_x_atCBX3chromobox homolog 3U26312.10.005141
ATP synthase, H+
11715874_s_atATP5Htransporting, mitochondrialNM_006356.20.005143
Fo complex, subunit d
succinate dehydrogenase
complex, subunit D, integral
11758311_s_atSDHDmembrane proteinBF6977750.005199
11715883_x_atDAP3death associated protein 3NM_004632.20.005251
poly(A) binding protein,
cytoplasmic 4 (inducible
11754030_a_atPABPC4form)BC118568.10.00537
exocyst complex component
11749682_s_atEXOC55AK303531.10.005371
tetratricopeptide repeat
11718142_a_atTTC27domain 27NM_017735.30.005424
thioredoxin domain
11754067_a_atTXNDC9containing 9CR456935.10.005482
aldo-keto reductase family
1, member A1 (aldehyde
11716509_a_atAKR1A1reductase)NM_006066.20.005483
TABLE 15 — Type II Dermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11715351_atCOL1AIcollagen, type I, alpha 1NM_000088.30.000139
11715352_x_atCOL1AIcollagen, type I, alpha 1NM_000088.30.000375
11734105 a_atPNMAL2PNMA-like 2AB033009.10.001583
11763844_s_atUBXN6UBX domain protein 6CR590857.10.001819
11756896_a_atCOL6A6collagen, type VI, alpha 6AL713792.10.002188
chromosome 15 open reading
11715284_x_atC15orf40frame 40g2378586630.003648
platelet-derived growth
factor receptor, beta
11715852_atPDGFRBpolypeptideNM_002609.30.005919
phosphatidylinositol-5-
phosphate 4-kinase, type II,
11715888_s_atPIP4K2BbetaNM_003559.40.006199
chromosome 5 open reading
11724481_a_atC5orf13frame 13NM_004772.20.006404
11758388_s_atLHX8LIM homeobox 8DB3021690.006562
G protein-coupled receptor
11727836_a_atGPR7878NM_001014447.10.007388
family with sequence
11729827_atFAM110Bsimilarity 110, member BBCO24294.10.009523
family with sequence
11744562_x_atFAM176Bsimilarity 176, member BBC071697.10.009813
11725867_s_atEBF3early B-cell factor 3NM_001005463.10.009883
progestin and adipoQ
11749069_a_atPAQR4receptor family member IVAK295348.10.010054
corticotropin releasing
11723068_atCRHBPhormone binding proteinNM_001882.30.011101
fibronectin type III domain
11723174_a_atFNDC1containing 1NM_032532.20.011173
11717274_s_atCOL5AIcollagen, type V, alpha 1BQ0077620.012177
calcium/calmodulin-
dependent protein kinase
11729541_a_atCAMKK2kinase 2, betaAB081337.10.012395
11724848_a_atDIXDC1DIX domain containing 1DB3589540.013451
11726830_atANTXR1anthrax toxin receptor 1NM_018153.30.013945
transforming growth factor,
11727296_s_atTGFB3beta 3NM_003239.20.014199
exonuclease 3′-5′ domain
11759905_a_atEXD3containing 3BC110879.10.01495
transcription factor 7-like 1
11721372_atTCF7L1(T-cell specific, HMG-box)NM_031283.10.01515
fibroblast activation protein,
11755955_a_atalphaAL832166.1
FAP0.015704
matrix metallopeptidase 14
11725989_x_atMMP14(membrane-inserted)NM_004995.20.019095
11717272_atCOL5AIcollagen, type V, alpha 1AB371583.10.020092
chromosome 19 open reading
11739544_a_atC19orf12frame 12BX3281230.021
C-type lectin domain family 3,
11727867_a_atCLEC3Bmember BNM_003278.20.024069
calcium/calmodulin-
dependent protein kinase
11731645_a_atCAMKK2kinase 2, betaBCO26060.20.024228
aldo-keto reductase family 1,
member C2 (dihydrodiol
dehydrogenase 2; bile acid
binding protein; 3-alpha
hydroxysteroid
11729101_a_atAKR1C2dehydrogenase, type III)NM_205845.10.024814
hairy and enhancer of split 4
11726474_a_atHES4(Drosophila)NM_021170.30.025047
11725224_a_atZNF193zinc finger protein 193NM_006299.30.026826
11715350_a_atCOL1AIcollagen, type I, alpha 1BC036531.20.026857
matrix metallopeptidase 2
(gelatinase A, 72kDa
gelatinase, 72kDa type IV
11741377_a_atMMP2collagenase)NM_001127891.10.02687
NYN domain and retroviral
11722292_a_atNYNRINintegrase containingNM_025081.20.027121
11730404_atMEX3Bmex-3 homolog B (C. elegans)NM_032246.30.027161
thyroid hormone receptor,
alpha (erythroblastic
leukemia viral (v-erb-a)
11759126_a_atTHRAoncogene homolog, avian)CB0548730.02738
11744348_x_atCOL6A2collagen, type VI, alpha 2BC002484.20.027551
11720845_a_atCD248CD248 molecule, endosialinNM_020404.20.02836
11720372_atTESCtescalcinNM_017899.20.028677
syntrophin, alpha 1
(dystroph in-associated
protein Al, 59kDa, acidic
11752890_a_atSNTAIcomponent)AK301800.10.029777
11717273_atCOL5AIcollagen, type V, alpha 1BQ0077620.030174
aldehyde dehydrogenase1
11754184_a_atALDH1A3family, member A3BX538027.10.030605
TRIO and F-actin binding
11727155_a_atTRIOBPproteinNM_007032.50.030721
11727031_a_atSQSTM1sequestosome 1NM_003900.40.031363
11720846_atCD248CD248 molecule, endosialinNM_020404.20.031411
triple functional domain
11761938_a_atTRIO(PTPRF interacting)AB115332.10.032433
11718096_a_atMEF2Amyocyte enhancer factor 2ABC013437.20.03254
neuro-oncological ventral
11734906_a_atNOVAIantigen 1NM_002515.20.032886
R-spondin 3 homolog
11724619_atRSPO3(Xenopus laevis)NM_032784.30.033442
shisa homolog 3 (Xenopus
11726188_atSHISA3laevis)NM_001080505.10.033466
glutathione peroxidase 8
11729644_a_atGPX8(putative)AK074216.10.033979
adrenergic, alpha-2C-,
11756359_s_atADRA2CreceptorCR590957.10.034296
11747064_x_atANXAllannexin AllAK301047.10.034459
chromosome 16 open reading
11732785_a_atCl6orf45frame 45NM_001142469.10.035589
microtubule-associated
11727030_s_atMAP1Aprotein 1ANM_002373.50.036125
sema domain,
immunoglobulin domain (Ig),
short basic domain, secreted,
11748738_a_atSEMA3E(semaphorin) 3EAK303925.10.036605
leucine rich repeat containing
11721995_a_atLRRC3232NM_001128922.10.038953
host cell factor Cl regulator 1
11726189_x_atHCFC1R1(XPO1 dependent)NM_017885.20.039807
RGM domain family, member
11754792_a_atRGMAAAK125204.10.040435
protein phosphatase 1,
regulatory (inhibitor) subunit
11717123_a_atPPP1R12B12BNM_032105.10.043242
triple functional domain
11724260_a_atTRIO(PTPRF interacting)AF091395.10.044219
11759962_atTPRKBTP53RK binding proteinAY643713.10.045288
11733167_atLRRN4CLLRRN4 C-terminal likeBC053902.10.045766
trinucleotide repeat
11721703_s_atTN RC18containing 18NM_001080495.20.045935
ATPase, aminophospholipid
transporter (APLT), class I,
11725568_a_atATP8AItype 8A, member 1NM_001105529.10.046173
membrane metallo-
11741562_a_atMMEendopeptidaseNM_007287.20.046616
pleiomorphic adenoma gene-
11745820_s_atPLAGL1like 1BQ0269480.046856
C-type lectin domain family
11743696_atCLEC14A14, member ACA4124810.047788
11720277_a_atOLFML2Aolfactomedin-like 2ANM_182487.20.049248
TABLE 16 — Type II Dermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
microtubule-associated
11749128_x_atMAP7protein 7AK299355.10.000033
eukaryotic translation
11720184_x_atEEF162elongation factor 1 beta 2NM_001959.30.000101
sulfotransferase family 1E,
estrogen-preferring, member
11724155_atSULT1E11U08098.10.000109
200062_PM_s_atRPL30ribosomal protein L30L05095.10.000123
11742734_s_atWDR3WD repeat domain 3AK292438.10.000139
nucleosome assembly protein
11732205_x_atNAP1L11-like 1BX4138540.000141
11743604_s_atRRM1ribonucleotide reductase M16E6188150.000164
heterogeneous nuclear
11723197_atHNRNPA3ribonucleoprotein A3BX4343020.000178
ATP-binding cassette, sub-
11732684_a_atABCAI2family A (ABC1), member 12AF418105.10.000237
discs, large homolog 1
11739308_s_atDLG1(Drosophila)BM6819310.000254
11725875_atWDR66WD repeat domain 66NM_144668.40.000271
200082_PM_s_atRPS7ribosomal protein S7AI8055870.00036
200081_PM_s_atRPS6ribosomal protein S66E7417540.000371
nucleophosmin (nucleolar
phosphoprotein 623,
200063_PM_s_atNPM1numatrin)BC002398.10.000404
11757356_x_atRPL30ribosomal protein L30BM8557600.000405
11719783_atRPS23ribosomal protein S23D14530.10.000416
sulfotransferase family 1E,
estrogen-preferring, member
11724156_atSULT1E11NM_005420.20.000461
eukaryotic translation
11720183_s_atEEF162elongation factor 1 beta 2NM_001959.30.000477
11745154_a_atNCLnucleolinBC006516.20.000485
11715958_s_atRPL7ribosomal protein L7NM_000971.30.000491
11749558_a_atCYP4F8cytochrome P450, family 4,AK300530.10.000497
subfamily F, polypeptide 8
11755203_x_atRPL21ribosomal protein L21BX647669.10.000511
11728022_a_atTMEM45Atransmembrane protein 45ANM_018004.10.000533
eukaryotic translation
11718273_a_atEIF3Linitiation factor 3, subunit LNM_016091.20.000658
protein kinase, DNA-activated,
11757399_s_atPRKDCcatalytic polypeptideAV7603280.000698
chromosome 10 open reading
11736055_atC10orf32frame 32BG6962800.000732
steroid-5-alpha-reductase,
alpha polypeptide 1 (3-oxo-5
alpha-steroid delta 4-
11749267_a_atSRD5A1dehydrogenase alpha 1)AK315996.10.000744
transmembrane 9 superfamily
11716946_s_atTM9SF3member 3AF269150.10.000758
11726461_a_atPDCD2programmed cell death 2NM_144781.10.000759
11763318_s_atCSNK1A1casein kinase 1, alpha 1BC040473.10.000792
eukaryotic translation
11727794_s_atEIF3Einitiation factor 3, subunit ENM_001568.20.000802
phosphoinositide-3-kinase,
11731690_a_atPIK3C2Gclass 2, gamma polypeptideNM 004570.40.000846
11748052_x_atE124etoposide induced 2.4 mRNAAK316539.10.000851
11743094_atSPRR4small proline-rich protein 4BC069445.10.000998
11717236_x_atRPS7ribosomal protein S7NM_001011.30.001062
11718719_atK1AAI797K1AAI797NM_017794.30.001102
transcription elongation factor
11752908_a_atTCEA1A (SII), 1AK297729.10.001141
11753659_x_atRPL30ribosomal protein L30BC095426.10.001161
11717058_x_atRPL5ribosomal protein L5NM_000969.30.001214
chromosome 10 open reading
11736057_s_atC10orf32frame 32BU6856370.00123
phosphoserine
11742991_a_atPSAT1aminotransferase 1AK295222.10.001244
11758357_x_atRPL9ribosomal protein L9BF1726130.00126
200010_PM_atRPL11ribosomal protein L11NM_000975.10.001282
transcription factor AP-2
gamma (activating enhancer
11749776_a_atTFAP2Cbinding protein 2 gamma)AK301572.10.001283
serine peptidase inhibitor,
11727995_a_atSPINK5Kazal type 5DQ149928.10.001284
chromosome 14 open reading
11722185_atC14orf147frame 147NM_138288.30.001309
eukaryotic translation
11750883_a_atEIF2Ainitiation factor 2A, 65kDaAF109358.10.001327
200017_PM_atRPS27Aribosomal protein S27aNM_002954.10.001414
cytochrome P450, family 4,
11749559_x_atCYP4F8subfamily F, polypeptide 8AK300530.10.001416
11722308_a_atTP63tumor protein p63NM_003722.40.001433
nucleophosmin (nucleolar
phosphoprotein 623,
11754066_x_atNPM1numatrin)BT007011.10.001448
11743603_a_atRRM1ribonucleotide reductase M16E6188150.001462
serine peptidase inhibitor,
11754963_a_atSPINK5Kazal type 5AK301660.10.001558
hydroxysteroid (17-beta)
11747333_a_atHSD1764dehydrogenase 4AK295440.10.001571
nucleophosmin (nucleolar
phosphoprotein 623,
11757386_x_atNPM1numatrin)AL5636000.00169
cytochrome P450, family 4,
11751437_a_atCYP4F8subfamily F, polypeptide 8AK300539.10.001708
11726258_atRNF141ring finger protein 141BX5035430.001716
11720766_a_atMETTL9methyltransferase like 9AK074529.10.001743
coiled-coil domain containing
11743729_atCCDC4747AL5756930.001771
heterogeneous nuclear
11749786_x_atHNRNPFribonucleoprotein FAK296696.10.001879
eukaryotic translation
11729152_a_atEIF3Minitiation factor 3, subunit MNM_006360.30.001895
UDP glucuronosyltransferase 2
11737634_a_atUGT2A1family, polypeptide AlNM_006798.20.001986
11748044_a_atSCELsciellinBCO20726.10.002038
eukaryotic translation
11752912_x_atEIF3Minitiation factor 3, subunit MAK292139.10.002066
11736309_a_atCSNK1A1casein kinase 1, alpha 1L37042.10.002093
11727421_a_atCANXcalnexinC62438670.002106
11727425_s_atCANXcal nexinM94859.10.002182
ribosomal protein SA
11757305_x_atRPSAP58pseudogene 58617627260.002211
transmembrane emp24
200087_PM_s_atTMED2domain trafficking protein 2AK024976.10.002219
RAB11A, member RAS
11718030_atRAB11Aoncogene familyNM_004663.30.002258
11742887_a_atBAGSBCL2-associated athanogene 56Q0089340.00227
11746199_a_atMETTL9methyltransferase like 9AA5241990.002298
phosphoserine
11756182_s_atPSAT1aminotransferase 1AAI739180.002312
11727658_s_atKLK10kallikrein-related peptidase 10AF024605.10.002335
nucleosome assembly protein
11732204_a_atNAP1L11-like 1BX4138540.002341
11744334_x_atRPS17ribosomal protein S17BC071928.10.002403
DIM1 dimethyladenosine
transferase 1-like (S.
11748536_a_atDIMT1Lcerevisiae)BC002841.20.002406
11745155_s_atNCLnucleolinBC006516.20.002458
nucleophosmin (nucleolar
phosphoprotein B23,
11730790_x_atNPM1numatrin)AK290652.10.002509
cytochrome P450, family 4,
11740643_a_atCYP4F8subfamily F, polypeptide 8AF133298.10.002616
ATPase, Ca++ transporting,
11755057_s_atATP2C1type 2C, member 1AB037768.10.002687
phosphoserine
11742992_s_atPSAT1aminotransferase 1AK295222.10.002716
11757424_x_atRPL37ribosomal protein L37F349030.002789
peroxisomal membrane
11723312_a_atPXMP2protein 2, 22kDaNM_018663.10.002819
11756137_x_atBTF3basic transcription factor 3CA7720900.002824
11754054_x_atRPL3ribosomal protein L3L22453.10.002905
11750667_a_atRRM1ribonucleotide reductase M1AK297988.10.00292
RAB11A, member RAS
11751326_a_atRAB11Aoncogene familyAK300008.10.002998
11749040_a_atPGM2phosphoglucomutase 2AK297752.10.003008
11715376_a_atRPS11ribosomal protein S11NM_001015.30.003035
DEAD (Asp-Glu-Ala-Asp) box
11715849_a_atDDX47polypeptide 47NM_016355.30.003047
tRNA-yW synthesizing protein
11726829_atTYW1B1 homolog B ( S. cerevisiae)NM_001145440.10.003195
chromosome 14 open reading
11756267_x_atC14orf166frame 166BX3495470.003217
11756437_x_atRPS18ribosomal protein S18BQ0574410.003368
11715648_x_atADIPOR1adiponectin receptor 1AY424279.10.003389
prostaglandin E synthase 3
11747662_x_atPTGES3(cytosolic)AK298147.10.003391
solute carrier family 39 (zinc
11749546_a_at5LC39A6transporter), member 6AK301539.10.003463
protein disulfide isomerase
11745720_s_atPDIA6family A, member 6D49489.10.00351
200074_PM_s_atRPL14ribosomal protein L14U16738.10.003587
phosphogluconate
11746023_a_atPGDdehydrogenaseAK304423.10.003624
TABLE 17 — Type III Epidermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11725675_a_atRORARAR-related orphan receptor AAA0340120.00064
11732366_a_atSCAPERS-phase cyclin A-associatedBC015212.10.001096
protein in the ER
11739639_atCDK12cyclin-dependent kinase 12AW9685040.001477
11745215_a_atKBTBD4kelch repeat and BTB (POZ)CR457270.10.001496
domain containing 4
11730873_a_atRASSF5Ras association (RalGDS/AF-6)NM_182665.20.001694
domain family member 5
11718966_atNUFIP2nuclear fragile X mentalBU5337670.001959
retardation protein interacting
protein 2
11718513_x_atTSPAN14tetraspanin 14NM_030927.20.002425
11744585_a_atATRNattractinAK302730.10.003547
11755420_a_atKDM4Blysine (K)-specific demethylase 4BAK126854.10.003701
11720895_atSOS1son of sevenless homolog 1BM9704180.003776
(Drosophila)
11734873_a_atSCAPERS-phase cyclin A-associatedNM_020843.20.00429
protein in the ER
11759897_x_atOFD1oral-facial-digital syndrome 1BC042830.10.004666
11754251_a_atUSP36ubiquitin specific peptidase 36AK022913.10.005023
11736059_a_atKIF5Bkinesin family member 5BBC065267.10.005318
11754824_a_atHSPC159galectin-related proteinDB3231490.005358
11757991_s_atANKRD12ankyrin repeat domain 12AA3995830.006238
11744468_atSYNCRIPsynaptotagmin binding,AK056188.10.007087
cytoplasmic RNA interacting
protein
11754992_a_atCHD1chromodomain helicase DNABE5352230.007613
binding protein 1
11716283_atPAPD7PAP associated domainNM_006999.30.00802
containing 7
11722973_s_atFOXK1forkhead box K1NM_001037165.10.008695
11748149_a_atFNBP1formin binding protein 1AK293743.10.009063
11722125_a_atC3orf19chromosome 3 open readingAL5264670.009976
frame 19
11720007_a_atSTEAP4STEAP family member 4NM_024636.20.011197
11731506_a_atRAD23BRAD23 homolog B ( S. cerevisiae )NM_002874.30.011526
11724759_s_atCALM1calmodulin 1 (phosphorylaseNM_006888.30.011622
kinase, delta)
11718161_atKLF13Kruppel-like factor 13AF132599.10.012064
11726305_atC10orf84chromosome 10 open readingBC023577.20.012188
frame 84
11723962_atKIAAI143KIAAI143BC008468.10.012597
11740956_x_atPLEKHN1pleckstrin homology domainNM_032129.10.013256
containing, family N member 1
11722305_atARHGAP23Rho GTPase activating protein 23NM_020876.10.01353
family with sequence similarity
11726022_a_atFAM177AI177, member AIBC029559.10.01364
11754010_x_atGOLGA2golgin A2BT007248.10.013918
11729523_a_atNLRC5NLR family, CARD domainNM_032206.30.014235
containing 5
11723113_a_atCENPC1centromere protein C 1BC041117.10.0145
UPF1 regulator of nonsense
11754616_a_atUPF1transcripts homolog (yeast)AI6909630.014647
11722291_s_atZBTB43zinc finger and BTB domainAI7452250.014686
containing 43
11739805_a_atRASAL2RAS protein activator like 2AK075169.10.014761
11723502_atPRLRprolactin receptorAI4358380.014945
11726244_a_atRORARAR-related orphan receptor AU04898.10.01551
11736104_a_atZNF750zinc finger protein 750BC109037.10.015749
11723184_x_atCNOT6LCCR4-NOTt ranscription complex,BQ0253270.015988
subunit 6-like
11755058_a_atBAZ1Abromodomain adjacent to zincBC020636.10.016704
finger domain, 1A
11759600_atSFRS18Splicing factor, arginine/serine-AK027751.10.016758
rich 18
11744829_s_atHLA-Emajor histocompatibilityAK296822.10.016828
complex, class I, E
guanylate binding protein 2,
11719447_s_atGBP2interferon-inducibleBC073163.10.016832
11720541_atHSPC159galectin-related proteinNM_014181.20.017088
pleckstrin and Sec7 domain
11719028_a_atPSD3containing 3DB3143580.017377
11754462_a_atRSPRY1ring finger and SPRY domainAU2534430.017904
containing 1
11725676_a_atRORARAR-related orphan receptor ANM_002943.30.018226
11722290_a_atZBTB43zinc finger and BTB domainAI7452250.018329
containing 43
11723821_a_atSMURF2SMAD specific E3 ubiquitinAY014180.10.018461
protein ligase 2
11720111_atSNTB2syntrophin, beta 2 (dystrophin-BC036429.10.018669
associated protein AI, 59kDa,
basic component 2)
11736432_x_atPPP4R2protein phosphatase 4,BC128136.10.01869
regulatory subunit 2
11744000_a_atNFKBIAnuclear factor of kappa lightBX3678260.018695
polypeptide gene enhancer in B-
cells inhibitor, alpha
11759512_x_atCWC25CWC25 spliceosome-associatedCR7481270.018768
protein homolog ( S. cerevisiae )
11716095_s_atKLF6Kruppel-like factor 6CD3666980.019227
11754447_a_atRPS6KA5ribosomal protein S6 kinase,BM9688290.019584
90kDa, polypeptide 5
11719085_a_atSMARCC2SWI/SNF related, matrixAL5444350.01997
associated, actin dependent
regulator of chromatin, subfamily
c, member 2
11727506_x_atRAB21RAB21, member RAS oncogeneBC021901.10.020551
family
11720276_s_atTREX1three prime repair exonuclease 1NM_016381.30.020671
11724549_a_atRSBN1round spermatid basic protein 1AK292552.10.020675
11731645_a_atCAMKK2calcium/calmodulin-dependentBC026060.20.020762
protein kinase kinase 2, beta
11737413_atMICALCLMICAL C-terminal likeNM_032867.2_0.020903
11715938_x_atKHDRBS1KH domain containing, RNABC000717.10.021833
binding, signal transduction
associated 1
11747192_x_atNFICnuclear factor I/C (CCAAT-bindingAK289885.10.022039
transcription factor)
11729396_a_atNEK1NIMA (never in mitosis gene a)-Z25431.10.022138
related kinase 1
11727064_a_atANKRD11ankyrin repeat domain 11BU6746340.022386
11752626_a_atPBX1pre-B-cell leukemia homeobox 1AK299673.10.022397
11721119_a_atANKHD1-ANKHD1-EIF4EBP3 readthroughAF217646.10.022562
EIF4EBP3
11743648_a_atDCAF6DDB1 and CUL4 associated factorBF6728180.022893
6
11740362_a_atFOXN3forkhead box N3U68723.10.023025
11718869_x_atPALMDpalmdelphinCF5524540.023068
11727604_a_atEPB41L4Aerythrocyte membrane proteinNM_022140.30.023101
band 4.1 like 4A
11726633_s_atTRIM8tripartite motif-containing 8BCO21925.10.023187
11732370_a_atCUX1cut-like homeobox 1NM_181552.20.023258
11726113_a_atFAM46Bfamily with sequence similarityNM_052943.30.023515
46, member B
11729100_a_atTTC18tetratricopeptide repeat domainNM_145170.30.023862
18
11729259_a_atZNF644zinc finger protein 644BQ0146390.023971
11745806_a_atAMMECR1LAMME chromosomal region geneAK095871.10.024186
1-like
11717894_s_atPTP4AIprotein tyrosine phosphataseBC023975.20.024306
type IVA, member 1
11728765_a_atPVRL4poliovirus receptor-related 4BC010423.10.024371
11740747_a_atDNMT3ADNA (cytosine-5-)-AF480163.10.024617
methyltransferase 3 alpha
11718868_a_atPALMDpalmdelphinCF5524540.025394
11758133_s_atCOL4A3BPcollagen, type IV, alpha 3BE0468190.026883
(Goodpasture antigen) binding
protein
11749969_a_atTSPAN5tetraspanin 5AK295385.10.027108
11733899_a_atTROVE2TROVE domain family, member 2BX4450260.027171
11747743_x_atMTF2metal response element bindingAK302776.10.027946
transcription factor 2
11746790_a_atBECN1beclin 1, autophagy relatedAK298619.10.027999
11731573_a_atFRMD4BFERM domain containing 4BAU1474150.028099
11724271_a_atHLFhepatic leukemia factorEL9529520.028251
KRR1, small subunit (SSU)
processome component,
11728683_x_atKRR1homolog (yeast)U55766.10.02827
11758327_s_atBAZ1Abromodomain adjacent to zincBF8522550.02853
finger domain, 1A
11743300_a_atSRP72signal recognition particle 72kDaAK225430.10.028582
11719103_atCPNE3copine IIICB2505500.028667
11755895_a_atFAM129Afamily with sequence similarityAK095547.10.029014
129, member A
11721326_atC3orf14chromosome 3 open readingAF236158.10.029423
frame 14
11738035_s_atRTN4reticulon 4AK302741.10.029458
11746122_s_atZC3H11Azinc finger CCCH-type containingDA0947050.029486
11A
11724085_atDAPL1death associated protein-like 1NM_001017920.20.030615
11735181_a_atDLX2distal-less homeobox 2NM_004405.30.030619
TABLE 18 — Type III Epidermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
11743060_s_atCOMMD10COMM domain containing 10AL5726950.000211
11720515_s_atC9orf150chromosome 9 open readingNM_203403.10.000414
frame 150
11716897_x_atPPIEpeptidylprolyl isomerase ENM_006112.20.000535
(cyclophilin E)
11725787_a_atC4orf43chromosome 4 open readingNM_018352.20.000571
frame 43
11729680_a_atKHKketohexokinase (fructokinase)CR456801.10.000981
11745494_x_atERCC8excision repair cross-U28413.10.001042
complementing rodent repair
deficiency, complementation
group 8
11745948_a_atCHEK1CHK1 checkpoint homolog ( S .AK299783.10.0011
pombe )
11758965_atATG4CATG4 autophagy related 4AK027773.10.001439
homolog C ( S. cerevisiae )
11724079_s_atE2F2E2F transcription factor 2NM_004091.20.001667
11718280_s_atTRIAP1TP53 regulated inhibitor ofNM_016399.20.001683
apoptosis 1
11720459_s_atCAPRIN1cell cycle associated protein 1BQ0027680.001735
11720615_a_atTUBG2tubulin, gamma 2NM_016437.20.00174
11757673_x_atRPL39ribosomal protein L39BX4359160.001879
11720398_a_atNBNnibrinBC146797.10.002186
11734661_a_atCLSTN3calsyntenin 3NM_014718.30.0022
11726529_s_atBRCC3BRCA1/BRCA2-containingNM_024332.20.002236
complex, subunit 3
11758291_s_atMRPS10mitochondrial ribosomalBF7011420.002439
protein S10
11726660_a_atGPN3GPN-loop GTPase 3AY359078.10.002577
11734619_x_atALOX15Barachidonate 15-NM_001141.20.002749
lipoxygenase, type B
11719482_a_atMRPL21mitochondrial ribosomalNM_181515.10.002874
protein L21
11716896_a_atPPIEpeptidylprolyl isomerase ENM_006112.20.002936
(cyclophilin E)
11757498_s_atTMEM106Ctransmembrane protein 106CA12785540.003263
11722842_s_atENAHenabled homolog ( Drosophila )BC095481.10.003561
11722415_a_atHBS1LHBS1-like ( S. cerevisiae )BC040849.10.003563
11742050_a_atAPI5apoptosis inhibitor 5AK294724.10.003612
11719499_atMAOBmonoamine oxidase BNM_000898.40.003642
11717099_atHIST1H2BKhistone cluster 1, H2bkNM_080593.10.003648
11744666_atFAN1FANCD2/FANCI-associatedBC047882.10.003687
nuclease 1
11756910_x_atFANCD2Fanconi anemia,AL832427.10.00395
complementation group D2
11758535_s_atGPAMglycerol-3-phosphateAI0744010.003969
acyltransferase, mitochondrial
11719920_atFXC1fracture callus 1 homolog (rat)BC011014.10.004197
ring finger and CHY zinc finger
11719571_a_atRCHY1domain containing 1BC047393.10.004345
11763339_a_atSIVA1SIVA1, apoptosis-inducingAK128704.10.004492
factor
11740706_a_atNFRKBnuclear factor related toNM_006165.30.004845
kappaB binding protein
11730410_a_atPXMP4peroxisomal membraneNM_007238.40.005105
protein 4, 24 kDa
11739973_s_atNUAK1NUAK family, SNF1-likeBU6869940.005564
kinase, 1
11757687_x_atDAD1defender against cell death 1BU5358810.005572
11721430_a_atSYBUsyntabulin (syntaxin-NM_001099744.10.005683
interacting)
11722555_satHADHhydroxyacyl-CoACR591982.10.005987
dehydrogenase
11736367_a_atMCM10minichromosomeNM_182751.10.006448
maintenance complex
component 10
11739660_x_atPPCSphosphopantothenoylcysteineNM_001077447.10.0065
synthetase
11757604_a_atSAMM50sorting and assemblyBQ1862120.006505
machinery component 50
homolog ( S. cerevisiae )
11722398_s_atRWDD4RWD domain containing 4NM_152682.20.00654
11733866_a_atRARS2arginyl-tRNA synthetase 2,NM_020320.30.006608
mitochondrial
11722351_atSRSF8serine/arginine-rich splicingNM_032102.20.006693
factor 8
11726320_atERO1LERO1-like ( S. cerevisiae )NM_014584.10.006774
up-regulated during skeletal
muscle growth 5 homolog
11744384_x_atUSMG5(mouse)BC072683.10.006853
11733975_a_atDDHD2DDHD domain containing 2BU6313460.007241
11727533_a_atFEZ2fasciculation and elongationNM_001042548.10.007345
protein zeta 2 (zygin II)
11723462_a_atPHKBphosphorylase kinase, betaNM_001031835.20.007666
11718475_s_atIDH1isocitrate dehydrogenase 1NM_005896.20.007717
(NADP+), soluble
11744822_a_atNDUFB2NADH dehydrogenaseBC063026.10.007876
(ubiquinone) 1 beta
subcomplex, 2, 8 kDa
11757589_a_atNDUFA12NADH dehydrogenaseBU5371240.008475
(ubiquinone) 1 alpha
subcomplex, 12
11726186_x_atC12orf48chromosome 12 open readingNM_017915.20.008601
frame 48
11739972_atNUAK1NUAK family, SNF1-likeBU6869940.008782
kinase, 1
11755294_x_atNEBnebulinBC063136.10.008985
11740962_a_atUBA5ubiquitin-like modifierNM_198329.20.009092
activating enzyme 5
11753867_a_atNDUFA1NADH dehydrogenaseAB451304.10.009324
(ubiquinone) 1 alpha
subcomplex, 1, 7.5 kDa
11757665_x_atNDUFS5NADH dehydrogenaseAA9779960.009487
(ubiquinone) Fe-S protein 5,
15 kDa (NADH-coenzyme Q
reductase)
11757684_a_atTPD52L2tumor protein D52-like 2A18068210.009563
11731068_s_atFIGNL1fidgetin-like 1NM_022116.30.009587
11743064_atCDC6cell division cycle 6 homologCR598029.10.009677
( S. cerevisiae )
11746036_s_atCBR1carbonyl reductase 1AK311219.10.009851
11729763_a_atLSM10LSM10, U7 small nuclear RNANM_032881.10.010114
associated
11719268_atTNNC1troponin C type 1 (slow)NM_003280.20.010462
11758199_s_atRAD23BRAD23 homolog BBG5716000.010584
( S. cerevisiae )
11723291_a_atNDUFA1NADH dehydrogenaseNM_004541.30.010596
(ubiquinone) 1 alpha
subcomplex, 1, 7.5 kDa
11715771_a_atMRPL13mitochondrial ribosomalNM_014078.40.010834
protein L13
11746174_s_atIDH1isocitrate dehydrogenase 1BC012846.10.011295
(NADP+), soluble
11724432_x_atTRAPPC2trafficking protein particleNM_001011658.20.01144
complex 2
11746489_x_atGPAA1glycosylphosphatidylinositolBC006383.20.011462
anchor attachment protein 1
homolog (yeast)
11724120_a_atTRIM59tripartite motif-containing 59NM_173084.20.01188
11764061_s_atNDUFB3NADH dehydrogenaseAA8871830.012144
(ubiquinone) 1 beta
subcomplex, 3, 12 kDa
11758083_s_atHPGDhydroxyprostaglandinAI7437140.012171
dehydrogenase 15-(NAD)
11729715_a_atCBR1carbonyl reductase 1NM_001757.20.012312
11734864_x_atSARNPSAP domain containingNM_033082.30.012428
ribonucleoprotein
11717314_a_atHAUS1HAUS augmin-like complex,NM_138443.30.012462
subunit 1
11751523_a_atTMED5transmembrane emp24AK293308.10.012569
protein transport domain
containing 5
11754800_s_atGFM1G elongation factor,AK092293.10.012699
mitochondrial 1
11746042_s_atTRA2Btransformer 2 beta homologAK098191.10.01285
(Drosophila)
11736741_a_atMKI67antigen identified byNM_001145966.10.012861
monoclonal antibody Ki-67
11729333_atPADI1peptidyl arginine deiminase,NM_013358.20.013091
type!
11751291_a_atSFXN4sideroflexin 4AY269785.10.013333
11717991_a_atSIDT2SIDI transmembrane family,NM_001040455.10.013344
member 2
11748896_s_atCCRL1chemokine (C-C motif)AK304461.10.013521
receptor-like 1
11716395_a_atGPR56G protein-coupled receptor 56NM_001145774.10.013559
11729716_s_atCBR1carbonyl reductase 1NM_001757.20.01399
11716063_atTNCtenascin CNM_002160.20.014267
11758011_x_atEEF1A1eukaryotic translationBI4959520.014362
elongation factor 1 alpha 1
11720317_a_atDAD1defender against cell death 1NM_001344.20.014754
11720186_s_atMAD2L1MAD2 mitotic arrest deficient-NM_002358.30.014969
like 1 (yeast)
11725960_s_atCALM3calmodulin 3 (phosphorylaseNM_005184.20.015262
kinase, delta)
11730753_atAGPAT51-acylglycerol-3-phosphate 0-NM_018361.30.015361
acyltransferase 5
(lysophosphatidic acid
acyltransferase, epsilon)
11735839_atSTX19syntaxin 19NM_001001850.10.015426
11746655_a_atACAA1acetyl-CoA acyltransferase 1AK303251.10.015895
11744002_s_atMTHFD2methylenetetrahydrofolateBG0265310.015966
dehydrogenase (NADP+
dependent) 2,
methenyltetrahydrofolate
cyclohydrolase
11721296_a_atNDUFB1NADH dehydrogenaseNM_004545.30.016187
(ubiquinone) 1 beta
subcomplex, 1, 7 kDa
11725125_a_atNEBnebulinNM_004543.30.016335
11716624_s_atXPO1exportin 1 (CRM1 homolog,NM_003400.30.016341
yeast)
11759922_a_atPARD3par-3 partitioning defective 3BC071566.10.016372
homolog ( C. elegans )
TABLE 19 — Type III Dermis; Up-regulated
GeneTitan_IDGeneTitlePublic IDp
11733167_atLRRN4CLLRRN4 C-terminal likeBC053902.10.000101
11716549_s_atISLRimmunoglobulin superfamilyNM_005545.30.00021
containing leucine-rich repeat
11743191_a_atNTMneurotriminAI3432720.000486
11725753_a_atGRIA3glutamate receptor, ionotrophic,U10301.10.000741
AMPA 3
11741377_a_atMMP2matrix metallopeptidase 2NM_001127891.10.001476
(gelatinase A, 72 kDa gelatinase,
72 kDa type IV collagenase)
11717765_a_atMGLLmonoglyceride lipaseNM_007283.50.001622
11721372_atTCF7L1transcription factor 7-like 1 (T-cellNM_031283.10.001646
specific, HMG-box)
11722839_atLYARLy1 antibody reactive homologAW9585930.001955
(mouse)
11762135_at_PTPRKprotein tyrosine phosphatase,BC063596.10.002158
receptor type, K
11721467_s_atCD276CD276 moleculeNM_001024736.10.002325
11761134_atMYST3MYST histone acetyltransferaseBC142959.10.003233
(monocytic leukemia) 3
11720440_atOLFML2Bolfactomedin-like 2BNM_015441.10.003454
11745431_a_atSVILsupervillinBC092440.10.003484
11739746_s_atSVILsupervillinCD3669760.003636
11757808_s_atREREarginine-glutamic acid dipeptideBM7066680.003739
(RE) repeats
11725937_a_atLGALS3lectin, galactoside-binding,BC053667.10.003825
soluble, 3
11720274_x_atALKBH6alkB, alkylation repair homolog 6NM_032878.30.003968
( E. coli )
11755955_a_atFAPfibroblast activation protein, alphaAL832166.10.003989
11724619_atRSPO3R-spondin 3 homolog (XenopusNM_032784.30.004121
laevis)
11729170_x_atDUSP10dual specificity phosphatase 10AF179212.10.004193
11752038_a_atAQPEPlaeverinBC068560.10.004865
11720846_atCD248CD248 molecule, endosialinNM_020404.20.005206
11731143_a_atGPR133G protein-coupled receptor 133NM_198827.30.005394
11728451_a_atPCOLCE2procollagen C-endopeptidaseNM_013363.20.005523
enhancer 2
11731682_atCD70CD70 moleculeNM_001252.30.005777
11716226_a_atLIMA1LIM domain and actin binding 1BC136763.10.006288
11750244_a_atMGLLmonoglyceride lipaseAK304844.10.00649
11762370_x_atBNC1basonuclin 1L03427.10.006531
11729101_a_atAKR1C2aldo-keto reductase family 1,NM_205845.10.006587
member C2 (dihyd rod iol
dehydrogenase 2; bile acid
binding protein; 3-alpha
hydroxysteroid dehydrogenase,
type III)
11731649_x_atNTMneurotriminAY358331.10.006934
11716238_atARHGAP1Rho GTPase activating protein 1NM_004308.20.006953
11728498_a_atSVILsupervillinNM_003174.30.00696
11725517_x_atABCG1ATP-binding cassette, sub-family GNM_207627.10.007347
(WHITE), member 1
11728605_s_atLIMS1LIM and senescent cell antigen-NM_033514.20.007353
like domains 1
11752843_x_atSQSTM1sequestosome 1AK304877.10.007432
11757557_s_atCADM1cell adhesion molecule 1H232450.007475
11718269_x_atANGPTL2angiopoietin-like 2AY358274.10.007782
11747944_a_atPPFIA2protein tyrosine phosphatase,AK296380.10.008378
receptor type, f polypeptide
(PTPRF), interacting protein
(liprin), alpha 2
11761149_a_atC5orf45chromosome 5 open readingAK293901.10.008409
frame 45
11737357_a_atCNGA3cyclic nucleotide gated channelNM_001298.20.008783
alpha 3
11743250_a_atMMP2matrix metallopeptidase 2BX3570540.009096
(gelatinase A, 72 kDa gelatinase,
72 kDa type IV collagenase)
11725515_a_atABCG1ATP-binding cassette, sub-family GNM_207627.10.009131
(WHITE), member 1
11759362_x_atPHKG1phosphorylase kinase, gamma 1BC051327.10.009194
(muscle)
11717802_s_atATF5activating transcription factor 5BE3000550.009354
11723070_a_atCYTL1cytokine-like 1NM_018659.20.009527
11731650_a_atNTMneurotriminNM_001048209.10.009599
11720845_a_atCD248CD248 molecule, endosialinNM_020404.20.009838
11716322_s_atPRKCDBPprotein kinase C, delta bindingNM_145040.20.009887
protein
11718658_s_atCD34CD34 moleculeNM_001773.20.010659
11747945_x_atPPFIA2protein tyrosine phosphatase,AK296380.10.010696
receptor type, f polypeptide
(PTPRF), interacting protein
(liprin), alpha 2
11717764_x_atMGLLmonoglyceride lipaseBC006230.20.010744
11743251_s_atMMP2matrix metallopeptidase 2BX3570540.010854
(gelatinase A, 72 kDa gelatinase,
72 kDa type IV collagenase)
11731303_a_atDUSP10dual specificity phosphatase 10BC020608.10.010964
11719737_a_atFAM134Bfamily with sequence similarityBC053326.10.011265
134, member B
11758143_s_atDUSP8dual specificity phosphatase 8BE3509060.011421
11724441_x_atPTGISprostaglandin 12 (prostacyclin)NM_000961.30.011582
synthase
11737583_s_atSGCDsarcoglycan, delta (35 kDaNM_001128209.10.01169
dystrophin-associated
glycoprotein)
11729541_a_atCAMKK2calcium/calmodulin-dependentAB081337.10.011881
protein kinase kinase 2, beta
11737108_a_atCCRL1chemokine (C-C motif) receptor-NM_178445.10.012
like 1
11721507_atDVL3dishevelled, dsh homolog 3NM_004423.30.012974
(Drosophila)
11750245_x_atMGLLmonoglyceride lipaseAK304844.10.013107
11737946_a_atXPNPEP2X-prolyl aminopeptidaseBC143901.10.01347
(aminopeptidase P) 2, membrane-
bound
11727155_a_atTRIOBPTRIO and F-actin binding proteinNM_007032.50.013526
11720441_x_atOLFML2Bolfactomedin-like 2BNM015441.10.01374
11727773_atLARP6La ribonucleoprotein domainNM_197958.10.013995
family, member 6
11728499_x_atSVILsupervillinNM_003174.30.01402
11745659_s_atPOM121POM121 membrane glycoproteinBC130587.10.014097
11752562_x_atCDH13cadherin 13, H-cadherin (heart)AK294277.10.014197
11720617_atTRIM9tripartite motif-containing 9NM_015163.50.014562
11757548_s_atADAMTSL1ADAMTS-like 1DB3297330.014859
11753179_s_atFAM134Bfamily with sequence similarityBC030517.10.014991
134, member B
11729285_a_atNFU1NFU1 iron-sulfur cluster scaffold
homolog (S. cerevisiae)NM_001002755.10.01519
11741286_a_atCCRL1chemokine (C-C motif) receptor-AF110640.10.015787
like 1
11732315_a_atSGCDsarcoglycan, delta (35 kDaAF010236.10.015795
dystrophin-associated
glycoprotein)
11715852_atPDGFRBplatelet-derived growth factorNM_002609.30.016136
receptor, beta polypeptide
11730404_atMEX3Bmex-3 homolog B ( C. elegans )NM_032246.30.0163
11751986_atMMP19matrix metallopeptidase 19U38320.10.016486
11731122_a_atVASH2vasohibin 2BC051856.10.016505
11732785_a_atC16orf45chromosome 16 open readingNM_001142469.10.017241
frame 45
11757765_s_atSGCDsarcoglycan, delta (35 kDaAA4012480.017347
dystroph in-associated
glycoprotein)
11743143_atCOX11COX11 cytochrome c oxidaseAK293851.10.017504
assembly homolog (yeast)
11724142_s_atRAB11FIP2RAB11 family interacting protein 2DB3565440.017868
(class I)
11723075_a_atBCL9LB-cell CLL/lymphoma 9-likeAY296059.10.017989
11747704_a_atCLDN11claudin 11AK294087.10.017998
11716376_atSERPINA5serpin peptidase inhibitor, clade ANM_000624.40.018046
(alpha-1 antiproteinase,
antitrypsin), member 5
11756879_a_atSTARD9StAR-related lipid transfer (START)CR936665.10.018874
domain containing 9
11733166_atLRRN4CLLRRN4 C-terminal likeNM_203422.10.018933
11720163_atVEGFCvascular endothelial growth factorNM_005429.20.018951
C
11754821_s_atSLC38A1solute carrier family 38, member 1AI4760370.019062
11720082_atCBX6chromobox homolog 6NM_014292.30.020169
11762231_x_atBBS1Bardet-Biedl syndrome 1AK294962.10.020213
11732462_atADAMTSL1ADAMTS-like 1AK123028.10.020317
11761563_x_atHEATR1HEAT repeat containing 1BC062442.10.0204
11727714_atKCNJ12potassium inwardly-rectifyingNM_021012.40.020553
channel, subfamily J, member 12
11727780_a_atSCARA5scavenger receptor class A,NM_173833.40.020636
member 5 (putative)
11749436_a_atNFICnuclear factor I/C (CCAAT-bindingAK297825.10.020877
transcription factor)
11731209_s_atC15orf59chromosome 15 open readingNM_001039614.10.021422
frame 59
11727125_a_atPVRL3poliovirus receptor-related 3BE5449270.021561
11744741_atLOH3CR2Aloss of heterozygosity, 3,AF086709.20.021592
chromosomal region 2, gene A
11717891_a_atECM1extracellular matrix protein 1BC023505.20.021868
TABLE 20 — Type III Dermis; Down-regulated
GeneTitan_IDGeneTitlePublic IDp
11727158_a_atSTRBPspermatid perinuclearNM_018387.30.000131
RNA binding protein
11756850_x_atCCT8chaperonin containingCR612497.10.000172
TCP1, subunit 8 (theta)
11754000_x_atCD58CD58 moleculeCR456939.10.000222
11737761_a_atHSD17B4hydroxysteroid (17-beta)
dehydrogenase 4NM_000414.20.000267
11754276_a_atRAD23BRAD23 homolog B ( S.BG5014960.000343
cerevisiae )
11743094_atSPRR4small proline-rich proteinBC069445.10.000362
4
11724156_atSULT1E1sulfotransferase familyNM_005420.20.000395
1E, estrogen-preferring,
member 1
11749267_a_atSRD5A1steroid-5-alpha-AK315996.10.000399
reductase, alpha
polypeptide 1 (3-oxo-5
alpha-steroid delta 4-
dehydrogenase alpha 1)
11720183_s_atEEF1B2eukaryotic translationNM_001959.30.000428
elongation factor 1 beta 2
11737053_s_atHSPD1heat shock 60 kDa proteinNM_002156.40.000467
1 (chaperonin)
11740377_a_atPXMP4peroxisomal membraneAK297018.10.000581
protein 4, 24 kDa
11726318_s_atEEF1Geukaryotic translationNM_001404.40.000583
elongation factor 1
gamma
11720184_x_atEEF1B2eukaryotic translationNM_001959.30.000595
elongation factor 1 beta 2
11746149_x_atBCHEbutyrylcholinesteraseM16474.10.000611
11737762_x_atHSD17B4hydroxysteroid (17-beta)NM_000414.20.000646
dehydrogenase 4
11739725_a_atTC2Ntandem C2 domains,NM_001128595.10.000648
nuclear
11754918_s_atHMGCS13-hydroxy-3-AK095492.10.000648
methylglutaryl-CoA
synthase 1 (soluble)
11741799_a_atBCORBCL6 corepressorAF317391.10.000649
11736831_a_atSEC23BSec23 homolog B (S.NM_032986.30.000656
cerevisiae )
11744777_s_atDPY30dpy-30 homolog ( C.BC015970.10.000676
elegans )
11754418_s_atG3BP1GTPase activating proteinAK130003.10.000682
(SH3 domain) binding
protein 1
11723250_a_atEML2echinoderm microtubuleNM_012155.10.00072
associated protein like 2
11752369_a_atIMPDH2IMP (inosine 5′-AK293397.10.000726
monophosphate)
dehydrogenase 2
11729643_s_atTPD52tumor protein D52CB2191280.000732
11755057_s_atATP2C1ATPase, Ca++AB037768.10.000739
transporting, type 2C,
member 1
11716946_s_atTM9SF3transmembrane 9AF269150.10.000773
superfamily member 3
11756300_a_atANP326acidic (leucine-rich)BX4325460.000781
nuclear phosphoprotein
32 family, member B
11716134_a_atMTORmechanistic target ofNM_004958.30.000785
rapamycin
(serine/threonine kinase)
11755203_x_atRPL21ribosomal protein L21BX647669.10.000869
11730938_x_atPYCR1pyrroline-5-carboxylateNM_153824.10.000877
reductase 1
11750545_a_atCNOT7CCR4-NOT transcriptionBC007315.20.000884
complex, subunit 7
11727826_a_atC2orf56chromosome 2 openBC004548.20.00093
reading frame 56
11718344_a_atCNOT7CCR4-NOT transcriptionNM_013354.50.000947
complex, subunit 7
11756600_a_atTPD52tumor protein D52AK308983.10.000999
11734619_x_atALOX156arachidonate 15-NM_001141.20.001036
lipoxygenase, type B
11715621_atUFC1ubiquitin-fold modifierNM_016406.30.001145
conjugating enzyme 1
11715958_s_atRPL7ribosomal protein L7NM_000971.30.001233
11748713_a_atASPMasp (abnormal spindle)AY971957.10.001256
homolog, microcephaly
associated (Drosophila)
11758707_s_atC5orf25chromosome 5 openDB5263160.001417
reading frame 25
200081_PM_s_atRPS6ribosomal protein S6BE7417540.00144
11726299_x_atLGALS8lectin, galactoside-AF342815.10.001452
binding, soluble, 8
11756210_a_atRCL1RNA terminal phosphateAL5827810.001477
cyclase-like 1
11743604_s_atRRM1ribonucleotide reductaseBE6188150.001487
M1
11729641_a_atTPD52tumor protein D52BG3890150.001493
11718461_atSLC39A11solute carrier family 39NM_139177.30.001532
(metal ion transporter),
member 11
11725053_x_atTOP1MTtopoisomerase (DNA) I,NM_052963.10.001534
mitochondrial
11758027_s_atHOOK1hook homolog 1CD2432550.001606
( Drosophila )
11745205_s_atTPD52tumor protein D52BC018117.10.001623
11760342_a_atPPP3CBprotein phosphatase 3,M29550.10.001681
catalytic subunit, beta
isozyme
11725875_atWDR66WD repeat domain 66NM_144668.40.001791
11739308_s_atDLG1discs, large homolog 1BM6819310.001815
( Drosophila )
11719666_a_atSTMN1stathmin 1BC082228.10.001852
11752283_a_atALOX15Barachidonate 15-AK298095.10.001904
lipoxygenase, type B
11723312_a_atPXMP2peroxisomal membraneNM_018663.10.001916
protein 2, 22 kDa
11719667_s_atSTMN1stathmin 1BC082228.10.001961
11728791_atTHRSPthyroid hormoneNM_003251.20.001966
responsive
11734917_a_atMETTL4methyltransferase like 4BQ0098020.001983
11717236_x_atRPS7ribosomal protein S7NM_001011.30.002022
11754132_x_atCOMTcatechol-0-BT007125.10.002101
methyltransferase
11743372_s_atPTGES3prostaglandin E synthaseCR611609.10.002174
3 (cytosolic)
11730411_a_atPXMP4peroxisomal membraneBF0576490.002209
protein 4, 24 kDa
200063_PM_s_atNPM1nucleophosminBC002398.10.002233
(nucleolar
phosphoprotein B23,
numatrin)
11722642_a_atDGAT2diacylglycerol 0-BC015234.10.002305
acyltransferase 2
11752550_x_atCCT8chaperonin containingAK293705.10.002336
TCP1, subunit 8 (theta)
11758217_s_atFAM108C1family with sequenceCB9972000.002358
similarity 108, member
C1
11717182_a_atPDS5APDS5, regulator ofNM_001100399.10.002387
cohesion maintenance,
homolog A ( S. cerevisiae )
11717153_a_atC20orf3chromosome 20 openNM_020531.20.002394
reading frame 3
11742779_a_atHIBCH3-hydroxyisobutyryl-CoAU66669.10.002431
hydrolase
11744264_a_atSEC11CSEC11 homolog C ( S.AI8161800.002433
cerevisiae )
11753788_x_atCDKN3cyclin-dependent kinaseAF213040.10.002434
inhibitor 3
11758709_s_atRDH11retinol dehydrogenase 11A19721570.002449
(all-trans/9-cis/11-cis)
11727320_atIGFL2IGF-like family member 2NM_001002915.20.002476
11730803_a_atPRPF38BPRP38 pre-mRNANM_018061.20.002515
processing factor 38
(yeast) domain
containing B
11753740_x_atCYB5Acytochrome b5 type ACR456990.10.002572
(microsomal)
11718246_a_atKIAA0146KIAA0146NM_001080394.10.002609
11720768_atMETTL9methyltransferase like 9NM_016025.30.002613
11755017_a_atCHCHD7coiled-coil-helix-coiled-AK098285.10.002843
coil-helix domain
containing 7
11732128_s_atCCT4chaperonin containingBC106934.10.002855
TCP1, subunit 4 (delta)
11744900_x_atFADS2fatty acid desaturase 2AF108658.10.002865
11715881_a_atDAP3death associated proteinNM_004632.20.002925
3
11756875_x_atCOMMD6COMM domainCR603325.10.002962
containing 6
11756783_a_atTFtransferrinBC045772.10.002967
11723197_atHNRNPA3heterogeneous nuclearBX4343020.003022
ribonucleoprotein A3
11729941_atTMEM56transmembrane proteinNM_152487.20.003035
56
11716813_a_atGATMglycineAK298350.10.003053
amidinotransferase (L-
arginine:glycine
amidinotransferase)
11721242_s_atFDFT1farnesyl-diphosphateNM_004462.30.003125
farnesyltransferase 1
11749786_x_atHNRNPFheterogeneous nuclearAK296696.10.003153
ribonucleoprotein F
11723313_s_atPXMP2peroxisomal membraneNM_018663.10.003162
protein 2, 22 kDa
11727286_a_atZNF323zinc finger protein 323NM_001135215.10.003185
11720813_atINTS10integrator complexNM_018142.20.003216
subunit 10
11749874_a_atOXCT13-oxoacid CoAAK299668.10.003244
transferase 1
11757320_x_atCYB5Acytochrome b5 type AAA7067400.003263
(microsomal)
11733591_a_atC1orf204chromosome 1 openNM_001134233.10.003297
reading frame 204
11718135_atPRPS2phosphoribosylNM_001039091.10.003316
pyrophosphate
synthetase 2
11716302_s_atACSL1acyl-CoA synthetase long-NM_001995.20.003359
chain family member 1
11744392_a_atPAPOLApoly(A) polymerase alphaBC000927.10.003388
11741012_a_atSC4MOLsterol-C4-methyl oxidase-AK292418.10.00342
like
synovial sarcoma
translocation,
11722800_a_atSS18chromosome 18CB2410090.003458
11755439_x_atUBAC2UBA domain containing 2BC053346.10.003608
11756674_s_atSTRBPspermatid perinuclearCR596677.10.003641
RNA binding protein
TABLE 21 — Type I Epidermis vs N-D
Gene Ontology Biological Process TermsUpDownDirectional
GO:0002764 immune response-regulating**
signaling pathway
GO:0002758 innate immune response-activating***
signal transduction
GO:0002224 toll-like receptor signaling pathway**
GO:0048468 cell development**
GO:0002376 immune system process****
GO:0002252 immune effector process****
GO:0002253 activation of immune response****
GO:0002218 activation of innate immune***
response
GO:0006955 immune response****
GO:0045087 innate immune response****
GO:0071383 cellular response to steroid**
hormone stimulus
GO:0006954 inflammatory response*
GO:0045047 protein targeting to ER****
GO:0032984 macromolecular complex****
disassembly
GO:0016568 chromatin modification*
GO:0050776 regulation of immune response****
GO:0006749 glutathione metabolic process**
GO:0019752 carboxylic acid metabolic process*
GO:0007154 cell communication*
GO:0016042 lipid catabolic process*
GO:0070588 calcium ion transmembrane*
transport
*p-value between 1 × 10 −2 and 1 × 10 −3
**p-value between 1 × 10 −3 and 1 × 10 −4
***p-value between 1 × 10 −4 and 1 × 10 −5
****p-value less than 1 × 10 −5
TABLE 22 — Terms Type II Epidermis vs N-D
Gene Ontology Biological ProcessUpDownDirectional
GO:0042770 signal transduction in****
response to DNA damage
GO:0072331 signal transduction by****
p53 class mediator
GO:0007173 epidermal growth factor**
receptor signaling pathway
GO:0001942 hair follicle development****
GO:0008544 epidermis development****
GO:0045444 fat cell differentiation*
GO:0019882 antigen processing and****
presentation
GO:0071453 cellular response to oxygen**
levels
GO:0071456 cellular response to hypoxia**
GO:0031960 response to corticosteroid*
stimulus
GO:0033554 cellular response to stress****
GO:0006281 DNA repair**
GO:0000077 DNA damage checkpoint****
GO:0006950 response to stress**
GO:0009268 response to pH**
GO:0006886 intracellular protein****
transport
GO:0006605 protein targeting****
GO:0015031 protein transport****
GO:0046907 intracellular transport****
GO:0048193 Golgi vesicle transport**
GO:0006839 mitochondrial transport****
GO:0015986 ATP synthesis coupled***
proton transport
GO:0016568 chromatin modification**
GO:0031326 regulation of cellular**
biosynthetic process
GO:0006521 regulation of cellular amino****
acid metabolic process
GO:0010565 regulation of cellular ketone****
metabolic process
GO:0051171 regulation of nitrogen
compound metabolic process
GO:0051726 regulation of cell cycle**
GO:0045454 cell redox homeostasis**
GO:0032652 regulation of interleukin-1**
production
GO:0035383 thioester metabolic process****
GO:0006637 acyl-CoA metabolic process****
GO:0006099 tricarboxylic acid cycle****
GO:0006635 fatty acid beta-oxidation**
GO:0018108 peptidyl-tyrosine**
phosphorylation
GO:0006082 organic acid metabolic****
process
GO:0006520 cellular amino acid**
metabolic process
GO:0043038 amino acid activation****
GO:0006091 generation of precursor****
metabolites and energy
GO:0006096 glycolysis**
GO:0006119 oxidative phosphorylation****
GO:0042773 ATP synthesis coupled****
electron transport
GO:0045333 cellular respiration****
GO:0007049 cell cycle****
GO:0005975 carbohydrate metabolic***
process
GO:0006007 glucose catabolic process***
GO:0016052 carbohydrate catabolic****
process
GO:0055114 oxidation-reduction process****
TABLE 23 — Type III Epidermis vs N-D
Gene Ontology Biological Process TermsUpDownDirectional
GO:0048731 system development**
GO:0048856 anatomical structure development***
GO:0030154 cell differentiation**
GO:0070482 response to oxygen levels*
GO:0033365 protein localization to organelle**
GO:0045047 protein targeting to ER**
GO:0006605 protein targeting**
GO:0006612 protein targeting to membrane**
GO:0006839 mitochondrial transport**
GO:0001934 positive regulation of protein**
phosphorylation
GO:0051347 positive regulation of transferase**
activity
GO:0010627 regulation of intracellular protein**
kinase cascade
GO:0080135 regulation of cellular response*
to stress
GO:0051320 S phase***
GO:0006414 translational elongation****
GO:0006091 generation of precursor***
metabolites and energy
GO:0006119 oxidative phosphorylation**
GO:0022900 electron transport chain****
GO:0045333 cellular respiration****
GO:0055114 oxidation-reduction process***
TABLE 24 — Type I Dermis vs N-D
Gene Ontology Biological Process TermsUpDownDirectional
GO:0000165 MAPK cascade**
GO:0048011 nerve growth factor receptor*
signaling pathway
GO:0007179 transforming growth factor beta*
receptor signaling pathway
GO:0050877 neurological system process***
GO:0007596 blood coagulation*
GO:0050878 regulation of body fluid levels*
GO:0001944 vasculature development****
GO:0001568 blood vessel development****
GO:0048514 blood vessel morphogenesis****
GO:0001525 angiogenesis****
GO:0030183 B cell differentiation*
GO:0007399 nervous system development****
GO:0022008 neurogenesis***
GO:0048699 generation of neurons***
GO:0030182 neuron differentiation**
GO:0048666 neuron development**
GO:0048870 cell motility**
GO:0043627 response to estrogen stimulus**
GO:0006281 DNA repair****
GO:0001666 response to hypoxia*
GO:0006979 response to oxidative stress*
GO:0009611 response to wounding***
GO:0070482 response to oxygen levels**
GO:0033365 protein localization to organelle****
GO:0045047 protein targeting to ER****
GO:0006605 protein targeting****
GO:0015031 protein transport****
GO:0046907 intracellular transport****
GO:0034330 cell junction organization**
GO:0030198 extracellular matrix organization*
GO:0007010 cytoskeleton organization*
GO:0051276 chromosome organization***
GO:0032200 telomere organization**
GO:0006338 chromatin remodeling*
GO:0043408 regulation of MAPK cascade***
GO:0051924 regulation of calcium ion transport*
GO:0010827 regulation of glucose transport***
GO:0030334 regulation of cell migration****
GO:0010564 regulation of cell cycle process**
GO:0010646 regulation of cell communication****
GO:0022402 cell cycle process**
GO:0022403 cell cycle phase***
GO:0007049 cell cycle**
GO:0000278 mitotic cell cycle****
GO:0007154 cell communication****
GO:0008202 steroid metabolic process*
GO:0006694 steroid biosynthetic process**
GO:0016126 sterol biosynthetic process****
GO:0006695 cholesterol biosynthetic process****
GO:0061061 muscle structure development*
TABLE 25 — Type II Dermis vs. N-D
Gene Ontology Biological Process TermsUpDownDirectional
GO:0019226 transmission of nerve impulse*
GO:0050877 neurological system process**
GO:0007399 nervous system development**
GO:0022008 neurogenesis****
GO:0048699 generation of neurons***
GO:0030182 neuron differentiation***
GO:0048666 neuron development***
GO:0031175 neuron projection development**
GO:0007409 axonogenesis**
GO:0048667 cell morphogenesis involved in**
neuron differentiation
GO:0048468 cell development***
GO:0006281 DNA repair****
GO:0033365 protein localization to organelle****
GO:0070972 protein localization to endoplasmic****
reticulum
GO:0006605 protein targeting****
GO:0006612 protein targeting to membrane****
GO:0015031 protein transport****
GO:0006810 transport****
GO:0051641 cellular localization****
GO:0016043 cellular component organization****
GO:0022411 cellular component disassembly****
GO:0030198 extracellular matrix organization*
GO:0032984 macromolecular complex****
disassembly
GO:0043624 cellular protein complex****
disassembly
GO:0071156 regulation of cell cycle arrest**
GO:0010646 regulation of cell communication*
GO:0051320 S phase**
GO:0044248 cellular catabolic process****
GO:0006457 protein folding**
GO:0007049 cell cycle*
GO:0000278 mitotic cell cycle**
GO:0007154 cell communication*
GO:0006694 steroid biosynthetic process**
GO:0006695 cholesterol biosynthetic process***
TABLE 26 — Type III Dermis vs. N-D
Gene Ontology Biological Process TermsUpDownDirectional
GO:0007155 cell adhesion**
GO:0019226 transmission of nerve impulse*
GO:0051403 stress-activated MAPK cascade***
GO:0007254 JNK cascade**
GO:0000165 MAPK cascade****
GO:0016055 Wnt receptor signaling pathway*
GO:0050877 neurological system process**
GO:0001944 vasculature development***
GO:0001568 blood vessel development**
GO:0048514 blood vessel morphogenesis**
GO:0022008 neurogenesis**
GO:0030182 neuron differentiation**
GO:0048666 neuron development**
GO:0061061 muscle structure development**
GO:0042692 muscle cell differentiation**
GO:0048646 anatomical structure formation****
involved in morphogenesis
GO:0033554 cellular response to stress*
GO:0006281 DNA repair****
GO:0001666 response to hypoxia**
GO:0070482 response to oxygen levels***
GO:0036293 response to decreased oxygen levels**
GO:0034613 cellular protein localization****
GO:0033365 protein localization to organelle****
GO:0070972 protein localization to endoplasmic****
reticulum
GO:0045047 protein targeting to ER****
GO:0006886 intracellular protein transport****
GO:0006605 protein targeting****
GO:0006612 protein targeting to membrane****
GO:0015031 protein transport****
GO:0006811 ion transport***
GO:0006812 cation transport**
GO:0030001 metal ion transport**
GO:0050000 chromosome localization****
GO:0022411 cellular component disassembly****
GO:0034330 cell junction organization*
GO:0034622 cellular macromolecular complex****
assembly
GO:0007010 cytoskeleton organization**
GO:0000226 microtubule cytoskeleton**
organization
GO:0070925 organelle assembly****
GO:0051276 chromosome organization***
GO:0032200 telomere organization***
GO:0000819 sister chromatid segregation****
GO:0043408 regulation of MAPK cascade****
GO:0010646 regulation of cell communication****
GO:0019725 cellular homeostasis*
GO:0022402 cell cycle process****
GO:0035383 thioester metabolic process**
GO:0071616 acyl-CoA biosynthetic process**
GO:0035337 fatty-acyl-CoA metabolic process***
GO:0044248 cellular catabolic process****
GO:0046394 carboxylic acid biosynthetic process***
GO:0044255 cellular lipid metabolic process*
GO:0006631 fatty acid metabolic process**
GO:0019752 carboxylic acid metabolic process****
GO:0007049 cell cycle****
GO:0007154 cell communication***
GO:0005975 carbohydrate metabolic process**
GO:0006694 steroid biosynthetic process**
GO:0006695 cholesterol biosynthetic process****
GO:0008610 lipid biosynthetic process**
GO:0055114 oxidation-reduction process**

Claims as granted

3 claims

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Classifications

3 codes
IPC · International Patent Classification
Section A — Human necessities
  • A61B5/103
  • A61B10/02
  • A61B5/00

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File wrapper

⤢ drag to zoomJan 2014Jul 2014Jan 2015Jul 2015Jan 2016Jul 2016Jan 2017Jul 2017Jan 2018Jul 2018Jan 2019Jul 2019USPTOApplicantRestriction requirementResponse after non-finalNon-final rejectionFinal rejectionNotice of allowance
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Pendency
5.5 y
2,003 days filing → grant
Office actions
4
after a restriction
Responses
2
no RCE
Appeals
2
notices of appeal
Examiner
Channing S Mahatan
art unit 1636 · TC 1600
Citations: 66 back · 2 forward

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Chain of title

⤢ drag to zoom20142016201820202022202420262028203020322034Owner 1
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