USPatent applicationPatented

Compounds for the treatment of hepatitis C

Granted 23 Dec 2014 · 1 office action

Assignee: Bristol Myers Squibb

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Inventors: Tao Wang, Zhongxing Zhang, Zhiwei Yin, Qian Zhao +1 · Examiner: Venkataraman Balasubramanian · AU 1624 · TC 1600

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Abstract

The disclosure provides compounds of formula I, including pharmaceutically acceptable salts, as well as compositions and methods of using the compounds. The compounds have activity against hepatitis C virus (HCV) and may be useful in treating those infected with HCV. [structure]

Description

29 parts
›CROSS-REFERENCE TO RELATED APPLICATIONS

This application claims the benefit of U.S. Provisional Application Ser. No. 61/595,239 filed Feb. 6, 2012.

›BACKGROUND OF THE INVENTION · 1 of 2

The disclosure generally relates to the novel compounds of formula I including pharmaceutically acceptable salts, which have activity against hepatitis C virus (HCV) and are useful in treating those infected with HCV. The disclosure also relates to compositions and methods of using these compounds.

Hepatitis C virus (HCV) chronically infects an estimated 170 million people worldwide, with 3 to 4 million infected individuals in the United States alone (Boyer, N. and Marcellin, P. J. Hepatology. 2000, 32:98-112; Alter, M. J., et al. Engl. J. Med. 1999, 341:556-562). Prior to the mid 1990s, transfusion with infected blood products was the main route of HCV transmission. Following the introduction of blood screening methods, transmission via injection drug use became the primary risk factor. Chronic infection often leads to the development of severe liver complications, including fibrosis, cirrhosis, and hepatocellular carcinoma. HCV infection is also the leading cause of orthotopic liver transplantation in the United States. The degree to which disease progression is related to viral and cellular factors is not completely understood.

Considerable heterogeneity is found within the nucleotide and encoded amino acid sequence of the HCV genome (Simmonds, P. J. Gen. Virology. 2004, 85:3173-3188). Based on this sequence diversity, six major genotypes and multiple associated subtypes have been described. The genotypes of HCV differ in their worldwide distribution, and the clinical significance of the genetic heterogeneity of HCV remains elusive despite numerous studies of the possible effect of genotypes on pathogenesis and therapy.

Medical treatment for HCV is limited by the lack of a vaccine or approved therapies that specifically target the virus. Currently, patients undergo treatment with a combination of parenterally administered pegylated alpha-interferon and oral ribavirin. Genotype 1 HCV is the most difficult to treat and elimination of the virus (sustained virologic response) is achieved for only approximately 50% of patients (Fried, M. W. et al. N. Engl. J. Med. 2002, 347:975-982; Zeumzem, S, Nature Clinical Practice. 2008, 5:610-622). This poor treatment response, combined with often severe side effects induced by therapy, highlight a need for improved antiviral drugs with better efficacy and safety profiles.

HCV is a member of the Flaviviridae family of viruses with a single-stranded positive-sense RNA genome. Following infection of host cells, the 9.6 Kb genome is translated into a polyprotein precursor of approximately 3,000 amino acids (reviewed in Lindenbach, B. D. and Rice, C. M. Nature. 2005, 436:933-938; Moradpour, D, Penin, F., and Rice, C. M. Nature Reviews. 2007, 5:453-463). Post-translational processing by both cellular and viral proteases results in the generation of at least 10 separate viral proteins. The structural proteins (which by definition are found in mature virions) include core, E1, E2, and possibly p7, and originate from the amino-terminal region of the polyprotein. The core protein assembles into the viral nucleocapsid. The E1 and E2 glycoproteins form heterodimers that are found within the lipid envelope surrounding the viral particles, and mediate host cell receptor binding and entry of the virus into cells. It is unclear if p7 is a structural protein, and its role in replication has yet to be defined. However p7 is believed to form an ion channel in cellular membranes, preventing acidification of intracellular compartments in which virions are assembled, and it has been shown to be essential for viral replication and assembly. The nonstructural proteins NS2, NS3, NS4A, NS4B, NS5A, and NS5B are produced through maturational cleavages of the carboxy-terminal region of the polyprotein. NS2 along with the amino terminus of NS3 form the NS2-3 metalloprotease which cleaves at the NS2-NS3 junction. Additionally, NS2 is involved in assembly and egress of nascent virions. The NS3 protein contains both a serine protease in its amino-terminal region, and a nucleotide-dependent RNA helicase in its carboxy-terminal region. NS3 forms a heterodimer with the NS4A protein, constituting the active protease which mediates cleavages of the polyprotein downstream of NS3, both in cis, at the NS3-NS4A cleavage site, and in trans, for the remaining NS4A-NS4B, NS4B-NS5A, NS5A-NS5B sites. The complex formation of the NS3 protein with NS4A seems necessary to the processing events, enhancing the proteolytic efficiency at all of the sites. The NS3 protein also exhibits nucleoside triphosphatase and RNA helicase activities. The NS4B protein has been shown to be important for localization of HCV proteins into replication complexes in altered membranous structures within the cell. NS5B encodes an RNA-dependent RNA polymerase that is involved in the replication of HCV.

Subgenomic HCV replicons, containing the untranslated regions 5′ and 3′ to the coding sequence fused to the nonstructural proteins or the full-length polyprotein, are competent for translation, viral protein expression, and replication within cultured cells (Lohmann, V. et al. Science. 1999, 285:110-113; Moradpour, D, Penin, F., and Rice, C. M. Nature Reviews. 2007, 5:453-463). The replicon system has proven valuable for the identification of inhibitors targeting the nonstructural proteins associated with these functions. However, only limited subsets of HCV genotypes have been used to generate functional replicons.

Other systems have been used to study the biology of the HCV structural proteins that mediate the entry into host cells. For example, virus-like-particles made in recombinant baculovirus-infected cells with the HCV core, E1 and E2 proteins have also been used to study the function of the HCV E1 and E2 proteins (Barth, H., et al. J. Biol. Chem. 2003, 278:41003-41012). In addition, pseudotyping systems where the E1 and E2 glycoproteins are used to functionally replace the glycoproteins of retroviruses have been developed (Bartosch, B., Dubuisson, J. and Cosset, F.-L. J. Exp. Med. 2003, 197:633-642; Hsu, M. et al. Proc. Natl. Acad. Sci. USA. 2003, 100:7271-7276). These systems yield HCV pseudoparticles that bind to and enter host cells in a manner which is believed to be analogous to the natural virus, thus making them a convenient tool to study the viral entry steps as well as to identify inhibitors block this process.

›BACKGROUND OF THE INVENTION · 2 of 2

Recently, a full-length genotype 2a HCV clone, JFH1, was isolated and demonstrated the ability to replicate in vitro. Through repeated passage and adaptation in cell culture increased titers of infectious virus were produced (Lindenbach, B. D., et al. Science. 2005, 309:623-626; Wakita, T. et al. Nature Med. 2005, 11:791-796). In contrast to the HCV replicon or pseudotyping systems, the infectious virus is useful for studying the complete HCV replication cycle, including identifying inhibitors of not only the replication proteins, but those involved in early steps in virus infection (entry and uncoating) and production of progeny viruses (genome packaging, nucleocapsid assembly, virion envelopment and egress).

Triazines have been disclosed. See WO 2009/091388 and US 2009/0286778.

The invention provides technical advantages, for example, the compounds are novel and are effective against hepatitis C. Additionally, the compounds provide advantages for pharmaceutical uses, for example, with regard to one or more of their mechanism of action, binding, inhibition efficacy, target selectivity, solubility, safety profiles, or bioavailability.

›DESCRIPTION OF THE INVENTION · 1 of 8

One aspect of the invention is a compound of formula I

where

R 1 is alkyl, hydroxyalkyl, alkoxyalkyl, haloalkyl, cycloalkyl, hydroxycycloalkyl, alkoxycycloalkyl, halocycloalkyl, cycloalkenyl, indanyl, alkylcarbonyl, or benzyl wherein the benzyl moiety is substituted with 0-3 substituents selected from halo, alkyl, cycloalkyl, alkenyl, alkynyl, hydroxy, cyano, haloalkyl, alkoxy, and haloalkoxy;

R 2 is alkyl, cycloalkyl, (Ar 2 )alkyl, (Ar 2 )cycloalkyl, ((Ar 2 )cycloalkyl)alkyl, ((Ar 2 )alkyl)cycloalkyl, or (((Ar 2 )alkyl)cycloalkyl)alkyl;

R 3 is hydrogen, alkyl or cycloalkyl;

R 4 is hydrogen, alkyl or cycloalkyl;

R 5 is

where ring A is a 4 to 7 membered alkylene ring;

R 5a is alkyl or benzyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, and alkoxy;

R 6 is hydrogen, alkyl or cycloalkyl;

R 7 is hydroxy, alkyloxy, phenoxy, SO 2 R 9 , SO 2 N(R 10 )(R 11 ), CN, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, (cycloalkyl)alkyl, (alkyl)cycloalkyl, ((alkyl))cycloalkyl)alkyl, or bridged bicycloalkyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, ether, cyclicether, benzocyclicether, bicyclicether, CO 2 R 9 , NR 9 CO 2 R 11 , N(R 10 )(R 11 ), CON(R 10 )(R 11 ), NR 9 CON(R 10 )(R 11 ), SO 2 N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, Ar 3 , OAr 3 , NR 13 Ar 3 , N(R 13 )COAr 3 , N(R 13 )COAr 3 , and N(R 13 )SO 2 Ar 3 ;

or R 7 is hydrogen, N-alkoxycarbonylpiperidinyl, piperidinonyl, or Ar 4 ;

R 8 is hydrogen, alkyl, or cycloalkyl, and alkyl or cycloalkyl is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, fused bicyclic alkyl, bridged bicyclic alkyl, spiro bicyclic alkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, CO 2 R 9 , N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, Ar 3 , OAr 3 , NR 13 Ar 3 , N(R 13 )COAr 3 , and N(R 13 )SO 2 Ar 3 ;

or R 8 is substituted with biotin, flurescein or rhosamin;

or R 7 and R 8 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl;

R 9 is hydrogen, Ar 3 , alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, ((hydroxyalkyl)alkoxy)alkoxy, or ((alkoxy)alkoxy)alkoxy;

R 10 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, alkoxycarbonyl, or Ar 6 ;

R 11 is hydrogen, alkyl, cycloalkyl, or Ar 6 ;

or R 10 and R 11 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl;

R 12 is hydrogen, alkyl, cycloalkyl, or Ar 6 ;

R 13 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, alkoxycarbonyl, or Ar 6 , and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkyenyl, haloalkyl, alkoxy, and haloalkoxy, N(R 15 )(R 16 ), and alkylCO;

R 14 is hydrogen, alkyl, cycloalkyl, or Ar 6 ;

or R 13 and R 14 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl;

R 15 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl;

R 16 is hydrogen, alkyl, or cycloalkyl;

or R 15 and R 16 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl;

L is alkylene, cycloalkylene, (cycloalkyl)alkyl, (alkyl)cycloalkyl, or alkyl(cycloalkyl)alkyl, and is substituted with 0-2 substituents selected from alkyl, alkoxy, hydroxy, CO 2 R 12 and CONR 13 R 14 ;

Ar 1 is phenyl substituted with 1 CON(R 5 )(R 6 ) and with 0-3 substituents selected from Ar 3 , hydroxy, halo, alkyl, cycloalkyl, haloalkyl, alkoxy, and haloalkoxy;

Ar 2 is phenyl substituted with 0-3 substituents selected from halo, hydroxy, cyano, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, alkoxy, and haloalkoxy;

Ar 3 is phenyl, biphenyl, terphenyl, naphthalenyl, furanyl, benzofuranyl, fluorenyl, fluorenonyl, thiophenyl, benzothiophenyl, pyrrolyl, indolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzoisothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, indolinyl, chromenonyl, or dibenzofuranyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, Ar 5 , OAr 5 , NR 13 Ar 5 , N(R 13 )COAr 5 , N(R 13 )SO 2 Ar 5 , alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone, sulfamide, and PhCONHSO 2 ; and said alkyl, alkenyl, cycloalkyl, alkynyl or Ar 5 is further substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, aryoxy, alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone, sulfamide, PhCONHSO 2 and Ar 6 ;

›DESCRIPTION OF THE INVENTION · 2 of 8

or Ar 3 is phenyl substituted with 1 substituents selected from benzyl, phenoxy, pyridyloxy, pyrimidyloxy, tetrazolyloxy, thiazolyl, phenylpyrazolyl, methyloxadiazolyl, thiadiazolyl, triazolyl, methyltriazolyl, tetrazolyl, pyridinyl, dimethoxypyrimdinyl, indolyl, indolinyl, and isoindolinyl;

Ar 4 is phenyl, indanyl, tetrahydronaphthyl, isochromanyl, benzodioxolyl, pyridinyl, pyrazolyl, imidazolyl, or triazolyl, and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkyenyl, haloalkyl, alkoxy, and haloalkoxy, N(R 13 )(R 14 ), and alkylCO;

Ar 5 is phenyl, naphthalenyl, furanyl, benzofuranyl, azabenzofuranyl, thiophenyl, benzothiophenyl, azabenzothiophenyl, pyrrolyl, indolyl, azaindolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindazolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, or indolinyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, OAr 6 , NR 13 Ar 6 , alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone and sulfamide;

or Ar 5 is substituted with biotin, flurescein or rhosamin;

Ar 6 is phenyl, naphthalenyl, furanyl, benzofuranyl, azabenzofuranyl, thiophenyl, benzothiophenyl, azabenzothiophenyl, pyrrolyl, indolyl, azaindolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindazolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, or indolinyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, phenyl, hydroxy, alkoxy, aryloxy, alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, ester, ketone, amidine, urea, ketone, sulfone and sulfamide;

or Ar 6 is substituted with biotin, flurescein or rhosamin;

or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where:

R 1 is alkyl, hydroxyalkyl, alkoxyalkyl, haloalkyl, cycloalkyl, hydroxycycloalkyl, alkoxycycloalkyl, halocycloalkyl, cycloalkenyl, indanyl, alkylcarbonyl, or benzyl wherein the benzyl moiety is substituted with 0-3 substituents selected from halo, alkyl, haloalkyl, alkoxy, and haloalkoxy;

R 2 is alkyl, (Ar 2 )alkyl, (Ar 2 )cycloalkyl, ((Ar 2 )cycloalkyl)alkyl, ((Ar 2 )alkyl)cycloalkyl, or (((Ar 2 )alkyl)cycloalkyl)alkyl;

R 3 is hydrogen or alkyl;

R 4 is hydrogen or alkyl;

R 5 is

where ring A is a 4 to 7 membered alkylene ring substituted with L;

R 6 is hydrogen or alkyl;

R 7 is alkyl, cycloalkyl, (cycloalkyl)alkyl, (alkyl)cycloalkyl, ((alkyl))cycloalkyl)alkyl, or a bridged bicycloalkyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, CO 2 R 9 , N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, and Ar 4 ;

or R 7 is hydrogen, N-alkoxycarbonylpiperidinyl, piperidinonyl, or Ar 3 ;

R 8 is hydrogen or alkyl;

or R 7 and R 8 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl;

R 9 is hydrogen, alkyl, hydroxyalkyl, alkoxyalkyl, ((hydroxyalkyl)alkoxy)alkoxy, or ((alkoxy)alkoxy)alkoxy;

R 10 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl;

R 11 is hydrogen, alkyl;

or R 10 and R 11 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl;

R 12 is hydrogen or alkyl;

R 13 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl;

R 14 is hydrogen or alkyl;

or R 13 and R 14 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl;

L is alkylene, cycloalkylene, (cycloalkyl)alkyl, (alkyl)cycloalkyl, or alkyl(cycloalkyl)alkyl, and is substituted with 0-1 CO 2 R 12 or CONR 13 R 14 ;

Ar 1 is phenyl substituted with 1 CON(R 5 )(R 6 ) and with 0-3 substituents selected from halo, alkyl, haloalkyl, alkoxy, and haloalkoxy;

Ar 2 is phenyl substituted with 0-3 substituents selected from halo, alkyl, haloalkyl, alkoxy, and haloalkoxy;

Ar 3 is phenyl, indanyl, fluorenyl, biphenyl, terphenyl, pyridinyl, pyrazolyl, isoxazolyl, imidazolyl, thiazolyl, triazolyl, benzoxazolyl, indolinyl, or dibenzofuranyl, and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkenyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 )))alkyl, phenyl, hydroxy, alkoxy, haloalkoxy, alkylcarbonyl, CO 2 R 12 , CON(R 13 )(R 14 ), or PhCONHSO 2 ;

or Ar 3 is phenyl substituted with 1 substituents selected from benzyl, tetrazolyloxy, thiazolyl, phenylpyrazolyl, methyloxadiazolyl, thiadiazolyl, triazolyl, methyltriazolyl, tetrazolyl, pyridinyl, dimethoxypyrimdinyl; and

Ar 4 is phenyl, indanyl, tetrahydronaphthyl, isochromanyl, benzodioxolyl, pyridinyl, pyrazolyl, or imidazolyl, triazolyl and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkyenyl, haloalkyl, alkoxy, and haloalkoxy, N(R 13 )(R 14 ), and alkylCO;

›DESCRIPTION OF THE INVENTION · 3 of 8

or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 1 is alkyl, hydroxyalkyl, alkoxyalkyl, haloalkyl, cycloalkyl, hydroxycycloalkyl, alkoxycycloalkyl, halocycloalkyl, cycloalkenyl, indanyl, alkylcarbonyl, or benzyl.

Another aspect of the invention is a compound of formula I where R 1 is alkyl, hydroxyalkyl, alkoxyalkyl, haloalkyl, cycloalkyl, hydroxycycloalkyl, alkoxycycloalkyl, halocycloalkyl, cycloalkenyl, benzyl, indanyl, or alkylcarbonyl.

Another aspect of the invention is a compound of formula I where R 2 is alkyl, cycloalkyl, (Ar 2 )alkyl, (Ar 2 )cycloalkyl, ((Ar 2 )cycloalkyl)alkyl, ((Ar 2 )alkyl)cycloalkyl, or (((Ar 2 )alkyl)cycloalkyl)alkyl.

Another aspect of the invention is a compound of formula I where R 2 is alkyl, (Ar 2 )alkyl, (Ar 2 )cycloalkyl, ((Ar 2 )cycloalkyl)alkyl, ((Ar 2 )alkyl)cycloalkyl, or (((Ar 2 )alkyl)cycloalkyl)alkyl.

Another aspect of the invention is a compound of formula I where R 3 is hydrogen, alkyl or cycloalkyl.

Another aspect of the invention is a compound of formula I where R 3 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 3 is hydrogen.

Another aspect of the invention is a compound of formula I where R 4 is hydrogen, alkyl or cycloalkyl.

Another aspect of the invention is a compound of formula I where R 4 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 4 is hydrogen.

Another aspect of the invention is a compound of formula I where R 5 is

where ring A is a 4 to 7 membered alkylene ring substituted with L.

Another aspect of the invention is a compound of formula I where R 5 is

where ring A is a 4 to 7 membered alkylene ring substituted with L.

Another aspect of the invention is a compound of formula I where R 5a is alkyl or benzyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, and alkoxy.

Another aspect of the invention is a compound of formula I where R 6 is hydrogen, alkyl or cycloalkyl.

Another aspect of the invention is a compound of formula I where R 6 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 7 is hydroxy, alkyloxy, phenoxy, SO 2 R 9 , SO 2 N(R 10 )(R 11 ), CN, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, (cycloalkyl)alkyl, (alkyl)cycloalkyl, ((alkyl))cycloalkyl)alkyl, or a bridged bicycloalkyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, ether, cyclicether, benzocyclicether, bicyclicether, CO 2 R 9 , NR 9 CO 2 R 11 , N(R 10 )(R 11 ), CON(R 10 )(R 11 ), NR 9 CON(R 10 )(R 11 ), SO 2 N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, Ar 3 , OAr 3 , NR 13 Ar 3 , N(R 13 )COAr 3 , N(R 13 )COAr 3 , and N(R 13 )SO 2 Ar 3 ;

Another aspect of the invention is a compound of formula I where R 7 is alkyl, cycloalkyl, (cycloalkyl)alkyl, (alkyl)cycloalkyl, ((alkyl))cycloalkyl)alkyl, or a bridged bicycloalkyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, CO 2 R 9 , N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, and Ar 4 .

Another aspect of the invention is a compound of formula I where R 7 is hydrogen, N-alkoxycarbonylpiperidinyl, piperidinonyl, or Ar 4 .

Another aspect of the invention is a compound of formula I where R 7 is hydrogen, N-alkoxycarbonylpiperidinyl, piperidinonyl, or Ar 3 .

Another aspect of the invention is a compound of formula I where R 8 is hydrogen, alkyl or cycloalkyl, and said alkyl or cycloalkyl is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, fused bicyclic alkyl, bridged bicyclic alkyl, spiro bicyclic alkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, CO 2 R 9 , N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, Ar 3 , OAr 3 , NR 13 Ar 3 , N(R 13 )COAr 3 , and N(R 13 )SO 2 Ar 3 .

Another aspect of the invention is a compound of formula I where R 8 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 8 is substituted with biotin, flurescein or rhosamin.

Another aspect of the invention is a compound of formula I where R 7 and R 8 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 7 and R 8 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 9 is hydrogen, Ar 3 , alkyl, cycloalkyl, hydroxyalkyl, alkoxyalkyl, ((hydroxyalkyl)alkoxy)alkoxy, or ((alkoxy)alkoxy)alkoxy.

Another aspect of the invention is a compound of formula I where R 9 is hydrogen, alkyl, hydroxyalkyl, alkoxyalkyl, ((hydroxyalkyl)alkoxy)alkoxy, or ((alkoxy)alkoxy)alkoxy.

Another aspect of the invention is a compound of formula I where R 10 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, alkoxycarbonyl, or Ar 6 .

Another aspect of the invention is a compound of formula I where R 10 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 11 is hydrogen, alkyl, cycloalkyl, or Ar 6 .

Another aspect of the invention is a compound of formula I where R 11 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 10 and R 11 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl.

›DESCRIPTION OF THE INVENTION · 4 of 8

Another aspect of the invention is a compound of formula I where R 10 and R 11 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 12 is hydrogen, alkyl, cycloalkyl, or Ar 6 .

Another aspect of the invention is a compound of formula I where R 12 is hydrogen or alkyl.

Another aspect of the invention is a compound of formula I where R 13 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, alkoxycarbonyl, or Ar 6 and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkyenyl, haloalkyl, alkoxy, haloalkoxy, N(R 15 )(R 16 ), and alkylCO.

Another aspect of the invention is a compound of formula I where R 13 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 14 is hydrogen, alkyl, cycloalkyl, or Ar 6 .

Another aspect of the invention is a compound of formula I where R 14 is hydrogen or alkyl;

Another aspect of the invention is a compound of formula I where R 13 and R 14 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 13 and R 14 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, or morpholinyl, and is substituted with 0-2 substituents selected from alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 15 is hydrogen, alkyl, cycloalkyl, alkylcarbonyl, or alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where R 16 is hydrogen, alkyl or cycloalkyl.

Another aspect of the invention is a compound of formula I where R 15 and R 16 taken together with the nitrogen to which they are attached is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, morpholinyl, thiomorpholinyl, thiomorpholine 1,1-dioxide, tetrahydroquinolinyl, tetrahydroisoquinolinyl, indolinyl, or isoindolinyl, and is substituted with 0-2 substituents selected from alkyl, (aryl)alkyl, alkylcarbonyl, and alkoxycarbonyl.

Another aspect of the invention is a compound of formula I where L is alkylene, cycloalkylene, (cycloalkyl)alkyl, (alkyl)cycloalkyl, or alkyl(cycloalkyl)alkyl, and is substituted with 0-2 substituents selected from alkyl, alkoxy, hydroxy, CO 2 R 12 or CONR 13 R 14 .

Another aspect of the invention is a compound of formula I where L is alkylene, cycloalkylene, (cycloalkyl)alkyl, (alkyl)cycloalkyl, or alkyl(cycloalkyl)alkyl, and is substituted with 0-1 CO 2 R 12 or CONR 13 R 14 .

Another aspect of the invention is a compound of formula I where Ar 1 is phenyl substituted with 1 CON(R 5 )(R 6 ) and with 0-3 substituents selected from Ar 3 , hydroxy, halo, alkyl, cycloalkyl, haloalkyl, alkoxy, and haloalkoxy.

Another aspect of the invention is a compound of formula I where Ar 2 is phenyl substituted with 0-3 substituents selected from halo, alkyl, haloalkyl, alkoxy, and haloalkoxy.

Another aspect of the invention is a compound of formula I where Ar 1 is fluorophenyl substituted with 1 CON(R 5 )(R 6 ) and with 0-3 substituents selected from Ar 3 , hydroxy, halo, alkyl, cycloalkyl, haloalkyl, alkoxy, and haloalkoxy.

Another aspect of the invention is a compound of formula I where Ar 2 is phenyl substituted with 0-3 substituents selected from halo, hydroxy, cyano, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, alkoxy, and haloalkoxy.

Another aspect of the invention is a compound of formula I where Ar 2 is phenyl substituted with 0-3 substituents selected from halo, alkyl, haloalkyl, alkoxy, and haloalkoxy.

Another aspect of the invention is a compound of formula I where Ar 3 is phenyl, biphenyl, terphenyl, naphthalenyl, furanyl, benzofuranyl, fluorenyl, fluorenonyl, thiophenyl, benzothiophenyl, pyrrolyl, indolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzoisothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, indolinyl, chromenonyl, or dibenzofuranyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, Ar 5 , OAr 5 , NR 13 , Ar 5 , N(R 13 )COAr 5 , N(R 13 )SO 2 Ar 5 , alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone, sulfamide, and PhCONHSO 2 ; and said alkyl, alkenyl, cycloalkyl, alkynyl or Ar 5 is further substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, aryoxy, alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone, sulfamide, PhCONHSO 2 and Ar 6 .

Another aspect of the invention is a compound of formula I where Ar 3 is phenyl, indanyl, fluorenyl, biphenyl, terphenyl, pyridinyl, pyrazolyl, isoxazolyl, imidazolyl, thiazolyl, triazolyl, benzoxazolyl, indolinyl, or dibenzofuranyl, and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkenyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, haloalkoxy, alkylcarbonyl, CO 2 R 12 , CON(R 13 )(R 14 ), or PhCONHSO 2 .

›DESCRIPTION OF THE INVENTION · 5 of 8

Another aspect of the invention is a compound of formula I where Ar 3 is phenyl substituted with 1 substituents selected from benzyl, phenoxy, pyridyloxy, pyrimidyloxy, tetrazolyloxy, thiazolyl, phenylpyrazolyl, methyloxadiazolyl, thiadiazolyl, triazolyl, methyltriazolyl, tetrazolyl, pyridinyl, dimethoxypyrimdinyl, indolyl, indolinyl, and isoindolinyl.

Another aspect of the invention is a compound of formula I where Ar 3 is phenyl substituted with 1 substituents selected from benzyl, tetrazolyloxy, thiazolyl, phenylpyrazolyl, methyloxadiazolyl, thiadiazolyl, triazolyl, methyltriazolyl, tetrazolyl, pyridinyl, and dimethoxypyrimdinyl.

Another aspect of the invention is a compound of formula I where Ar 4 is phenyl, indanyl, tetrahydronaphthyl, isochromanyl, benzodioxolyl, pyridinyl, pyrazolyl, imidazolyl, or triazolyl, and is substituted with 0-3 substituents selected from cyano, halo, alkyl, alkyenyl, haloalkyl, alkoxy, and haloalkoxy, N(R 13 )(R 14 ), and alkylCO.

Another aspect of the invention is a compound of formula I where Ar 5 is phenyl, naphthalenyl, furanyl, benzofuranyl, azabenzofuranyl, thiophenyl, benzothiophenyl, azabenzothiophenyl, pyrrolyl, indolyl, azaindolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindazolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, or indolinyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, (CO 2 R 12 )alkyl, (CO 2 R 12 )alkenyl, (CON(R 13 )(R 14 ))alkyl, phenyl, hydroxy, alkoxy, OAr 6 , NR 13 Ar 6 , alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, CO 2 R 12 , COR 12 , SO 2 R 12 , CON(R 13 )(R 14 ), SO 2 N(R 13 )(R 14 ), N(R 13 )(R 14 ), amidine, urea, ketone, sulfone and sulfamide.

Another aspect of the invention is a compound of formula I where Ar 5 is substituted with biotin, flurescein, or rhosamin.

Another aspect of the invention is a compound of formula I where Ar 6 is phenyl, naphthalenyl, furanyl, benzofuranyl, azabenzofuranyl, thiophenyl, benzothiophenyl, azabenzothiophenyl, pyrrolyl, indolyl, azaindolyl, indanyl, pyridinyl, quinolinyl, azaquinolinyl, isoquinolinyl, azaisoquinolinyl, quinoxalinyl, azaquinoxalinyl, pyrimidinyl, quinazolinyl, azaquinazolinyl, pyrazolyl, indazolyl, azaindazolyl, oxazolyl, benzoxazolyl, azabenzoxazolyl, isoxazolyl, benzoisoxazolyl, azabenzoisoxazolyl, imidazolyl, benzoimidazolyl, azabenzoimidazolyl, thiazolyl, benzothiazolyl, azabenzothiazolyl, isothiazolyl, benzoisothiazolyl, azabenzothiazolyl, oxadiazolyl, thiadiazolyl, triazolyl, benzotriazolyl, azabenzotriazolyl, tetrazolyl, or indolinyl, and is substituted with 0-5 substituents selected from cyano, halo, alkyl, cycloalkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, phenyl, hydroxy, alkoxy, aryloxy, alkylthio, haloalkoxy, haloalkylthio, alkylcarbonyl, ester, ketone, amidine, urea, ketone, sulfone and sulfamide

Another aspect of the invention is a compound of formula I where Ar 6 is substituted with biotin, flurescein, or rhosamin;

Another aspect of the invention is a compound of formula I where R 1 is haloalkyl or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 1 is trifluoroethyl or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 1 is alkyl or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 1 is phenylalkyl substituted with 0-5 halo, alkyl, alkenyl, haloalkyl, alkoxy or haloalkoxy or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 1 is benzyl substituted with 0-5 halo, alkyl, alkenyl, haloalkyl, alkoxy or haloalkoxy or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 2 is (Ar 2 )alkyl or (Ar 2 )cycloalkyl, or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 2 is (Ar 2 )alkyl or (Ar 2 )cycloalkyl, or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where R 7 is hydroxy, alkyloxy, phenoxy, SO 2 R 9 , SO 2 N(R 10 )(R 11 ), CN, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, (cycloalkyl)alkyl, (alkyl)cycloalkyl, ((alkyl))cycloalkyl)alkyl, or a bridged bicycloalkyl, and is substituted with 0-4 substituents selected from the group consisting of halo, alkyl, cycloalkyl, benzocycloalkyl, bicyclicalkyl, hydroxyalkyl, alkoxyalkyl, hydroxy, alkoxy, benzyloxy, ether, cyclicether, benzocyclicether, bicyclicether, CO 2 R 9 , NR 9 CO 2 R 11 , N(R 10 )(R 11 ), CON(R 10 )(R 11 ), NR 9 CON(R 10 )(R 11 ), SO 2 N(R 10 )(R 11 ), tetrahydrofuranyl, tetrahydropyranyl, Ar 3 , OAr 3 , NR 13 Ar 3 , N(R 13 )COAr 3 , N(R 13 )COAr 3 , and N(R 13 )SO 2 Ar 3 .

Another aspect of the invention is a compound of formula I where R 7 is Ar 4 or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where L is

or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where Ar 1 is phenyl para-substituted with 1 CON(R 5 )(R 6 ), or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a compound of formula I where Ar 1 is fluoro phenyl para-substituted with 1 CON(R 5 )(R 6 ), or a pharmaceutically acceptable salt thereof.

Any scope of any variable, including R 1 , R 2 , R 3 , R 4 , R 5 , R 5a , R 6 , R 7 , R 8 , R 9 , R 10 , R 11 , R 12 , R 13 , R 14 , R 15 , R 16 , L, Ar 1 , Ar 2 , Ar 3 , Ar 4 , Ar 5 , and Ar 6 can be used independently with the scope of any other instance of a variable.

›DESCRIPTION OF THE INVENTION · 6 of 8

Unless specified otherwise, these terms have the following meanings. “Halo” means fluoro, chloro, bromo, or iodo. “Alkyl” means a straight or branched alkyl group composed of 1 to 6 carbons. “Alkenyl” means a straight or branched alkyl group composed of 2 to 6 carbons with at least one double bond. “Alkynyl” means a straight or branched alkyl group composed of 2 to 6 carbons with at least one triple bond. “Cycloalkyl” means a monocyclic ring system composed of 3 to 8 carbons. “Benzocycloalkyl” means a monocyclic ring system composed of 3 to 8 carbons fused to a benzene ring system. “Bicycloalkyl” means a fused bicyclic ring system wherein each ring is composed of 3 to 7 carbons, that is a [(3-7).0.(3-7)] system. “Bridged bicycloalkyl” means a [(3-7).(1-3).(3-7)] ring system. “Spirocycloalkyl” means a spirocyclic ring system wherein each ring is composed of 3 to 7 carbons. “Alkylene” means a straight or branched divalent alkyl group. “Alkenylene” means a straight or branched divalent alkyl group with at least one double bond. “Cycloalkylene” means a divalent cycloalkane moiety composed of 3 to 7 carbons and includes gem-divalency (for example 1,1-cyclopropanediyl) as well as non-gem-divalency (for example, 1,4-cyclohexanediyl). “Alkylidinyl” means a divalent alkene substituent where the divalency occurs on the same carbon of the alkene. “Hydroxyalkyl,” “alkoxy” and other terms with a substituted alkyl moiety include straight and branched isomers composed of 1 to 6 carbon atoms for the alkyl moiety. “Haloalkyl” and “haloalkoxy” include all halogenated isomers from monohalo substituted alkyl to perhalo substituted alkyl. “Aryl” includes carbocyclic and heterocyclic aromatic substituents. Phenylene is a divalent benzene ring. “1,4-Phenylene” means 1,4-benzenediyl with respect to regiochemistry for the divalent moiety. Parenthetic and multiparenthetic terms are intended to clarify bonding relationships to those skilled in the art. For example, a term such as ((R)alkyl) means an alkyl substituent further substituted with the substituent R.

The substituents described above may be attached at any suitable point of attachment unless otherwise specified. However, it is understood that the compounds encompassed by the present invention are those that are chemically stable as understood by those skilled in the art. Additionally, the compounds encompassed by the present disclosure are those that are suitably stable for use as a pharmaceutical agent.

The invention includes all pharmaceutically acceptable salt forms of the compounds. Pharmaceutically acceptable salts are those in which the counter ions do not contribute significantly to the physiological activity or toxicity of the compounds and as such function as pharmacological equivalents. These salts can be made according to common organic techniques employing commercially available reagents. Some anionic salt forms include acetate, acistrate, besylate, bromide, camsylate, chloride, citrate, fumarate, glucouronate, hydrobromide, hydrochloride, hydroiodide, iodide, lactate, maleate, mesylate, nitrate, pamoate, phosphate, succinate, sulfate, tartrate, tosylate, and xinofoate. Some cationic salt forms include ammonium, aluminum, benzathine, bismuth, calcium, choline, diethylamine, diethanolamine, lithium, magnesium, meglumine, 4-phenylcyclohexylamine, piperazine, potassium, sodium, tromethamine, and zinc.

Some of the compounds of the invention possess asymmetric carbon atoms (see, for example, the structures below). The invention includes all stereoisomeric forms, including enantiomers and diastereomers as well as mixtures of stereoisomers such as racemates. Some stereoisomers can be made using methods known in the art. Stereoisomeric mixtures of the compounds and related intermediates can be separated into individual isomers according to methods commonly known in the art. The use of wedges or hashes in the depictions of molecular structures in the following schemes and tables is intended only to indicate relative stereochemistry, and should not be interpreted as implying absolute stereochemical assignments.

The invention is intended to include all isotopes of atoms occurring in the present compounds. Isotopes include those atoms having the same atomic number but different mass numbers. By way of general example and without limitation, isotopes of hydrogen include deuterium and tritium. Isotopes of carbon include 13 C and 14 C. Isotopically-labeled compounds of the invention can generally be prepared by conventional techniques known to those skilled in the art or by processes analogous to those described herein, using an appropriate isotopically-labeled reagent in place of the non-labeled reagent otherwise employed. Such compounds may have a variety of potential uses, for example as standards and reagents in determining biological activity. In the case of stable isotopes, such compounds may have the potential to favorably modify biological, pharmacological, or pharmacokinetic properties.

Biological Methods

Infection Assays.

HCV pseudoparticles, produced using standardized methodology (Bartosch, B., Dubuisson, J. and Cosset, F.-L. J. Exp. Med. 2003, 197:633-642) were made via a liposome-based transfection procedure of 293T cells with plasmids expressing the murine leukemia virus capsid and polymerase proteins, an MLV genome encoding the luciferase reporter gene, and envelope glycoproteins from either HCV or vesicular stomatitis virus (VSV). The genotype 1a HCV E1 and E2 envelope coding sequences were derived from the H77C isolate (GenBank accession number AF009606). Media containing pseudoparticles was collected 3 days following transfection, filtered, and stored at −20° C. as a viral stock. Infections were performed in 384-well plates by mixing pseudovirus with 1×10 4 Huh7 cells/well in the presence or absence of test inhibitors, followed by incubation at 37° C. Luciferase activity, reflecting the degree of entry of the pseudoparticles into host cells, was measured 2 days after infection. The specificity of the compounds for inhibiting HCV was determined by evaluating inhibition of VSV pseudoparticle infection.

›DESCRIPTION OF THE INVENTION · 7 of 8

Compounds and Data Analysis.

Test compounds were serially diluted 3-fold in dimethyl sulfoxide (DMSO) to give a final concentration range in the assay of 50.0 μM to 0.04 μM. Maximum activity (100% of control) and background were derived from control wells containing DMSO but no inhibitor or from uninfected wells, respectively. The individual signals in each of the compound test wells were then divided by the averaged control values after background subtraction and multiplied by 100% to determine percent activity. Assays were performed in duplicate and average EC 50 values (reflecting the concentration at which 50% inhibition of virus replication was achieved) were calculated. Compound EC 50 data is expressed as A=0.01≦10 nM; B=10-1000 nM. Representative data for compounds are reported in Table 1.

Pharmaceutical Compositions and Methods of Treatment

The compounds demonstrate activity against HCV NS5B and can be useful in treating HCV and HCV infection. Therefore, another aspect of the invention is a composition comprising a compound, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.

Another aspect of the invention is a composition further comprising a compound having anti-HCV activity.

Another aspect of the invention is a composition where the compound having anti-HCV activity is an interferon or a ribavirin. Another aspect of the invention is where the interferon is selected from interferon alpha 2B, pegylated interferon alpha, consensus interferon, interferon alpha 2A, interferon lambda, and lymphoblastoid interferon tau.

Another aspect of the invention is a composition where the compound having anti-HCV activity is a cyclosporin. Another aspect of the invention is where the cyclosporin is cyclosporin A.

Another aspect of the invention is a composition where the compound having anti-HCV activity is selected from the group consisting of interleukin 2, interleukin 6, interleukin 12, a compound that enhances the development of a type 1 helper T cell response, interfering RNA, anti-sense RNA, Imiqimod, ribavirin, an inosine 5′-monophospate dehydrogenase inhibitor, amantadine, and rimantadine.

Another aspect of the invention is a composition where the compound having anti-HCV activity is effective to inhibit the function of a target selected from HCV metalloprotease, HCV serine protease, HCV polymerase, HCV helicase, HCV NS4B protein, HCV entry, HCV assembly, HCV egress, HCV NS5A protein, IMPDH, and a nucleoside analog for the treatment of an HCV infection.

Another aspect of the invention is a composition comprising a compound, or a pharmaceutically acceptable salt thereof, a pharmaceutically acceptable carrier, an interferon and ribavirin.

Another aspect of the invention is a method of inhibiting the function of the HCV replicon comprising contacting the HCV replicon with a compound or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a method of inhibiting the function of the HCV NS5B protein comprising contacting the HCV NS5B protein with a compound or a pharmaceutically acceptable salt thereof.

Another aspect of the invention is a method of treating an HCV infection in a patient comprising administering to the patient a therapeutically effective amount of a compound or a pharmaceutically acceptable salt thereof. In another embodiment the compound is effective to inhibit the function of the HCV replicon. In another embodiment the compound is effective to inhibit the function of the HCV NS5B protein.

Another aspect of the invention is a method of treating an HCV infection in a patient comprising administering to the patient a therapeutically effective amount of a compound, or a pharmaceutically acceptable salt thereof, in conjunction with (prior to, after, or concurrently) another compound having anti-HCV activity.

Another aspect of the invention is the method where the other compound having anti-HCV activity is an interferon or a ribavirin.

Another aspect of the invention is the method where the interferon is selected from interferon alpha 2B, pegylated interferon alpha, consensus interferon, interferon alpha 2A, interferon lambda, and lymphoblastoid interferon tau.

Another aspect of the invention is the method where the other compound having anti-HCV activity is a cyclosporin.

Another aspect of the invention is the method where the cyclosporin is cyclosporin A.

Another aspect of the invention is the method where the other compound having anti-HCV activity is selected from interleukin 2, interleukin 6, interleukin 12, a compound that enhances the development of a type 1 helper T cell response, interfering RNA, anti-sense RNA, Imiqimod, ribavirin, an inosine 5′-monophospate dehydrogenase inhibitor, amantadine, and rimantadine.

Another aspect of the invention is the method where the other compound having anti-HCV activity is effective to inhibit the function of a target selected from the group consisting of HCV metalloprotease, HCV serine protease, HCV polymerase, HCV helicase, HCV NS4B protein, HCV entry, HCV assembly, HCV egress, HCV NS5A protein, IMPDH, and a nucleoside analog for the treatment of an HCV infection.

Another aspect of the invention is the method where the other compound having anti-HCV activity is effective to inhibit the function of target in the HCV life cycle other than the HCV NS5B protein.

“Therapeutically effective” means the amount of agent required to provide a meaningful patient benefit as understood by practitioners in the field of hepatitis and HCV infection.

“Patient” means a person infected with the HCV virus and suitable for therapy as understood by practitioners in the field of hepatitis and HCV infection.

“Treatment,” “therapy,” “regimen,” “HCV infection,” and related terms are used as understood by practitioners in the field of hepatitis and HCV infection.

The compounds of this invention are generally given as pharmaceutical compositions comprised of a therapeutically effective amount of a compound or its pharmaceutically acceptable salt and a pharmaceutically acceptable carrier and may contain conventional excipients. Pharmaceutically acceptable carriers are those conventionally known carriers having acceptable safety profiles. Compositions encompass all common solid and liquid forms including for example capsules, tablets, losenges, and powders as well as liquid suspensions, syrups, elixers, and solutions. Compositions are made using common formulation techniques, and conventional excipients (such as binding and wetting agents) and vehicles (such as water and alcohols) are generally used for compositions. See, for example, Remington's Pharmaceutical Sciences , Mack Publishing Company, Easton, Pa., 17th edition, 1985.

›DESCRIPTION OF THE INVENTION · 8 of 8

Solid compositions are normally formulated in dosage units and compositions providing from about 1 to 1000 mg of the active ingredient per dose are preferred. Some examples of dosages are 1 mg, 10 mg, 100 mg, 250 mg, 500 mg, and 1000 mg. Generally, other agents will be present in a unit range similar to agents of that class used clinically. Typically, this is 0.25-1000 mg/unit.

Liquid compositions are usually in dosage unit ranges. Generally, the liquid composition will be in a unit dosage range of 1-100 mg/mL. Some examples of dosages are 1 mg/mL, 10 mg/mL, 25 mg/mL, 50 mg/mL, and 100 mg/mL. Generally, other agents will be present in a unit range similar to agents of that class used clinically. Typically, this is 1-100 mg/mL.

The invention encompasses all conventional modes of administration; oral and parenteral methods are preferred. Generally, the dosing regimen will be similar to other agents used clinically. Typically, the daily dose will be 1-100 mg/kg body weight daily. Generally, more compound is required orally and less parenterally. The specific dosing regime, however, will be determined by a physician using sound medical judgement.

The invention also encompasses methods where the compound is given in combination therapy. That is, the compound can be used in conjunction with, but separately from, other agents useful in treating hepatitis and HCV infection. In these combination methods, the compound will generally be given in a daily dose of 1-100 mg/kg body weight daily in conjunction with other agents. The other agents generally will be given in the amounts used therapeutically. The specific dosing regime, however, will be determined by a physician using sound medical judgement.

Some examples of compounds suitable for compositions and methods are listed in Table 2.

Synthetic Methods

The compounds may be made by methods known in the art including those described below and including variations within the skill of the art. Some reagents and intermediates are known in the art. Other reagents and intermediates can be made by methods known in the art using readily available materials. The variables (e.g. numbered “R” substituents) used to describe the synthesis of the compounds are intended only to illustrate how to make the compounds and are not to be confused with variables used in the claims or in other sections of the specification. The following methods are for illustrative purposes and are not intended to limit the scope of the invention.

Abbreviations used in the schemes generally follow conventions used in the art. Chemical abbreviations used in the specification and examples are defined as follows: “NaHMDS” for sodium bis(trimethylsilyl)amide; “DMF” for N,N-dimethylformamide; “MeOH” for methanol; “NBS” for N-bromosuccinimide; “Ar” for aryl; “TFA” for trifluoroacetic acid; “LAH” for lithium aluminum hydride; “BOC”, “DMSO” for dimethylsulfoxide; “h” for hours; “rt” for room temperature or retention time (context will dictate); “min” for minutes; “EtOAc” for ethyl acetate; “THF” for tetrahydrofuran; “EDTA” for ethylenediaminetetraacetic acid; “Et 2 O” for diethyl ether; “DMAP” for 4-dimethylaminopyridine; “DCE” for 1,2-dichloroethane; “ACN” for acetonitrile; “DME” for 1,2-dimethoxyethane; “HOBt” for 1-hydroxybenzotriazole hydrate; “DIEA” for diisopropylethylamine, “Nf” for CF 3 (CF 2 ) 3 SO 2 —; and “TMOF” for trimethylorthoformate.

Abbreviations are defined as follows: “1×” for once, “2×” for twice, “3×” for thrice, “° C.” for degrees Celsius, “eq” for equivalent or equivalents, “g” for gram or grams, “mg” for milligram or milligrams, “L” for liter or liters, “mL” for milliliter or milliliters, “μL” for microliter or microliters, “N” for normal, “M” for molar, “mmol” for millimole or millimoles, “min” for minute or minutes, “h” for hour or hours, “rt” for room temperature, “RT” for retention time, “atm” for atmosphere, “psi” for pounds per square inch, “conc.” for concentrate, “sat” or “sat'd” for saturated, “MW” for molecular weight, “mp” for melting point, “ee” for enantiomeric excess, “MS” or “Mass Spec” for mass spectrometry, “ESI” for electrospray ionization mass spectroscopy, “HR” for high resolution, “HRMS” for high resolution mass spectrometry, “LCMS” for liquid chromatography mass spectrometry, “HPLC” for high pressure liquid chromatography, “RP HPLC” for reverse phase HPLC, “TLC” or “tlc” for thin layer chromatography, “NMR” for nuclear magnetic resonance spectroscopy, “ 1 H” for proton, “δ” for delta, “s” for singlet, “d” for doublet, “t” for triplet, “q” for quartet, “m” for multiplet, “br” for broad, “Hz” for hertz, and “α”, “β”, “R”, “S”, “E”, and “Z” are stereochemical designations familiar to one skilled in the art.

LC/MS Method (i.e., Compound Identification).

All Liquid Chromatography (LC) data were recorded on a Shimadzu LC-10AS or LC-20AS liquid chromotograph using a SPD-10AV or SPD-20A UV-Vis detector and Mass Spectrometry (MS) data were determined with a Micromass Platform for LC in electrospray mode.

HPLC Method (i.e., Compound Isolation).

Compounds purified by preparative HPLC were diluted in methanol (1.2 mL) and purified using a Shimadzu LC-8A or LC-10A or Dionex APS-3000 or Waters Acquity™ automated preparative HPLC system.

Syntheses of Intermediates

Preparation of 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoic acid, In-1001

›Step 1

To a solution of 2,4,6-trichloro-1,3,5-triazine (15 g) in THF (300 mL) was added 2,2,2-trifluoroethanol (8.14 g) and Hunig'sBase (15.63 mL). The resulting mixture was stirred for 16 hours. After removal of most THF and precipitate through a plug washing with THF, the filtrate was concentrate to give a crude that will be used as it is.

›Step 2

To a solution of the product in Step 1 above (10 g) in THF (100 mL) was added tert-butyl 4-aminobenzoate (7.79 g) and Hunig'sBase (7.04 mL). The resulting mixture was stirred for 16 h. The precipitate was filtered and washed with Et 2 O, dried, then washed with water and dried to give 10.6 g of tert-butyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoate as a solid.

›Step 3

To a slurry of tert-butyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoate (3.6 g) and 1-(4-chlorophenyl)cyclopropanamine (1.49 g) in THF (50 mL) was stirred for 5 hours at 80° C. The precipitate was filtrated through a plug washing with THF to give acrude product that was purified by Biotage eluting with 4/1-hexane/ethyl acetate to give 1.8 g of tert-butyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoate as a solid.

›Step 4

A solution of above tert-butyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoate (4 g) and HCl in dioxane (7.46 ml, 4M) was stirred for 4 hours. Concentration gave 3.58 g of 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoic acid as a solid.

Preparation of (S)-methyl 3-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate, In-1002

›Step 1

To a solution of 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoic acid (50 mg) in DMF (2 mL) was added O-(benzotriazol-1-yl-N,N,N′,N′-tetramethyluronium tetrafluoroborate (23.82 mg) and (S)-methyl 2-amino-3-(tert-butoxycarbonylamino)propanoate hydrochloride (18.90 mg) and iPr 2 NEt (0.052 ml). After stirring at rt for 4 h, the mixture was purified by preparative HPLC to give (S)-methyl 3-(tert-butoxycarbonylamino)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate.

›Step 2 · 1 of 5

To a solution of (S)-methyl 3-(tert-butoxycarbonylamino)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate (1 g) in CH 2 Cl 2 (10 mL) was added TFA (3 mL). The mixture was stirred at room temperature for 16 hours. All the solvents were removed under vacuum to give (S)-methyl 3-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate (0.8 g).

Preparation of (S)-methyl 4-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)butanoate, In-1003

In-1003 was prepared by using the same procedure of synthesizing In-1002, using (S)-methyl 2-amino-4-(tert-butoxycarbonylamino)butanoate as a starting material.

Preparation of (S)-methyl 5-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)pentanoate

In-1004 was prepared by using the same procedure of synthesizing In-1002, using (S)-methyl 2-amino-5-(tert-butoxycarbonylamino)pentanoate as a starting material.

Preparation of N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamide, In-1005

iPr 2 NEt (0.266 g) and O-benzotriazol-1-yl-N,N,N′,N′-tetra-methyluronium tetrafluoroborate (0.610 g) were added into a solution of 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoic acid (0.760 g) and tert-butyl 3-amino-2,2-dimethylpropylcarbamate (0.352 g) were dissolved in DMF (3 mL). The reaction was stirred at room temperature for 16 hrs before 200 mL of EtOAc was added. The organic phase was washed with water (2×25 mL) and brine (20 mL), dried over MgSO4, and concentrated to give crude product tert-butyl 3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropylcarbamate (0.75 g) which was dissolved in CH 2 Cl 2 (3 mL) and TFA (1.3 mL). After being stirred at room temperature for 16 hours, the mixture was concentrated to give a crude product, N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamide (0.63 g).

Preparation of N-(3-amino-2,2-dimethylpropyl)-4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamide, In-1006

Intermediate In-1006 was prepared by using the same synthetic route of synthesizing In-1005, using methyl 4-amino-2-fluorobenzoate as one of the starting materials.

Synthesis of Compound 1001, (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-ethoxy-2-oxoacetamido)propanoate

To a solution of In-1002 (25 mg) in CH 2 Cl 2 (5 mL) was added ethyl 2-chloro-2-oxoacetate (5.89 mg). The mixture was stirred at room temperature for 4 hours. The reaction was quenched with the MeOH and all the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1001 (5 mg).

Synthesis of Compound 1002, (S)-methyl 3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate

To a solution of 2-amino-2-oxoacetic acid (11.52 mg) and TBTU (41.5 mg) in DMF (2 mL) was added In-1002 (50 mg). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give 1002 (14 mg).

Synthesis of Compound 1003, (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(methylamino)-2-oxoacetamido)propanoate

To a solution of 2-(methylamino)-2-oxoacetic acid (13.33 mg) and TBTU (41.5 mg) in DMF (Volume: 2 mL) was added In-1002 (50 mg). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give 1003 (20 mg).

Synthesis of Compound 1004, (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate

To a solution of 2-(dimethylamino)-2-oxoacetic acid (15.14 mg) and TBTU (41.5 mg) in DMF (2 mL) was added In-1002 (50 mgl). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give 1004 (28 mg).

Synthesis of Compound 1005, (S)-3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoic acid

A suspension of 1002 (14 mg) and K 2 CO 3 (8.92 mg) in acetone-water (1:1, 4 mL) was stirred at room temperature for 16 hours. All the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1005 (12.6 mg).

Synthesis of Compound 1006, (S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(methylamino)-2-oxoacetamido)propanoic acid

A suspension of 1003 (12 mg) and K 2 CO 3 (7.48 mg) in acetone-water (1:1, 4 mL) was stirred at room temperature for 16 hours. All the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1006 (8.4 mg).

Synthesis of Compound 1007, (S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoic acid

A suspension of 1004 (20 mg) and K 2 CO 3 (12.2 mg) in acetone-water (1:1, 4 mL) was stirred at room temperature for 16 hours. All the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1007 (7 mg).

Synthesis of Compound 1008, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropyl)-N2,N2-dimethyloxalamide

iPr 2 NEt (0.037 g) and O-benzotriazol-1-yl-N,N,N′,N′-tetra-methyluronium tetrafluoroborate (0.068 g) was added into the solution of crude In-1005 (0.080 g) and 2-(dimethylamino)-2-oxoacetic acid (0.017 g) in DMF (2 mL). The reaction was stirred at room temperature for 6 hours. All the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1008 (40 mg).

›Step 2 · 2 of 5

Synthesis of Compound 1479, N1-(3-(4-((4-(1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2,2-dimethylpropyl)-N2-(4-fluorophenyl)oxalamide

Compound 1479 was prepared by using the same procedure of synthesizing 1008, using 2-((4-fluorophenyl)amino)-2-oxoacetic acid as one of the starting materials. Its LCMS is shown in a later section.

The following selected examples were prepared by using the same procedure of synthesizing 1479, using the corresponding mono-Boc diamines rather than mono-Boc 2,2-dimethylpropane-1,3-diamine as starting materials:

Synthesis of Compound 1009, (S)-methyl 4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)butanoate

To a solution of In-1003 (50 mg) and 2-(1H-benzo[d][1,2,3]triazol-1-yl)-1,1,3,3-tetramethylisouronium tetrafluoroborate (54 mg) in DMF (1.5 mL) was added 2-amino-2-oxoacetic acid (15 mg). After stirring at room temperature for 4 hours, the mixture was purified by preparative HPLC to give 1009 (23 mg).

Synthesis of Compound 1010, (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(methylamino)-2-oxoacetamido)butanoate

1010 was prepared by using the same procedure of synthesizing 1009, using 2-(methylamino)-2-oxoacetic acid as a starting material.

Synthesis of Compound 1011, (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(dimethylamino)-2-oxoacetamido)butanoate

1011 was prepared by using the same procedure of synthesizing 1009, using 2-(dimethylamino)-2-oxoacetic acid as a starting material.

Synthesis of Compound 1012, (S)-methyl 5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)pentanoate

1012 was prepared by using the same procedure of synthesizing 1009, using In-1004 as a starting material.

Synthesis of Compound 1013, (S)-4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)butanoic acid

A mixture of 1009 (21 mg) and K 2 CO 3 (18 mg) in acetone (2 mL)/water (2 mL) was stirred at room temperature for 16 hours. All the solvents were removed under vacuum. The residue was dissolved in MeOH and purified by preparative HPLC to give 1013 (7.5 mg).

Synthesis of Compound 1014, (S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(methylamino)-2-oxoacetamido)butanoic acid

1014 was prepared by using the same procedure of synthesizing 1013, using 1010 as a starting material.

Synthesis of Compound 1015, (S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(dimethylamino)-2-oxoacetamido)butanoic acid

1015 was prepared by using the same procedure of synthesizing 1013, using 1011 as a starting material.

Synthesis of Compound 1016, (S)-5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)pentanoic acid

1016 was prepared by using the same procedure of synthesizing 1013, using 1012 as a starting material.

Synthesis of Compound 1017, methyl 2-(1-(2-amino-2-oxoacetyl)piperidin-3-yl)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)acetate, and 1018, 2-(1-(2-amino-2-oxoacetyl)piperidin-3-yl)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)acetic acid, and 1019, N-(1-(1-(2-amino-2-oxoacetyl)piperidin-3-yl)-2-oxo-2-(propylamino)ethyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamide

Step 1: To a solution of In-1001 (100 mg) and TBTU (100 mg) in DMF (6 mL) was added tert-butyl 3-(1-amino-2-methoxy-2-oxoethyl)piperidine-1-carboxylate (68.1 mg) and DIPEA (0.146 mL). After stirring at room temperature for 4 hours, the mixture was purified by preparative HPLC to give tert-butyl 3-(1-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2-methoxy-2-oxoethyl)piperidine-1-carboxylate (90 mg).

Step 2: To a solution of tert-butyl 3-(1-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2-methoxy-2-oxoethyl)piperidine-1-carboxylate (85 mg) in DCM (5 mL) was added TFA (0.357 mL). The mixture was stirred at room temperature for 4 hours. All the solvents were removed under vacuum to give methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2-(piperidin-3-yl)acetate (70 mg).

Step 3: To a solution of 2-amino-2-oxoacetic acid (18.26 mg) and TBTU (65.8 mg) in DMF (2 mL) was added methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2-(piperidin-3-yl)acetate (65 mg). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give 1017 (35 mg).

Step 4: A mixture of 1017 (35 mg) and K 2 CO 3 (21 mg) in acetone (4 mL)/water (4.00 mL) was stirred at room temperature for 16 hours. All the solvents were removed under vacuum. The residue was purified by preparative HPLC to give 1018 (28 mg).

Step 5: To a solution of 1018 (15 mg) and TBTU (10.5 mg) in DMF (1.5 mL) was added propan-1-amine (6.42 mg). After stirring at room temperature for 16 hours, the mixture was diluted with water (200 mL) and extracted with EtOAc (2×300 mL). The organic layers were combined, washed with water (200 mL), brine (200 mL), dried over MgSO 4 and concentrated. The residue was purified by silica gel column to give 1019 (1.1 mg).

Synthesis of Compound 1020, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate

›Step 2 · 3 of 5

Step 1: A mixture of In-1002 (70 mg), K 2 CO 3 (33.4 mg) and ethanol (2 mL) was stirred at room temperature for three days. The mixture was acidified by 1N HCl, diluted by MeOH and purified by preparative HPLC to give In-1101 (30 mg).

Step 2: To a solution of 2-(dimethylamino)-2-oxoacetic acid (7.6 mg) and TBTU (20.9 mg) in DMF (1 mL) was added In-1101 (30 mg) and DIPEA (0.03 mL). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give 1020 (15.0 mg).

Synthesis of Compound 1021, (S)-isopropyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate

1021 was prepared by using the same procedure of synthesizing 1020, using iPrOH as a starting material.

Synthesis of Compound 1022, (S)-2-morpholinoethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate

1022 was prepared by using the same procedure of synthesizing 1020, using 2-morpholinoethanol as a starting material.

Synthesis of Compound 1023, (S)-2-(2-hydroxyethoxy)ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate

1023 was prepared by using the same procedure of synthesizing 1020, using 2-morpholinoethanol as a starting material.

Synthesis of Compound 1024, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-(methylamino)-2-oxoacetamido)propanoate

1024 was prepared by using the same procedure of synthesizing 1020, using 2-(methylamino)-2-oxoacetic acid as a starting material.

Synthesis of Compound 1025, (S)-ethyl 3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate

1025 was prepared by using the same procedure of synthesizing 1020, using 2-amino-2-oxoacetic acid as a starting material.

Synthesis of Compound 1552, N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2,2-dimethylpropyl)oxalamide

1552 was prepared by using the same procedure of synthesizing 1025, using In-1005 instead of In-1101.

Synthesis of Compound 1026, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(dimethylamino)-2-oxoacetamido)butanoate

To a solution of 1011 (20 mg) in ethanol (2 mL) was added K 2 CO 3 (20 mg). The mixture was stirred at room temperature for 2 days and then purified by preparative HPLC to give 1026 (5.2 mg).

Synthesis of Compound 1027, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-(methylamino)-2-oxoacetamido)butanoate

1027 was prepared by using the same procedure of synthesizing 1026, using 1010 as a starting material.

Synthesis of Compound 1028, (S)-ethyl 4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)butanoate

1028 was prepared by using the same procedure of synthesizing 1026, using 1009 as a starting material.

Synthesis of Compound 1029, (S)-ethyl 5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)pentanoate

1029 was prepared by using the same procedure of synthesizing 1026, using 1012 as a starting material.

Synthesis of Compound 1030, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5-(2-(methylamino)-2-oxoacetamido)pentanoate

Step 1: To a solution of 2-(methylamino)-2-oxoacetic acid (16.1 mg) and TBTU (50.1 mg) in DMF (1 mL) was added In-1004 (100 mg) and DIPEA (0.15 mL). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5-(2-(methylamino)-2-oxoacetamido)pentanoate (58 mg).

Step 2: 1030 was prepared by using the same procedure of synthesizing 1026, using (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5-(2-(methylamino)-2-oxoacetamido)pentanoate as a starting material.

Synthesis of Compound 1031, (S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5-(2-(dimethylamino)-2-oxoacetamido)pentanoate

Step 1: To a solution of 2-(dimethylamino)-2-oxoacetic acid (18.3 mg) and TBTU (50 mg) in DMF (1 mL) was added In-1004 (100 mg) and DIPEA (0.15 mL). After stirring at room temperature for 2 hours, the mixture was purified by preparative HPLC to give (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-5-(2-(dimethylamino)-2-oxoacetamido)pentanoate (48 mg).

Step 2: 1031 was prepared by using the same procedure of synthesizing 1026, using (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-5-(2-(dimethylamino)-2-oxoacetamido)pentanoate as a starting material.

Synthesis of Compound 1032, cyclopropylmethyl 2-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropylamino)-2-oxoacetate

A mixture of In-1005 (50 mg) and diphenyl oxalate (100 mg) in THF (5 mL) was stirred at room temperature for 16 hours, before cyclopropylmethanamine hydrochloride (191 mg) and iPr2NEt (0.5 mL) were added. The reaction was carried out at room temperature for 4 hours. Removal of solvents gave a residue which was purified by preparative HPLC to offer 1032 (20.7 mg).

Synthesis of Compound 1033, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropyl)-N2-cycloheptyloxalamide

›Step 2 · 4 of 5

1033 was prepared by using the same procedure of synthesizing 1032, using cycloheptanamine as a starting material.

Synthesis of Compound 1034, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropyl)-N2-(2,4-difluorobenzyl)oxalamide

1034 was prepared by using the same procedure of synthesizing 1032, using (2,4-difluorophenyl)methanamine as a starting material.

Synthesis of Compound 1035, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropyl)-N2-phenyloxalamide

1035 was prepared by using the same procedure of synthesizing 1032, using aniline as a starting material.

Synthesis of Compound 1036, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2,2-dimethylpropyl)-N2-(1-(pyrrolidin-1-ylmethyl)cyclopropyl)methyl)oxalamide

1036 was prepared by using the same procedure of synthesizing 1032, using (1-(pyrrolidin-1-ylmethyl)cyclopropyl)methanamine as a starting material.

The following selected examples were prepared by using the same procedure of synthesizing 1032, using the corresponding amines rather than cyclopropylmethanamine hydrochloride as starting materials:

Preparation of 1465, N 1 -(2-((4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)methyl)cyclopentyl)-N 2 -(4-fluorophenyl)oxalamide

iPr 2 NEt (0.2 mL) and 4-fluoroaniline (39.2 mg) added into the solution of ethyl 2-((2-((4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)methyl)cyclopentyl)amino)-2-oxoacetate (40 mg) in EtOH (2 mL) and the reaction was stirred at 155° C. for 3 days. The product was isolated by preparative HPLC system.

Preparation of 1492, N 1 -((1-((4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)methyl)cyclopropyl)methyl)-N 2 -(4-fluorophenyl)oxalamide

To a solution of 2-(((1-((4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)methyl)cyclopropyl)methyl)amino)-2-oxoacetic acid (17 mg) and TBTU (10.33 mg) in DMF (2 mL) was added 4-fluoroaniline (3.58 mg). The mixture was stirred at room temperature for 16 hours, before being purified by preparative HPLC.

Preparation of 3388, N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)oxalamide

To a solution of 4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzoic acid (10 mg) and TBTU (7.74 mg) in DMF (1 mL) was added N 1 -(3-amino-2,2-dimethylpropyl)oxalamide (4.18 mg) and DIPEA (0.018 mL). The mixture was stirred at room temperature for 2 hours. The product was isolated by using preparative HPLC system.

The following selected examples were prepared by using the same synthetic route of synthesizing 3388, using the corresponding substituted alkyl 4-aminobenzoates rather than methyl 4-amino-2-fluorobenzoate or substituted benzamines rather than 1-(4-chlorophenyl)cyclopropanamine as starting materials:

The following selected examples were prepared by using the same synthetic route of synthesizing 1032, using In-1006 rather than In-1005 as one of the starting materials, alone with the corresponding amines or their salts instead of cyclopropylmethanamine hydrochloride:

General Procedure for Parallel Synthesis of Oxalamides

Method 1 and Method 2

Method 1:

A 0.08 M stock solution of the (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-4-(2-ethoxy-2-oxoacetamido)butanoate in DMF was prepared and DIPEA (5.0 eq) was charged in. To each of the amines (15 eq) weighed into 16×100 mm threaded vials was added 1000 μLs of the (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-3-(2-ethoxy-2-oxoacetamido)propanoate/DIPEA solution. The reactions were agitated at 350 rpm on an Innova platform shaker at room temperature for 48 hours. Mixtures were transferred to a 96 well filter plate collecting into a 96 well deep-well plate. Each reaction vial was rinsed with 500 μLs of DMF and rinses were transferred to the appropriate wells of the filter plate. The desired products were isolated by preparative HPLC.

Method 2:

A 0.08 M stock solution of the (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-4-(2-ethoxy-2-oxoacetamido)butanoate in NMP was prepared and DIPEA (5.0 eq) was charged in. To each of the amines (15 eq) weighed into 16×100 mm threaded vials was added 1000 μLs of the (S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-3-(2-ethoxy-2-oxoacetamido)propanoate/DIPEA solution. The reactions were agitated at 350 rpm on an Innova platform shaker at room temperature for 48 hours. Samples were blown down using a Zymark tabletop dryer at 30° C. for 3 hours. A 1.8M solution of potassium carbonate in water was prepared. To each of the reaction vials was added 0.5 mL of acetone followed by 0.5 mls of the potassium carbonate solution. Vials were capped and agitated at 350 rpm on an Innova platform shaker at room temperature for 72 hours. Samples were blown down using a Zymark tabletop dryer at 30° C. for 3 hours before redissolving in 1 mL DMF each. Mixtures were transferred to a 96 well filter plate collecting into a 96 well deep-well plate. Reaction vials were rinsed with 500 μLs of DMF each and rinses were transferred to the appropriate wells of the filter plate. The desired products were isolated by preparative HPLC.

Analytical Methods

A:

Column. Supelco Ascentis Express C18, 4.6×50 mm, 2.7-μm particles; Mobile

Phase A: 5:95 acetonitrile:water with 10 mM ammonium acetate; Mobile Phase B: 95:5 acetonitrile:water with 10 mM ammonium acetate; Temperature: 40° C.;

›Step 2 · 5 of 5

Gradient: 0-100% B over 8 minutes, then a 1-minute hold at 100% B, then 100-0% B over 1 minute; Flow: 1 mL/min.

B:

Column: Waters Sunfire C18, 4.6×100 mm, 3.5-μm particles; Mobile Phase A: water with 0.1% TFA; Mobile Phase B: acetonitrile:water with 0.1% TFA;

Temperature: 40° C.; Gradient: 10-95% B over 6 minutes, then a 2-minute hold at 95% B, then 95-10% B over 0.50 minutes, then a 1.5 minute hold at 10% B; Flow: 1.2 mL/min.

C:

Column. Waters BEH C18, 2.1×50 mm, 1.7-μm particles; Mobile Phase A: 5:95 acetonitrile:water with 10 mM ammonium acetate; Mobile Phase B: 95:5 acetonitrile:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient: 0.5 min hold at 0% B, 0-100% B over 4 minutes, then a 0.5-minute hold at 100% B;

Flow: 1 mL/min.

D:

Column. Waters BEH C18, 2.1×50 mm, 1.7-μm particles; Mobile Phase A: 5:95 acetonitrile:water with 10 mM ammonium acetate; Mobile Phase B: 95:5 acetonitrile:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient: 0-100% B over 4 minutes, then a 1-minute hold at 100% B; Flow: 0.83 mL/min.

E:

Column. Waters BEH C18, 2.1×50 mm, 1.7-μm particles; Mobile Phase A: 5:95 acetonitrile:water with 10 mM ammonium acetate; Mobile Phase B: 95:5 acetonitrile:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient: 0-100% B over 4 minutes, then a 1-minute hold at 100% B; Flow: 1 mL/min.

F:

Column. Waters BEH C18, 2.0×50 mm, 1.7-μm particles; Mobile Phase A: 5:95 methanol:water with 10 mM ammonium acetate; Mobile Phase B: 95:5 methanol:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient: 0.5 min hold at 0% B, 0-100% B over 4 minutes, then a 0.5-minute hold at 100% B;

Flow: 0.5 mL/min.

General Procedure for Parallel Synthesis of Oxalamides

Method 3

Step 1: To a solution of (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-(2-ethoxy-2-oxoacetamido)butanoate (1.0 g) in methanol (10 mL) was added Et 3 N (10.0 mL) at room temperature. The reaction mixture was heated to 55° C. for 24 hours. The solvent was concentrated in vacuo. The reaction mixture was diluted with water and acidified with 1.5; N HCl. The aqueous layer was extracted with ethylacetate (3×100 mL). The combined organic layer was dried over anhydrous Na 2 SO 4 , filtered and concentrated in vacuo to afford desired crude acid as white solid (850 mg).

Step 2: To a solution of (S)-2-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4-methoxy-4-oxobutylamino)-2-oxoacetic acid (20 mg) in DMF (1.0 mL) were added HCTU (17.91 mg) and DIPEA (16 μL) at rt and stirred for 15 minutes. Amine (1.2 eq.) was added to above solution and stirred at room temperature for 2 hour. Initial LCMS analysis showed formation of desired product. The solvent was evaporated and crude mixture was purified using preparative HPLC to afford desired product.

Step 3: To a solution of crude amide from step 2 in MeOH:H 2 O (5:1, 1.0 mL) was added K 2 CO 3 (8.3 mg) and stirred for 24 hours at room temperature. The crude mixture was purified using preparative HPLC to afford desired product.

General Procedure for Parallel Synthesis of Oxalamides

Method 4

Step 1: To a solution of (S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-ethoxy-2-oxoacetamido)propanoate (1.5 g) in methanol (15 mL) was added Et 3 N (15.0 mL) at room temperature. The reaction mixture was heated to 55° C. for 24 hours. The solvent was concentrated in vacuo. The reaction mixture was diluted with water and acidified with 1.5N HCl. The aqueous layer was extracted with ethylacetate (3×100 mL). The combined organic layer was dried over anhydrous Na 2 SO 4 , filtered and concentrated in vacuo to afford desired crude acid as white solid (1.35 g).

Step 2: To a solution of (S)-2-(2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-methoxy-3-oxopropylamino)-2-oxoacetic acid (20 mg) in DMF (1.0 mL) were added HCTU (17.91 mg) and DIPEA (16 μL) at room temperature and stirred for 15 minutes. Amine (1.2 eq.) was added to above solution and stirred at room temperature for 2 hours. Initial LCMS analysis showed formation of desired product. The solvent was evaporated and crude mixture was purified using preparative HPLC to afford desired product.

Step 3: To a solution of crude amide from step 2 in MeOH:H 2 O (5:1, 1.0 mL) was added K 2 CO 3 (8.3 mg) and stirred for 24 hours at room temperature. The crude mixture was purified using preparative HPLC to afford desired product.

Preparation of Compound 2001, 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-N-(2,2-dimethyl-3-(2-oxo-2-(pyrrolidin-1-yl)acetamido)propyl)-3-fluorobenzamide

›Step 1

To a solution of 2,4,6-trichloro-1,3,5-triazine (15 g) in THF (300 mL) was added 2,2,2-trifluoroethanol (8.14 g) and Hunig'sBase (15.63 mL). The resulting mixture was stirred for 16 hours. After removal of most THF and precipitate through a plug washing with THF, the filtrate was concentrate to give a crude that will be used as it is.

›Step 2

To a solution of the product in Step 1 above (1.47 g, 5.91 mmol) in THF (10 mL) was added methyl 4-amino-3-fluorobenzoate (1 g, 5.91 mmol) and Hunig'sBase (3.10 mL, 17.74 mmol). The resulting mixture was stirred for 16 h. The precipitate was filtered and washed with THF and water and dried to give 1.5 g of methyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoate as a solid.

›Step 3

To a solution of methyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoate (0.93 g, 2.45 mmol) in THF (10 mL) was added 1-(4-chlorophenyl)cyclopropanamine (0.5 g, 2.45 mmol) and Hunig's Base (1.71 mL, 9.8 mmol). The resulting mixture was refluxed at 80° C. for 16 hs. The precipitate was filtrated through a plug washing with THF to give a crude product that was purified by Biotage eluting with 4/1 to 3/2 hexane/ethyl acetate to give 1.2 g of methyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoro ethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoate as product.

›Step 4

To a solution of methyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoate (1.2 g, 2.34 mmol) in THF/water (1:1, 10 mL) was added LiOH (0.6 g, 25.0 mmol). The reaction mixture was refluxed at 80° C. for 7 hours. After cooling to room temperature, the reaction solution was acidified with 1N HCl. The product was extracted by EtOAc. The organic layer was washed with brine, dried over Na 2 SO 4 and concentrated under vacuum. The crude product 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoic acid was used directly in the next step.

›Step 5

To a solution of 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoic acid (200 mg, 0.42 mmol) in DCM (3 mL) was added tert-butyl 3-amino-2,2-dimethylpropylcarbamate (98 mg, 0.48 mmol), HATU (229 mg, 0.60 mol) and iPr 2 NEt (0.35 mL, 2.00 mmol). The mixture was stirred at r.t. for 16 hours before all the solvents were removed under vacuum. All solvents were removed under vacuum and the residue was purified by silica gel column (EtOAC/Hexanes=20% to 40%) to give tert-butyl 3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamido)-2,2-dimethylpropylcarbamate (270 mg, 100%) as a white solid.

›Step 6

tert-butyl 3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamido)-2,2-dimethylpropylcarbamate (270 mg, 0.40 mmol) was dissolved in 4 M HCl in dioxane (5 mL) solution. After being stirred at room temperature for 3 hours, the mixture was concentrated to give N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamide as crude product.

›Step 7 · 1 of 2

To a solution of N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamide (80 mg, 0.14 mmol) and 2-oxo-2-(pyrrolidin-1-yl)acetic acid (20 mg, 0.137 mmol) in DMF (2 mL) were added O-(benzotriazol-1-yl-N,N,N′,N′-tetramethyluronium tetrafluoroborate (66 mg, 0.21 mmol) and iPr 2 NEt (0.050 ml, 0.28 mmol). After stirring at rt for 16 hs, the mixture was purified by preparative HPLC to give 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-N-(2,2-dimethyl-3-(2-oxo-2-(pyrrolidin-1-yl)acetamido)propyl)-3-fluorobenzamide (14.4 mg, 14%) as product. 1 H NMR (400 MHz, CHLOROFORM-d) 8 ppm 1.01 (6H, s), 1.42 (4H, m), 1.81-2.02 (4H, m), 3.14 (2H, m), 3.29 (2H, d, J=6.0 Hz), 3.60 (2H, t, J=6.9 Hz), 3.91-4.12 (2H, m), 4.70-4.80 (2H, m), 7.14-7.38 (3H, m), 7.48-7.59 (1H, m), 7.69-7.80 (1H, m), 7.94-8.06 (1H, m), 8.24-8.31 (1H, m).

Preparation of Compound 2002, N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamido)-2,2-dimethylpropyl)-N2,N2-dimethyloxalamide

To a solution of N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamide (20 mg, 0.034 mmol) and 2-(dimethylamino)-2-oxoacetic acid (4.83 mg, 0.041 mmol) in DMF (1 mL) were added O-(benzotriazol-1-yl-N,N,N′,N′-tetramethyluronium tetrafluoroborate (16.5 mg, 0.052 mmol) and iPr 2 NEt (0.012 ml, 0.069 mmol). After stirring at rt for 16 hs, the mixture was purified by preparative HPLC to give N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamido)-2,2-dimethylpropyl)-N2,N2-dimethyloxalamide (13.8 mg, 56%) as product. 1 H NMR (400 MHz, CHLOROFORM-d) 8 ppm 1.03 (6H, s), 1.31-1.53 (4H, m), 3.06 (3H, s), 3.10-3.21 (2H, m), 3.29 (2H, d, J=6.0 Hz), 3.39 (3H, s), 4.75 (2H, m), 7.14-7.29 (3H, m), 7.33-7.48 (1H, m), 7.70-7.81 (1H, m), 7.92-8.04 (1H, m), 8.07-8.15 (1H, m).

Displacement of CF 3 CH 2 O moiety by benzyl alcohol:

A solution of N1-(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2,2-dimethylpropyl)-N2-(p-tolyl)oxalamide (520 mg) in THF was prepared. NaH (19.86 mg) and 500 μL of the N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2,2-dimethylpropyl)-N 2 -(p-tolyl)oxalamide solution was added into 16×48 mm each threaded vial containing an individual alcohol (5-10 eq.). Vials were capped and allowed to shake at room temperature for 3 days. Samples were blown down in the Zymark tabletop dryer at 35° C. for 2 hours and products were purified by preparative HPLC systems.

Method M=Column: Waters BEH C18, 2.0×50 mm, 1.7-μm particles; Mobile Phase A: 5:95 methanol:water with 10 mM ammonium acetate; Mobile

Phase B: 95:5 methanol:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient 0.5 min hold at 0% B, 0-100% B over 4 minutes, then a 0.5-minute hold at 100% B; Flow: 0.5 mL/min.

Method A=Column: Waters BEH C18, 2.0×50 mm, 1.7-μm particles; Mobile Phase A: 5:95

acetonitrile:water with 10 mM ammonium acetate; Mobile Phase B: 95:5

acetonitrile:water with 10 mM ammonium acetate; Temperature: 40° C.; Gradient: 0.5 min hold at 0% B, 0-100% B over 4 minutes, then a 0.5-minute hold at 100% B; Flow: 1 mL/min.

Preparation of 3827, N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-((4-isopropylbenzyl)oxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)-N 2 -(p-tolyl)oxalamide

To a suspension of (4-isopropylphenyl)methanol (24.46 mg) and NaH (5.92 mg) in THF (10 mL) was added N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)-N 2 -(p-tolyl)oxalamide (11 mg). The mixture was heated to reflux for 3 hours. The reaction was quenched by 5% NaHCO 3 /H 2 O and extracted with EtOAc (2×10 mL). The organic layers were combined, washed with brine (10 mL), dried over MgSO 4 and concentrated. The residue was purified by preparative HPLC system to give Compound 3827.

Preparations of 3828, 3829, 3830 and 3835

Compounds 3828, 3829, 3830 and 3835 were prepared under the same condition for the synthesis of Compound 3827, using N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)-N 2 -(4-methoxyphenyl)oxalamide, N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)-N 2 -(4-(trifluoromethyl)phenyl)oxalamide, N 1 -([1, 1′-biphenyl]-2-yl)-N 2 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-((4-isopropylbenzyl)oxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)oxalamide and N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-((4-isopropylbenzyl)oxy)-1,3,5-triazin-2-yl)amino)-2-fluorobenzamido)-2,2-dimethylpropyl)-N 2 -(2,4-difluorophenyl)oxalamide as starting materials.

Preparations of 3834 and 4003

Step 1: iPr 2 NEt (4 mL) was added into a solution of 2-(chloromethyl)-2-methyloxirane (0.745 g) and (2,4-dimethoxyphenyl)methanamine (2.338 g) in EtOH (20 mL). The reaction was stirred at room temperature for 16 hours, then 115° C. for 72 hours before being quenched by water. After removal of solvents under vacuum, the residue was purified by silica gel chromatography or preparative HPLC.

Step 2: iPr 2 NEt (0.5 mL) and HATU (238 mg) were added into the solution of 4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzoic acid (300 mg) and 1,3-bis((2,4-dimethoxybenzyl)amino)-2-methylpropan-2-ol (253 mg) in THF (10 mL). The reaction was stirred at room temperature for 24 hours. The product was isolated by silica gel chromatography.

Step 3: iPr 2 NEt (0.5 mL), HATU (21.93 mg) were added into the solution of 4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-N-(2,4-dimethoxybenzyl)-N-(3-((2,4-dimethoxybenzyl)amino)-2-hydroxy-2-methylpropyl)benzamide (50 mg) in THF (10 mL). The reaction was stirred at room temperature for 24 hours, before being quenched by NaHCO3 aqueous solution (10 mL). The aqueous phase was extracted by EtOAc (3×10 mL). The combined organic layer was dried over MgSO 4 and concentrated under vacuum to give a residue which was used as was.

›Step 7 · 2 of 2

Step 4: TFA (0.2 mL) was added into a solution of N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)-N-(2,4-dimethoxybenzyl)benzamido)-2-hydroxy-2-methylpropyl)-N 1 -(2,4-dimethoxybenzyl)oxalamide (50 mg) in CH 2 Cl 2 (2 mL). The reaction was stirred at room temperature for 24 hours, before all the solvents were removed under vacuum. The residue was purified by preparative HPLC system.

Preparation of 3838, N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2,2-bis(hydroxymethyl)propyl)oxalamide

Compound 3838 was prepared by using the same synthetic route of synthesizing 3834, using 2,2-bis(((2,4-dimethoxybenzyl)amino)methyl)propane-1,3-diol instead of 1,3-bis((2,4-dimethoxybenzyl)amino)-2-methylpropan-2-ol as one of the starting materials. And, 2,2-bis(((2,4-dimethoxybenzyl)amino)methyl)propane-1,3-diol was prepared by using the same procedure of synthesizing 1,3-bis((2,4-dimethoxybenzyl)amino)-2-methylpropan-2-ol by using 2,2-bis(bromomethyl)propane-1,3-diol rather than 2-(chloromethyl)-2-methyloxirane as one of the starting materials.

Preparations of 4004, N 2 -((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)-N 2 -(4-fluorophenyl)oxalamide and 4005, N 1 -((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)-N 2 -(cyclopropylmethyl)oxalamide

Step 1: iPr 2 NEt (0.5 mL) was added into a solution of tert-butyl (2-(aminomethyl)cyclopentyl)carbamate (300 mg) and ethyl 2-chloro-2-oxoacetate (191 mg) in THF (10 mL). The reaction was stirred at room temperature for 16 hours before being quenched by water. The aqueous layer was extracted with EtOAc (3×20 mL). The combined organic phase was dried over MgSO 4 and concentrated under vacuum to give the crude ethyl 2-(((2-((tert-butoxycarbonyl)amino)cyclopentyl)methyl)amino)-2-oxoacetate which was used as was.

Step 2: Ethyl 2-(((2-((tert-butoxycarbonyl)amino)cyclopentyl)methyl)amino)-2-oxoacetate (440 mg) in TFA (1 mL) and CH 2 Cl 2 (10 mL) was stirred at room temperature for 16 hours. After removal of solvents, the crude ethyl 2-(((2-aminocyclopentyl)methyl)amino)-2-oxoacetate was used as was.

Step 3: iPr 2 NEt (0.5 mL) was added into a solution of 4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzoic acid (300 mg), ethyl 2-(((2-aminocyclopentyl)methyl)amino)-2-oxoacetate (205 mg) and TBTU (201 mg) in THF (10 mL). The reaction was stirred at room temperature for 16 hours before being quenched by water. The aqueous layer was extracted with EtOAc (3×20 mL). The combined organic phase was dried over MgSO 4 and concentrated under vacuum to give the crude ethyl 2-(((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)amino)-2-oxoacetate which was used as was.

Step 4: A mixture of ethyl 2-(((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)amino)-2-oxoacetate (30 mg) and 4-fluoroaniline (49.3 mg) in EtOH (2 mL) was stirred at room temperature for 16 hours, then at 155° C. for 16 hours. Then, the product 4004 was isolated by preparative HPLC system.

Preparation of 4005, N 2 -((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)-N 2 -(cyclopropylmethyl)oxalamide

A mixture of ethyl 2-(((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)cyclopentyl)methyl)amino)-2-oxoacetate (30 mg) and cyclopropylmethanamine (31.6 mg) in EtOH (2 mL) was stirred at room temperature for 16 hours. Then, the product 4005 was isolated by preparative HPLC system.

Preparation of 3492, (R)-4-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-2-(2-((3-fluorophenyl)amino)-2-oxoacetamido)butanoic acid

Step 1: N,N-Di-iso-propylethylamine (0.054 g) and 2-(3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)-1,1,3,3-tetramethylisouronium hexafluorophosphate(V) (0.079 g) were added into a solution of 4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzoic acid (0.1 g) and (R)-4-amino-2-((tert-butoxycarbonyl)amino)butanoic acid (0.045 g) in DMF (1 mL). The reaction was stirred at room temperature for 16 hours and (R)-2-((tert-butoxycarbonyl)amino)-4-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)butanoic acid was isolated by using preparative HPLC system.

Step 2: TFA (0.340 mL) was added into a solution of (R)-2-((tert-butoxycarbonyl)amino)-4-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)butanoic acid (0.2 g) in DCM (1 mL). The reaction was stirred at room temperature for 2 hours. After removal of solvents, the residue was purified by preparative HPLC system.

Step 3: iPr 2 NEt (8.91 mg) and 2-(3H-[1,2,3]triazolo[4,5-b]pyridin-3-yl)-1,1,3,3-tetramethylisouronium hexafluorophosphate(V) (0.013 g) were added into a solution of (R)-2-amino-4-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)butanoic acid (0.020 g) and 2-((3-fluorophenyl)amino)-2-oxoacetic acid (6.32 mg) in DMF (1 mL). The reaction was stirred at room temperature for 1 hour and compound 3492 was isolated by using preparative HPLC system.

It will be evident to one skilled in the art that the present disclosure is not limited to the foregoing illustrative examples, and that it can be embodied in other specific forms without departing from the essential attributes thereof. It is therefore desired that the examples be considered in all respects as illustrative and not restrictive, reference being made to the appended claims, rather than to the foregoing examples, and all changes which come within the meaning and range of equivalency of the claims are therefore intended to be embraced therein.

›Tables in the description — 77
TABLE 2 — Type of Inhibitor or
Brand NamePhysiological ClassTargetSource Company
NIM811Cyclophilin InhibitorNovartis
ZadaxinImmuno-modulatorSciclone
SuvusMethylene blueBioenvision
ActilonTLR9 agonistColey
(CPG10101)
Batabulin (T67)Anticancerβ-tubulin inhibitorTularik Inc., South
San Francisco, CA
ISIS 14803AntiviralantisenseISIS
Pharmaceuticals Inc,
Carlsbad, CA/Elan
Phamaceuticals Inc.,
New York, NY
SummetrelAntiviralantiviralEndo
Pharmaceuticals
Holdings Inc.,
Chadds Ford, PA
GS-9132 (ACH-AntiviralHCV InhibitorAchillion/Gilead
806)
PyrazolopyrimidineAntiviralHCV InhibitorsArrow Therapeutics
compounds andLtd.
salts
From WO-
2005047288
May 26, 2005
LevovirinAntiviralIMPDH inhibitorRibapharm Inc.,
Costa Mesa, CA
MerimepodibAntiviralIMPDH inhibitorVertex
(VX-497)Pharmaceuticals
Inc., Cambridge,
MA
XTL-6865 (XTL-Antiviralmonoclonal antibodyXTL
002)Biopharmaceuticals
Ltd., Rehovot, Isreal
TelaprevirAntiviralNS3 serine proteaseVertex
(VX-950, LY-inhibitorPharmaceuticals
570310)Inc., Cambridge,
MA/Eli Lilly and
Co. Inc.,
Indianapolis, IN
HCV-796AntiviralNS5B ReplicaseWyeth/Viropharma
Inhibitor
NM-283AntiviralNS5B ReplicaseIdenix/Novartis
Inhibitor
GL-59728AntiviralNS5B ReplicaseGene Labs/
InhibitorNovartis
GL-60667AntiviralNS5B ReplicaseGene Labs/
InhibitorNovartis
2′C MeAAntiviralNS5B ReplicaseGilead
Inhibitor
PSI 6130AntiviralNS5B ReplicaseRoche
Inhibitor
R1626AntiviralNS5B ReplicaseRoche
Inhibitor
2′C MethylAntiviralNS5B ReplicaseMerck
adenosineInhibitor
JTK-003AntiviralRdRp inhibitorJapan Tobacco Inc.,
Tokyo, Japan
LevovirinAntiviralribavirinICN
Pharmaceuticals,
Costa Mesa, CA
RibavirinAntiviralribavirinSchering-Plough
Corporation,
Kenilworth, NJ
ViramidineAntiviralRibavirin ProdrugRibapharm Inc.,
Costa Mesa, CA
HeptazymeAntiviralribozymeRibozyme
Pharmaceuticals
Inc., Boulder, CO
BILN-2061Antiviralserine proteaseBoehringer
inhibitorIngelheim Pharma
KG, Ingelheim,
Germany
SCH 503034Antiviralserine proteaseSchering Plough
inhibitor
ZadazimImmune modulatorImmune modulatorSciClone
Pharmaceuticals
Inc., San Mateo, CA
CepleneImmunomodulatorimmune modulatorMaxim
Pharmaceuticals
Inc., San Diego, CA
CellCeptImmunosuppressantHCV IgG immuno-F. Hoffmann-La
suppressantRoche LTD, Basel,
Switzerland
CivacirImmunosuppressantHCV IgG immuno-Nabi
suppressantBiopharmaceuticals
Inc., Boca Raton, FL
Albuferon-αInterferonalbumin IFN-α2bHuman Genome
Sciences Inc.,
Rockville, MD
Infergen AInterferonIFNInterMune
alfacon-1Pharmaceuticals
Inc., Brisbane, CA
Omega IFNInterferonIFN-ωIntarcia Therapeutics
IFN-β and EMZ701InterferonIFN-β and EMZ701Transition
Therapeutics Inc.,
Ontario, Canada
RebifInterferonIFN-β1aSerono, Geneva,
Switzerland
Roferon AInterferonIFN-α2aF. Hoffmann-La
Roche LTD, Basel,
Switzerland
Intron AInterferonIFN-α2bSchering-Plough
Corporation,
Kenilworth, NJ
Intron A andInterferonIFN-α2b/α1-thymosinRegeneRx
ZadaxinBiopharma. Inc.,
Bethesda, MD/
SciClone
Pharmaceuticals Inc,
San Mateo, CA
RebetronInterferonIFN-α2b/ribavirinSchering-Plough
Corporation,
Kenilworth, NJ
ActimmuneInterferonINF-γInterMune Inc.,
Brisbane, CA
Interferon-βInterferonInterferon-β-1aSerono
MultiferonInterferonLong lasting IFNViragen/
Valentis
WellferonInterferonLympho-blastoid IFN-GlaxoSmithKline
αn1plc, Uxbridge, UK
OmniferonInterferonnatural IFN-αViragen Inc.,
Plantation, FL
PegasysInterferonPEGylated IFN-α2aF. Hoffmann-La
Roche LTD, Basel,
Switzerland
Pegasys andInterferonPEGylated IFN-α2a/Maxim
Cepleneimmune modulatorPharmaceuticals
Inc., San Diego, CA
Pegasys andInterferonPEGylated IFN-F. Hoffmann-La
Ribavirinα2a/ribavirinRoche LTD, Basel,
Switzerland
PEG-IntronInterferonPEGylated IFN-α2bSchering-Plough
Corporation,
Kenilworth, NJ
PEG-Intron/InterferonPEGylated IFN-Schering-Plough
Ribavirinα2b/ribavirinCorporation,
Kenilworth, NJ
IP-501Liver protectionantifibroticIndevus
Pharmaceuticals
Inc., Lexington, MA
IDN-6556Liver protectioncaspase inhibitorIdun
Pharmaceuticals
Inc., San Diego, CA
ITMN-191 (R-7227)Antiviralserine proteaseInterMune
inhibitorPharmaceuticals
Inc., Brisbane, CA
GL-59728AntiviralNS5B ReplicaseGenelabs
Inhibitor
ANA-971AntiviralTLR-7 agonistAnadys
BoceprevirAntiviralserine proteaseSchering Plough
inhibitor
TMS-435Antiviralserine proteaseTibotec BVBA,
inhibitorMechelen, Belgium
BI-201335Antiviralserine proteaseBoehringer
inhibitorIngelheim Pharma
KG, Ingelheim,
Germany
MK-7009Antiviralserine proteaseMerck
inhibitor
PF-00868554Antiviralreplicase inhibitorPfizer
ANA598AntiviralNon-NucleosideAnadys
NS5B PolymerasePharmaceuticals,
InhibitorInc., San Diego, CA,
USA
IDX375AntiviralNon-NucleosideIdenix
Replicase InhibitorPharmaceuticals,
Cambridge, MA,
USA
BILB 1941AntiviralNS5B PolymeraseBoehringer
InhibitorIngelheim Canada
Ltd R&D, Laval,
QC, Canada
PSI-7851AntiviralNucleosidePharmasset,
Polymerase InhibitorPrinceton, NJ, USA
PSI-7977AntiviralNucleotide NS5BPharmasset,
Polymerase InhibitorPrinceton, NJ, USA
VCH-759AntiviralNS5B PolymeraseViroChem Pharma
Inhibitor
VCH-916AntiviralNS5B PolymeraseViroChem Pharma
Inhibitor
GS-9190AntiviralNS5B PolymeraseGilead
Inhibitor
Peg-interferonAntiviralInterferonZymoGenetics/Bristol-
lamdaMyers Squibb
tert-butyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)benzoate
MS (M + H) + Calcd.405.1
MS (M + H) + Observ.405.0
LC Condition
Solvent A100% Water-0.1% TFA
Solvent B100% ACN-0.1% TFA
Start % B2
Final % B98
Gradient Time1.6 min
Stop Time1.8 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN-H 2 O-0.1% TFA
ColumnAquity UPLC BEH C18 1.7 um
tert-butyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzoate
MS (M + H) + Calcd.536.2
MS (M + H) + Observ.536.0
LC Condition
Solvent A100% Water-0.1% TFA
Solvent B100% ACN-0.1% TFA
Start % B2
Final % B98
Gradient Time1.6 min
Stop Time1.8 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN-H 2 O-0.1% TFA
ColumnAquity UPLC BEH C18 1.7 um
4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzoic acid, In-1001
MS (M + H) + Calcd.480.1
MS (M + H) + Observ.480.1
LC Condition
Solvent A100% Water-0.1% TFA
Solvent B100% ACN-0.1% TFA
Start % B2
Final % B98
Gradient Time1.6 min
Stop Time1.8 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN-H 2 O-0.1% TFA
ColumnAquity UPLC BEH C18 1.7 um
(S)-methyl 3-(tert-butoxycarbonylamino)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2- ylamino)benzamido)propanoate
MS (M + H) + Calcd.680.2
MS (M + H) + Observ.680.3
Retention Time3.44 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 50 × 2, 3 u
(S)-methyl 3-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)propanoate, In-1002
MS (M + H) + Calcd.580.2
MS (M + H) + Observ.580.0
Retention Time1.35 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
(S)-methyl 4-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)butanoate:
MS (M + H) + Calcd.594.2
MS (M + H) + Observ.594.4
Retention Time1.64 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex LUNA C18, 30 × 2, 3u
(S)-methyl 5-amino-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)pentanoate, In-1004
MS (M + H) + Calcd.608.2
MS (M + H) + Observ.608.1
Retention Time2.44
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
tert-butyl 3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)- 6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)- benzamido)-2,2-dimethylpropylcarbamate
MS (M + H) + Calcd.664.3
MS (M + H) + Observ.664.4
Retention Time3.75 min
LC Condition
Solvent A5% ACN:95% Water:10 mM
Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM
Ammonium Actetate
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex LUNA C18, 50 × 2, 3 u
N-(3-amino-2,2-dimethylpropy1)-4-(4-(1-(4-
chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-
1,3,5-triazin-2-ylamino)benzamide, In-1005
MS (M + H) + Calcd.564.2
MS (M + H) + Observ.564.3
Retention Time3.02 min
LC Condition
Solvent A5% ACN:95% Water:10 mM
Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM
Ammonium Actetate
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex LUNA C18, 50 × 2, 3 u
In-1006
MS (M + H) + Calcd.582.2
MS (M + H) + Observ.582.2
Retention Time1.74 min
LC Condition
Solvent A90% Water-10% Methanol-0.l% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3-(2-ethoxy-2- oxoacetamido)propanoate, 1001
MS (M + H) + Calcd.680.2
MS (M + H) + Observ.680.1
Retention Time3.16 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzamido)propanoate, 1002
MS (M + H) + Calcd.651.2
MS (M + H) + Observ.651.0
Retention Time3.61 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B40
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3- (2-(methylamino)-2-oxoacetamido)propanoate, 1003
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.1
Retention Time4.26 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3- (2-(dimethylamino)-2-oxoacetamido)propanoate, 1004
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.1
Retention Time3.61 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B40
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)- cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzamido)propanoic acid, 1005
MS (M + H) + Calcd.637.2
MS (M + H) + Observ.637.0
Retention Time2.83 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B60
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 3-(2-(methylamino)-2-oxoacetamido)propanoic acid, 1006
MS (M + H) + Calcd.651.2
MS (M + H) + Observ.651.1
Retention Time3.01 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B60
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 3-(2-(dimethylamino)-2-oxoacetamido)propanoic acid, 1007
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.1
Retention Time3.10 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B60
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropy1)-N2,N2-dimethyloxalamide, 1008
MS (M + H) + Calcd.663.2
MS (M + H) + Observ.663.1
Retention Time2.00 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate5 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 4.6 × 50 mm S10
3335
MS (M + H) + Calcd.715.2
MS (M + H) + Observ.715.1
Retention Time4.48 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
3360
MS (M + H) + Calcd.701.2
MS (M + H) + Observ.701.0
Retention Time4.42 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
3365
MS (M + H) + Calcd.717.2
MS (M + H) + Observ.717.2
Retention Time4.42 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
3373
MS (M + H) + Calcd.687.2
MS (M + H) + Observ.687.0
Retention Time4.40 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
3395
MS (M + H) + Calcd.715.2
MS (M + H) + Observ.715.3
Retention Time1.89 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3412
MS (M + H) + Calcd.729.2
MS (M + H) + Observ.729.3
Retention Time1.87 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3418
MS (M + H) + Calcd.715.2
MS (M + H) + Observ.715.3
Retention Time2.01 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3448
MS (M + H) + Calcd.715.2
MS (M + H) + Observ.715.5
Retention Time2.36 min
LC Condition
Solvent A90% Water -10% Methanol-0.1% TFA
Solvent B10% Water -90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
3482
MS (M + H) + Calcd.741.2
MS (M + H) + Observ.741.3
Retention Time1.89 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3499
MS (M + H) + Calcd.745.2
MS (M + H) + Observ.745.3
Retention Time3.18 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 50 × 2, 3 u
(S)-methyl 4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)benzamido)butanoate, 1009
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.1
Retention Time3.61 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(methylamino)-2-oxoacetamido)butanoate, 1010
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.1
Retention Time3.57 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(dimethylamino)-2-oxoacetamido)butanoate, 1011
MS (M + H) + Calcd.693.2
MS (M + H) + Observ.693.1
Retention Time3.53 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2- ylamino)benzamido)pentanoate, 1012
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.1
Retention Time3.64 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)- cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino) benzamido)butanoic acid, 1013
MS (M + H) + Calcd.651.2
MS (M + H) + Observ.651.1
Retention Time3.53 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(methylamino)-2-oxoacetamido)butanoic acid, 1014
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.2
Retention Time3.47 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(dimethylamino)-2-oxoacetamido)butanoic acid, 1015
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.2
Retention Time3.41 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4-chlorophenyl)- cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2- ylamino)benzamido)pentanoic acid,1016
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.1
Retention Time3.48 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
tert-Butyl 3-(1-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-2-methoxy-2- oxoethyl)piperidine-1-carboxylate
MS (M + H) + Calcd.734.2
MS (M + H) + Observ.734.1
Retention Time4.00 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
Methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2-(piperidin-3-yl)acetate
MS (M + H) + Calcd.634.2
MS (M + H) + Observ.634.1
Retention Time2.60 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
methyl 2-(1-(2-amino-2-oxoacetyl)piperidin-3-y1)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzamido)acetate, 1017
MS (M + H) + Calcd.705.2
MS (M + H) + Observ.705.1
Retention Time3.72 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
2-(1-(2-amino-2-oxoacetyl)piperidin-3-yl)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)benzamido)acetic acid, 1018
MS (M + H) + Calcd.691.2
MS (M + H) + Observ.691.1
Retention Time3.74 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
N-(1-(1-(2-amino-2-oxoacetyl)piperidin-3-yl)-2-oxo-2- (propylamino)ethyl)-4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamide, 1019
MS (M + Na) + Calcd.754.2
MS (M + Na) + Observ.754.2
Retention Time3.65 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 3-amino-2-(4-(4-(1-(4-chlorophenyl)- cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin- 2-ylamino)benzamido)propanoate
MS (M + Na) + Calcd.594.2
MS (M + Na) + Observ.594.2
Retention Time3.38 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3- (2-(dimethylamino)-2-oxoacetamido)propanoate, 1020
MS (M + H) + Calcd.693.2
MS (M + H) + Observ.693.2
Retention Time3.89 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-isopropyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 3-(2-(dimethylamino)-2-oxoacetamido)propanoate, 1021
MS (M + H) + Calcd.707.2
MS (M + H) + Observ.707.2
Retention Time4.03 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-morpholinoethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)- 6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3- (2-(dimethylamino)-2-oxoacetamido)propanoate, 1022
MS (M + H) + Calcd.778.3
MS (M + H) + Observ.778.3
Retention Time3.22 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-2-(2-hydroxyethoxy)ethyl 2-(4-(4-(1-(4-chlorophenyl)- cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)- benzamido)-3-(2-(dimethylamino)-2-oxoacetamido)propanoate, 1023
MS (M + H) + Calcd.753.2
MS (M + H) + Observ.753.3
Retention Time3.64 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
((S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-3- (2-(methylamino)-2-oxoacetamido)propanoate, 1024
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.1
Retention Time3.93 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 3-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)benzamido)propanoate, 1025
MS (M + H) + Calcd.665.2
MS (M + H) + Observ.665.1
Retention Time3.78 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater -Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
Compound 1552
MS (M + H) + Calcd.635.2
MS (M + H) + Observ.635.5
Retention Time1.83 min
LC Condition
Solvent A5% ACN: 95% Water: 10 mM
Ammonium Actetate
Solvent B95% ACN: 5% Water: 10 mM
Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN: Water: Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3u
(S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(dimethylamino)-2-oxoacetamido)butanoate, 1026
MS (M + H) + Calcd.707.2
MS (M + H) + Observ.707.1
Retention Time3.60 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-4- (2-(methylamino)-2-oxoacetamido)butanoate, 1027
MS (M + H) + Calcd.693.2
MS (M + H) + Observ.693.1
Retention Time3.72 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 4-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzamido)butanoate, 1028
MS (M + H) + Calcd.679.2
MS (M + H) + Observ.679.1
Retention Time3.56 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 5-(2-amino-2-oxoacetamido)-2-(4-(4-(1-(4- chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)benzamido)pentanoate, 1029
MS (M + H) + Calcd.693.2
MS (M + H) + Observ.693.1
Retention Time3.54 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5- (2-(methylamino)-2-oxoacetamido)pentanoate
MS (M + H) + Calcd.693.2
MS (M + H) + Observ.693.1
Retention Time3.54 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5- (2-(methylamino)-2-oxoacetamido)pentanoate, 1030
MS (M + H) + Calcd.707.2
MS (M + H) + Observ.707.1
Retention Time3.68 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-methyl 2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)-5- (2-(dimethylamino)-2-oxoacetamido)pentanoate
MS (M + H) + Calcd.707.2
MS (M + H) + Observ.707.1
Retention Time3.44 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
(S)-ethyl 2-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)-5- (2-(dimethylamino)-2-oxoacetamido)pentanoate, 1031
MS (M + H) + Calcd.721.2
MS (M + H) + Observ.721.1
Retention Time3.70 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
cyclopropylmethyl 2-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)- 6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropylamino)-2-oxoacetate, 1032
MS (M + Na) + Calcd.712.2
MS (M + Na) + Observ.712.2
Retention Time2.38 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropyl)-N2-cycloheptyloxalamide, 1033
MS (M + H) + Calcd.731.3
MS (M + H) + Observ.731.4
Retention Time2.53 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropyl)-N2-(2,4-difluorobenzyl)oxalamide, 1034
MS (M + H) + Calcd.761.2
MS (M + H) + Observ.761.3
Retention Time2.47 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropyl)-N2-phenyloxalamide, 1035
MS (M + H) + Calcd.711.2
MS (M + H) + Observ.711.3
Retention Time2.45 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)benzamido)- 2,2-dimethylpropyl)-N2-((1-(pyrrolidin- 1-ylmethyl)cyclopropyl)methyl)oxalamide, 1036
MS (M + H) + Calcd.772.3
MS (M + H) + Observ.772.4
Retention Time2.11 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
Compound 1465
MS (M + H) + Calcd.741.2
MS (M + H) + Observ.741.5
Retention Time2.07 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 1492
MS (M + H) + Calcd.727.3
MS (M + H) + Observ.727.2
Retention Time2.09 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B50
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
Compound 3388
MS (M + H) + Calcd.653.2
MS (M + H) + Observ.653.0
Retention Time2.11 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B30
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 30 mm 3 um
methyl 4-(4-chloro-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin- 2-ylamino)-3-fluorobenzoate
MS (M + H) + Calcd.381.7
MS (M + H) + Observ.381.0
Retention Time1.0 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
methyl 4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzoate
MS (M + H) + Calcd.512.9
MS (M + H) + Observ.512.1
Retention Time1.10 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)-3-fluorobenzoic acid
MS (M + H) + Calcd.498.8
MS (M + H) + Observ.498.0
Retention Time1.00 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
tert-butyl 3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6- (2,2,2-trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3- fluorobenzamido)-2,2-dimethylpropylcarbamate
MS (M + H) + Calcd.683.1
MS (M + H) + Observ.682.3
Retention Time1.15 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
N-(3-amino-2,2-dimethylpropyl)-4-(4-(1-(4-chlorophenyl) cyclopropylamino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-ylamino)-3-fluorobenzamide
MS (M + H) + Calcd.583.0
MS (M + H) + Observ.582.2
Retention Time0.92 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-ylamino)-N-(2,2-dimethyl-3-(2-oxo-2-(pyrrolidin-l- yl)acetamido)propyl)-3-fluorobenzamide
MS (M + H) + Calcd.708.1
MS (M + H) + Observ.707.3
Retention Time1.07 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
ColumnAcquity UPLC BEH C18 1.7 uM
N1-(3-(4-(4-(1-(4-chlorophenyl)cyclopropylamino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-ylamino)-3-fluorobenzamido)-2, 2-dimethylpropyl)-N2,N2-dimethyloxalamide
MS (M + H) + Calcd.682.1
MS (M + H) + Observ.681.3
Retention Time1.02 min
LC Condition
Solvent A100% Water:0.05% TFA
Solvent B100% ACN:0.05% TFA
Start % B2
Final % B98
Gradient Time2.2 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairACN:Water:TFA
Compound 3827
MS (M + H) + Calcd.793.3
MS (M + H) + Observ.793.4
Retention Time2.38 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3828
MS (M + H) + Calcd.809.3
MS (M + H) + Observ.809.3
Retention Time2.32 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3829
MS (M + H) + Calcd.847.3
MS (M + H) + Observ.847.3
Retention Time2.44 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3830
MS (M + H) + Calcd.855.4
MS (M + H) + Observ.855.3
Retention Time2.51 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
3835
MS (M + H) + Calcd.815.3
MS (M + H) + Observ.815.3
Retention Time2.29 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3u
1,3-bis((2,4-dimethoxybenzyl)amino)-2-methylpropan-2-ol
MS (M + H) + Calcd.405.2
MS (M + H) + Observ.405.2
Retention Time2.79 min
LC Condition
Solvent A90% Water-10% Methanol-0.1% TFA
Solvent B10% Water-90% Methanol-0.1% TFA
Start % B0
Final % B100
Gradient Time4 min
Flow Rate0.8 mL/min
Wavelength220
Solvent PairWater-Methanol-TFA
ColumnPHENOMENEX-LUNA 2.0 × 50 mm 3 um
4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5- triazin-2-yl)amino)-N-(2,4-dimethoxybenzyl)-N-(3-((2,4- dimethoxybenzyl)amino)-2-hydroxy-2-methylpropyl)benzamide
MS (M + H) + Calcd.866.3
MS (M + H) + Observ.866.3
Retention Time2.01 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
N 1 -(3-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)- 1,3,5-triazin-2-yl)amino)-N-(2,4-dimethoxybenzyl)benzamido)-2-hydroxy-2- methylpropyl)-N 1 -(2,4-dimethoxybenzyl)oxalamide
MS (M + H) + Calcd.937.3
MS (M + H) + Observ.937.3
Retention Time1.93 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 3834
MS (M + H) + Calcd.637.2
MS (M + H) + Observ.637.1
Retention Time1.58 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 4003
MS (M + H) + Calcd.619.2
MS (M + H) + Observ.619.1
Retention Time1.72 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 3838
MS (M + H) + Calcd.667.2
MS (M + H) + Observ.667.3
Retention Time1.55 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
ethyl 2-(((2-aminocyclopentyl)methyl)amino)-2-oxoacetate
MS (M + H) + Calcd.215.1
MS (M + H) + Observ.215.2
Retention Time0.65 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
ethyl 2-(((2-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2- yl)amino)benzamido)cyclopentyl)methyl)amino)-2-oxoacetate
MS (M + H) + Calcd.676.2
MS (M + H) + Observ.676.4
Retention Time1.82 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 4004
MS (M + H) + Calcd.741.2
MS (M + H) + Observ.741.5
Retention Time2.09 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 4005
MS (M + H) + Calcd.701.3
MS (M + H) + Observ.701.5
Retention Time1.98 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium
Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium
Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
(R)-2-((tert-butoxycarbonyl)amino)-4-(4-((4-((1-(4- chlorophenyl)cyclopropyl)amino)-6-(2,2,2-trifluoroethoxy)-1,3,5-triazin-2- yl)amino)benzamido)butanoic acid
MS (M + H) + Calcd.680.2
MS (M + H) + Observ.680.2
Retention Time1.55 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
(R)-2-amino-4-(4-((4-((1-(4-chlorophenyl)cyclopropyl)amino)-6-(2,2,2- trifluoroethoxy)-1,3,5-triazin-2-yl)amino)benzamido)butanoic acid
MS (M + H) + Calcd.580.2
MS (M + H) + Observ.580.2
Retention Time1.52 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u
Compound 3492
MS (M + H) + Calcd.745.2
MS (M + H) + Observ.745.2
Retention Time1.61 min
LC Condition
Solvent A5% ACN:95% Water:10 mM Ammonium Actetate
Solvent B95% ACN:5% Water:10 mM Ammonium Actetate
Start % B0
Final % B100
Gradient Time2 min
Flow Rate1 mL/min
Wavelength220
Solvent PairACN:Water:Ammonium Actetate
ColumnPhenomenex Luna C18, 30 × 2, 3 u

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Classifications

12 codes
IPC · International Patent Classification
Section A — Human necessities
  • A61P31/14
  • A61K31/53
Section C — Chemistry; metallurgy
  • C07D417/12
  • C07D403/12
  • C07D401/14
  • C07D513/04
  • C07D405/12
  • C07D251/52
  • C07D413/12
  • C07D401/12
USPC · US Patent Classification
544/212514/245

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⤢ drag to zoomJan 2013Apr 2013Jul 2013Oct 2013Jan 2014Apr 2014Jul 2014Oct 2014Jan 2015USPTOApplicantNon-final rejectionResponse after non-final
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Venkataraman Balasubramanian
art unit 1624 · TC 1600
Citations: 20 back · 2 forward

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